Calonectris borealis (Cory's shearwater): 142092636
Help
Entry
142092636 CDS
T11211
Symbol
NCAM1
Name
(RefSeq) neural cell adhesion molecule 1 isoform X1
KO
K06491
neural cell adhesion molecule
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
cbor04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
142092636 (NCAM1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
142092636 (NCAM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbor04131
]
142092636 (NCAM1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cbor04515
]
142092636 (NCAM1)
04090 CD molecules [BR:
cbor04090
]
142092636 (NCAM1)
00536 Glycosaminoglycan binding proteins [BR:
cbor00536
]
142092636 (NCAM1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cbor00537
]
142092636 (NCAM1)
04091 Lectins [BR:
cbor04091
]
142092636 (NCAM1)
Membrane trafficking [BR:
cbor04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
142092636 (NCAM1)
Cell adhesion molecules [BR:
cbor04515
]
Immunoglobulin superfamily
NCAM1/2
142092636 (NCAM1)
CD molecules [BR:
cbor04090
]
Proteins
142092636 (NCAM1)
Glycosaminoglycan binding proteins [BR:
cbor00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
142092636 (NCAM1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cbor00537
]
Others
142092636 (NCAM1)
Lectins [BR:
cbor04091
]
I-type lectins (Siglecs)
142092636 (NCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
fn3
Ig_DSCAM-DSCAML_C
C2-set_2
C1-set
C2-set_3
V-set_CD47
Pur_ac_phosph_N
Calycin_like
Motif
Other DBs
NCBI-GeneID:
142092636
NCBI-ProteinID:
XP_075028964
LinkDB
All DBs
Position
24:complement(1744171..1898207)
Genome browser
AA seq
1119 aa
AA seq
DB search
MLLATVLPWTLFLLGAAASLQVDIVPSQGEISVGESKFFLCQVAGEAKYKDIFWFSPNGE
KLTPNQQRISVVRNDDFSSTLTIYNANIDDAGIYKCVVSSVEEEDSEATVNVKIFQKLMF
KNAPTPQEFKEGDDAVVVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIK
KTDEGTYRCEGRILARGEIDFKDIQVIVNVPPSVRARQSTMNATANLSQAVTLACDADGF
PEPTMTWTKDGEPIEQADDAEKYSFNYDGSELIIKKVDKSDEAEYICIAENKAGEQDATI
HLKVFAKPKITYVENKTAMELEDQITLTCEASGDPIPSITWRTSTRNISNEEKASWTRPE
KQETLDGRIVVRSHARVSSLTLKEIQYTDAGEYVCTASNTIGQDSQAMYLEVQYAPKLQG
PVAVYTWEGNQVNITCEVFAYPSAVISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDS
ENDFGNYNCTAVNRIGQESSEFILVQADTPSSPSIDRVEPYSSTAQVEFDEPEATGGVPI
LKYKAEWKALGEGEWHSRLYDAKEANVEGMITITGLKPETTYSLRLSAVNGKGVGEISLP
SDFKTQPVREPSAPKLEGQMGEDGNSIKVNVIKQDDGGSPIRHYLIKYKAKHSSEWKPEI
RLPSGSDHVMLKSLDWNAEYEVYVIAENQQGKSKPAHYAFRTSAQPTVIPASTSPTSGLG
TAAIVGILIVIFVLLLVAVDVTCYFLNKCGLLMCIAVNLCGKSGPGAKGKDMEEGKAAFS
KDESKEPIVEVRTEEERTPNHDGGKHTEPNETTPLTEPEHPADTAATVEDMLPSVTTGTT
NSDTITETFATAQNSPTSETTTLTSSIALPATAIPDSNSMSPGQATPVKGAATSVSSPPP
SSTPKVAPLVDLSDTPSSTPATNNLSSSVLSSQGAVLSPSAVANVAEISKVAGGNKPAAP
SPANLTSPPVPSEPKQEVSSTKSPEKEAVQPSTVKSPTETTKNPSNLKSEAASGSTTNPS
QNEDFKMDEGTFKTPDIDLAKDVFAALGTTTPASVTSGQARELAASTADSSVPAAPAKTE
KIPVEDKSEVQATETKTPPAEVKTVPNEATQTNENESKA
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgctgctagccactgtgctgccctggacgttgtttttgcttggagctgcagcctctcta
caagtggacattgttccaagccagggggagatcagcgttggagaatctaagttcttctta
tgtcaagtggcaggggaggccaaatacaaagacattttctggttttcccctaatggtgag
aagctgacgccgaaccaacagcgcatctcagtggtgcgaaatgatgacttctcttccacc
ctcaccatctacaacgccaacatagatgatgctggcatctataaatgtgttgtcagtagc
gtggaggaggaagactccgaggccaccgtcaatgtgaaaattttccaaaagctgatgttc
aagaatgctcccactcctcaggaattcaaggaaggggatgatgctgtggttgtgtgtgat
gtggtcagttcactgcctcctaccatcatctggaagcacaaaggcagggatgttatccta
aaaaaagatgttcgatttatagtcctgtccaacaactacctgcagatccggggaatcaag
aaaacagatgaagggacataccgctgtgagggccggatcttggctcgtggggagatcgac
ttcaaagatattcaggtcatcgtaaatgtacctccttctgtgcgtgccaggcagagcact
atgaatgccactgccaacctcagccaggctgtcaccttagcatgtgatgctgatggcttt
cctgagccaaccatgacgtggacgaaggatggagagccaatagaacaggccgatgatgca
gagaaatacagttttaactacgatggttccgagctcatcatcaagaaggtggataagagt
gatgaagcagaatacatctgcatcgctgagaacaaggctggcgagcaggatgccaccatt
catctcaaagtctttgcaaaacccaaaatcacctatgtggagaataaaacagccatggag
ctggaggatcagattacactgacctgtgaggcatctggggacccaatcccttccatcact
tggaggacttccacccggaacatcagcaatgaagagaaggcttcgtggacccggcccgag
aaacaagagactctggatggacgcatcgtagtacgtagccatgcccgggtgtcatctctc
actctcaaagaaattcagtacacagatgctggagaatatgtatgcacagccagcaacacc
attgggcaggactcccaagccatgtaccttgaagtgcagtatgcccccaagcttcagggc
cctgtggctgtctatacttgggaagggaatcaagtgaacatcacctgtgaggtatttgct
taccccagtgctgtcatctcctggttccgggatgggcagctgcttcccagctcaaactac
agcaatatcaagatctacaacactccatcagcaagctacctggaggtgacaccagactct
gaaaatgactttgggaactataactgcactgctgtgaaccgcattggccaggagtcctca
gagttcattcttgtgcaggcagatactccgtcctctccttccattgacagagtggagccc
tattccagtactgcccaggtggagtttgatgagcctgaagctaccggtggggtgcccatc
ctcaagtacaaagcagagtggaaggcactgggcgagggagaatggcattcaaggttatat
gatgcaaaagaagcaaatgtggagggcatgatcacgatcactggcctgaaacctgaaaca
acctactctctgagattgtctgcggtcaatggcaagggtgtgggtgagattagcctgcca
tccgacttcaagacacaaccagttcgagaacccagcgcacccaaactggaaggtcagatg
ggagaagatggaaactccattaaagtgaacgttatcaagcaggatgatggtggctcccca
attagacattatctgatcaaatacaaagctaaacattcctcagaatggaaaccagagatc
agacttccatctggcagtgaccacgtcatgctcaagtccctggactggaatgcagagtat
gaggtttatgtgatagctgaaaaccagcaaggaaagtccaaaccagctcactatgctttc
cgaacttctgctcagcctactgtcatcccagccagcactagccctacatcaggccttggg
actgctgccatcgtaggcattctcattgttatctttgtgctgctcctggtggctgtggat
gtcacctgctacttcctgaacaagtgtggcctgctgatgtgcattgctgtcaacttatgc
ggcaaatccggcccaggagccaagggcaaagacatggaggagggtaaagccgccttctcg
aaagatgagtccaaggagcctattgtggaggtgcggactgaagaggagcggacccccaat
cacgatgggggaaaacacacagagcccaatgagaccaccccgctgacggagccagagcac
cctgccgataccgcagctactgttgaggacatgctgccttctgtaactacaggcaccact
aactctgacactatcactgaaacctttgccactgctcagaacagccccaccagcgagacc
actacgctgacctccagtattgccctgccagccacggccattcctgactcaaactccatg
tcgcctggccaggctactccagtcaaaggggcagccacctcagtctcttcaccaccaccc
tcctccacccccaaagtggcccctcttgttgatctcagcgataccccaagctctactcca
gctactaataatttgtcttcaagtgtcctgtccagccaaggtgcagtgctcagccccagc
gctgttgctaacgtggccgagatctccaaagtggcaggtggtaacaagccagctgcccca
agccctgcaaacctcactagccctccagttccatcagagcccaagcaggaggtctcaagc
acaaagagccctgaaaaggaagctgtgcagcccagtacagtgaagagcccaacagagaca
accaagaacccaagcaatctgaagagcgaggctgcttcaggcagcaccacaaacccctca
cagaatgaggactttaaaatggacgaagggaccttcaagacaccagacattgatcttgca
aaggatgtttttgcagctcttggcactactactcctgccagcgtgactagcgggcaagct
cgtgagcttgctgcttctactgcagacagctctgtacctgctgcacctgcaaagaccgag
aaaatcccagtagaagacaaatctgaagtgcaagcaacggaaactaagacacctccagca
gaagtcaagacggtccccaatgaagccacacaaacaaatgaaaatgagagcaaagcatga
DBGET
integrated database retrieval system
