Calonectris borealis (Cory's shearwater): 142092490
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Entry
142092490 CDS
T11211
Name
(RefSeq) ATP-dependent RNA helicase DDX19B isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03013
Nucleocytoplasmic transport
cbor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142092490
03015 mRNA surveillance pathway
142092490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbor03019
]
142092490
Enzymes [BR:
cbor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
142092490
Messenger RNA biogenesis [BR:
cbor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
142092490
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
142092490
NCBI-ProteinID:
XP_075028710
LinkDB
All DBs
Position
23
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AA seq
479 aa
AA seq
DB search
MATDSWALAVDEQEAAAESLSSLHLKEEKTKPDANGAVVKADDNVEKTEDEEKEDRAAQS
LLNKLIRSNLVDTTNQVEVLQRDPTSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQE
NALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPGNKYPQCLCLSPTYELALQTGK
VIEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFV
LDEADVMIATQGHQDQSIRIQRMLPRDCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKRE
EETLDTIKQYYVLCNNRDEKFQALCNIYGAITIAQAMIFCHTRKTASWLAAELSKEGHQV
ALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAINMVDSKHSMNILNRIQEHFNKKINKLDTDDLDEIEKITN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactcctgggccctggccgtggacgagcaggaggcggcggccgagtcgttg
agcagtttacacctgaaggaggaaaaaaccaaaccagatgccaatggtgctgttgtcaag
gcagatgacaacgtagagaagacggaagatgaggagaaggaggacagagctgcgcagtcc
ttgttgaacaagctaatccgcagtaacttggttgacacaacaaatcaagtggaggtgctg
cagagggatcccacatcgcctctctactccgtgaaatcttttgaggagctgcgactgaaa
ccacagctcctgcaaggagtctatgccatgggcttcaacagaccatctaagatacaagag
aatgccctgcccatgatgcttgctgaacccccacagaacttgatcgcacaatctcagtcc
ggtactggcaagacggctgcctttgtcctggccatgctcagtcgtgttgaacctgggaac
aagtacccacagtgtttgtgcctttccccaacatacgagctggcacttcaaacaggaaaa
gtgattgaacagatgggaaagttttatccagagctgaaacttgcttatgctgtccgaggc
aataaattggagagaggtcagaagatctctgagcagattgtaatcggcacacccggcact
gtgctggactggtgttccaaactgaaattcatagatcccaagaaaatcaaagtgtttgtc
ttggatgaggctgacgtgatgatagcaacccagggccatcaggaccagagcatccgcatt
cagagaatgctccccagggactgccagatgcttctgttttcagccacttttgaggattct
gtgtggaagtttgctcaaaaagttgttcctgacccaaacattatcaaactgaagcgagag
gaggagacactggacactattaagcagtattatgttctgtgcaataacagagatgagaag
ttccaggctctctgtaatatctacggcgccatcaccattgcccaggccatgatcttctgc
catactcggaagacggccagctggctggcggcggagctctcgaaggaaggccatcaggtg
gcattgctcagtggggaaatgatggtggaacagagagccgcggtgatagagcgtttccga
gagggcaaagaaaaggtgctggtgaccacaaacgtctgtgccagagggatcgatgtagag
caggtctctgttgttatcaattttgaccttcctgtggataaagatggaaatccagataat
gagacttacctgcaccggattggacgtacaggtcgctttggcaagcgaggactggctatt
aacatggtggacagcaagcacagcatgaatattctcaacagaatccaggaacatttcaac
aaaaagataaacaaattggatactgacgacttggatgaaattgagaagataactaactga
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