Calonectris borealis (Cory's shearwater): 142092670
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Entry
142092670 CDS
T11211
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04270
Vascular smooth muscle contraction
cbor04625
C-type lectin receptor signaling pathway
cbor04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
142092670 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
142092670 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
142092670 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbor04131
]
142092670 (ARHGEF12)
Membrane trafficking [BR:
cbor04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
142092670 (ARHGEF12)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
SOS1_NGEF_PH
Ribonuc_2-5A
Motif
Other DBs
NCBI-GeneID:
142092670
NCBI-ProteinID:
XP_075029049
LinkDB
All DBs
Position
24:3499332..3579985
Genome browser
AA seq
1440 aa
AA seq
DB search
MRAGVQTGDRIIKVNGTLVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSEVDL
AAFGHMSPIMTSPHSPGTSGNAERITSPVLVGEENNIVHNQKVEILKKMLQKEQERLQSL
QEEYSRSPTTRLLKEIQETKKHIPQLQEQLSKATGCTQDGVLSSRSVMESLQISEVEAES
GDCVSKLDYSGDSPSRPNSDIADSPRSGLKERIYLDESPEKTEVQDTDSQSSVGSPLSRG
GPQIIGAEDDDFDTEQEQINGQCSCFQNIELLKSRPAHLAVLLHHVVSQFDPAALLCYLY
TDLYKQTNSKETRRVFLEFYQFFLDRAANLKVPVPDEISLELDRRRPELLPEELHRQFIQ
TMQDKVCPEVQRNLEDFRQKRSMGLTLAEGELTKLDAERVRDRNAVEKERACAEQIIAKI
EEVLMTSQPLEEEKSSTMQYVILTYMKHLGVKVKEPRNLEQKRGRIGFLPKIKQSIKKEK
EGEEKGKRRGFPNILGPPRRPSRHDSSAIGRAMEMQKPRHPKHLPAASSVSPEPPDSSKM
RQSGSSSDGTDAPYPPANPMSPLAMGPFSSPEGSKDSETGLKQTGEAPPANDCIDGTPRT
PNNTFEFPSPLENLQEEEGESERMVDMGTPKPFRKMDSVGFADVQSEDELYDFDMDMDPP
NWQQLVSREVLMGLKPYEIKRQEVINELFYTERAHVRTLKVLHNVFYQRVTREGILNSSD
KRKIFSNLEDILGLHVALNDQMKAVRKRNETSVIGQIGEDLLSWFSGPAEEKLKHATATF
CSNQPFALEVIKSRQKKDSRFQTFVQDAESNPLCRRLQLKDIIPTEMQRLTKYPLLLDNI
AKYTELPEEKEKVKKAADHCRQILNHVNQAVKESENKQHLEDYQRRLDLSYLKQSEDPMM
DEFRNLDLTKRKMLHEGPLIWKVNRDKTIDLYTLLLEDILVLLQKQDDKLVLKCHSKILA
STADSKHTFSPIIKLNTVLVRQVATDNKAFFVISMSENGAHIYELVAQTVSEKNVWQDLI
AQMAGTVKMGSTRRVIPLPQSGPGEEEREEEEQQKLKEQHDIPASSLQSPDKDLGLESPL
ILNAQSSSPIMSEKSKVESLLVSERQFDKVQQADLTLKDSSACYEHTTTSLPSVSEGQWA
LDALRNLGLLKQLLVQQLGFSEKGTLEDRQRFPRFRTVSQEAQTESRSEPGLQHSDNNKF
HQPGTDRMLPRTGTNESTASYGLRTSAESPASGDAMQLIVRDPRSSSNLAIDRMSMNLEI
STTDLEGVGADESGEHFFDAREAHSDENPSESELMERKEEEDVQIRISGNYLILDGYGTV
QESSTDEEVSSLVLQCTAGGRTSLDSAQQQPLSPRDTQSDGGSSPFAEEMMASRWGGVEE
SCSFVASPHFSIESRVQVMQYIQKIEDDLEKLKEVEEDYTVLRRQGLAGSASTGEHSDKS
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atgcgggctggagtgcaaacaggcgatagaattatcaaggtgaatggcactcttgtaaca
cactcaaaccatttggaggtggtaaagctgatcaagtcgggttcctatgtagctctcact
gttcaggggcgcccaccggggtcgccccagattccattagctgattctgaagtggatctg
gcagcatttgggcatatgtctcccatcatgacatctccccattcacctggcacatcagga
aatgcagaaaggattactagcccagtgcttgtgggggaggagaataatattgtccacaac
cagaaggtagagattctgaaaaagatgctacagaaagagcaggaacggctgcagtccctg
caagaagagtatagccgatcacccaccacacgactgctcaaagagatacaggaaacgaag
aagcacattcctcagctgcaagagcagttgtccaaagccacgggctgtactcaggatgga
gtcttgtcctccaggtctgtgatggaatcactgcagatcagtgaagtggaggcagagagc
ggggattgtgtaagcaaactggattacagtggtgacagcccatcccgaccaaacagtgac
attgctgatagtcctcgcagtggcttgaaggagcggatttatctggatgagagcccagaa
aagactgaggttcaagatactgattcccagtccagtgttggaagtccgttatcccgaggg
ggtcctcagatcattggagcagaggatgacgactttgacactgaacaggagcagattaat
ggacaatgcagctgtttccaaaacattgagctcctgaaatctcgcccagctcacctggct
gttcttctgcatcatgtggtgtctcagtttgacccagcagcattgttgtgctacctttac
acagacttgtacaagcagaccaactccaaagagactcggcgtgtcttccttgagttttac
cagttcttcttggaccgagctgcaaatctaaaagttcctgttccagatgaaatctcctta
gaactagacagaagaaggccagaactccttcctgaagagcttcatcgccagtttatacaa
actatgcaagataaagtctgtccagaagttcaaagaaatctggaagatttcaggcagaaa
cgtagtatgggattgaccctggcagaaggagagctaaccaagctggatgcagaaagagtt
cgtgaccggaatgcagtggagaaggaaagagcatgtgcagaacagattattgctaaaatt
gaggaagtgttgatgacatctcagcctttggaagaagagaagagttccacaatgcagtat
gtgattcttacttacatgaaacacctgggagtcaaagttaaagaacctcggaacctggag
cagaagcgtggccgtattggtttcttgccaaagataaagcaaagtatcaagaaagagaaa
gaaggagaggaaaaaggaaagagaagaggctttcctaatattctgggcccaccaaggaga
ccaagtcgacatgatagcagtgcaattggcagagccatggaaatgcagaagccccgccat
ccgaagcacttacctgcagcgtcttctgttagcccagagccaccagattctagcaagatg
cgccagagtgggtcctccagtgatggaacagatgcgccatacccacctgccaacccaatg
tctcctttggcaatgggtcccttttcctctccagagggaagcaaggacagcgaaacaggt
ttgaagcagactggagaagctccacctgctaatgactgtatagatggcacaccccgcaca
cctaataatacctttgaattcccatctcctttggaaaatttgcaggaggaggagggagaa
tcagagagaatggttgacatgggaacaccaaagccttttcgcaagatggacagtgttggt
ttcgcagatgtacaaagtgaagatgagctatatgattttgacatggacatggaccctccc
aactggcagcaacttgtgagccgagaagtgttgatggggctgaaaccgtatgaaatcaag
cgccaagaagtgattaatgaattgttttacactgagagagctcatgtccgcacgctgaag
gttctgcataacgtcttctaccagcgtgtcacccgggaagggatcctgaactccagtgac
aaacggaaaatcttttcaaatctggaggatatccttgggcttcatgttgctttgaacgac
cagatgaaagctgtccgaaaaaggaacgagacttctgttattggccaaattggggaagac
ttgctttcctggtttagtggaccagcagaggagaagctgaaacatgcaactgctactttc
tgcagtaaccagccctttgctctagaggtcatcaagtcacgccagaagaaggactctcgc
ttccagacttttgtgcaggatgctgagagtaatccactgtgtcgccggttgcagctgaag
gatatcattcccacagagatgcagaggttgactaagtacccccttctgctggataacatt
gctaagtacacagaactgcctgaagagaaagagaaagtgaagaaagcagcagatcattgt
cgtcagatcctaaaccatgtgaaccaggctgtcaaagagtctgagaacaagcagcatttg
gaagattatcagcgtcgtcttgacctgtcctacttgaagcagtctgaggatcccatgatg
gatgagttcaggaacttggatctaacgaagaggaaaatgcttcatgaaggacctctaatt
tggaaggttaatcgtgacaaaactatcgatctctatactctgcttctggaggacattctg
gtgctgttgcagaaacaagatgataaactggtactgaagtgtcacagtaaaatcttggca
tcgacagctgatagtaaacacaccttcagtcctatcatcaaattgaacaccgttctggtt
cgtcaggtggcaacagataacaaagctttcttcgtcatctccatgtcagaaaatggcgct
catatttatgaactggtggcacagactgtttcagaaaagaatgtatggcaggatcttatc
gctcagatggcagggaccgtgaaaatggggagtaccagaagagtgattccattaccacag
tcaggacctggcgaagaagagcgtgaagaagaggagcagcagaagctcaaagagcagcat
gacattcctgccagtagtctacaaagtccagataaagatttgggcctcgaatctccctta
atactgaatgctcagtcttcttcgccgatcatgtctgaaaagtccaaggtagaaagtctt
cttgtgtcagaaagacagtttgataaagtgcagcaggcagacctgacacttaaagattcc
tctgcatgctatgaacacacaaccaccagtttaccttccgtatcagaagggcagtgggca
ttggatgcattaaggaacttgggcttgctgaaacaattgttggtacagcagcttggcttt
tctgagaaggggactcttgaagaccgacagcgctttcccaggtttaggaccgtttctcaa
gaagcccaaacggagagtcgaagtgagcctggactacagcactctgacaataacaaattt
caccagcctggaacagacagaatgcttccgagaaccggaactaatgagtctacagctagt
tatggcctccggacttcagctgaatcaccagcttcaggggatgccatgcagctgatagtg
agagaccccagatcaagtagtaacttagcaatagaccgcatgagtatgaatctggagatc
tcaaccacagatctggaaggggtgggtgctgatgaaagtggggagcatttttttgatgct
cgagaagctcacagtgatgaaaatccatctgaaagtgaactaatggaaaggaaggaggaa
gaggatgtgcaaatacggatctcaggaaattatttgatccttgatggatatggaacagtg
caagagagctccacagatgaggaggtatcatctctagttctccagtgcactgcaggtggc
cgcacctctttggactctgcacagcagcagccactttccccacgggacacccagtcggat
ggaggaagctccccgtttgctgaggagatgatggcctcacgctgggggggagtggaagag
tcctgctcatttgtagcaagccctcacttctctatagagtcgcgtgtgcaggtgatgcag
tatattcagaagatagaggatgaccttgaaaagttaaaggaggttgaggaagactacacc
gttctccgacgccaggggctggctggatcagcctccacgggagagcactcagacaaaagc
tag
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integrated database retrieval system
