Calonectris borealis (Cory's shearwater): 142092828
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Entry
142092828 CDS
T11211
Symbol
TRIT1
Name
(RefSeq) tRNA dimethylallyltransferase isoform X1
KO
K00791
tRNA dimethylallyltransferase [EC:
2.5.1.75
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cbor01006
]
142092828 (TRIT1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbor03016
]
142092828 (TRIT1)
Enzymes [BR:
cbor01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.75 tRNA dimethylallyltransferase
142092828 (TRIT1)
Prenyltransferases [BR:
cbor01006
]
Compound prenylation
tRNA dimethylallyltransferase
142092828 (TRIT1)
Transfer RNA biogenesis [BR:
cbor03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
142092828 (TRIT1)
Prokaryotic type
142092828 (TRIT1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
IPPT
zf-C2H2_jaz
zf-met
PDH_C
Motif
Other DBs
NCBI-GeneID:
142092828
NCBI-ProteinID:
XP_075029447
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Position
25:complement(3406973..3423151)
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AA seq
472 aa
AA seq
DB search
MSPPVTRGARRGLQHWQATGSPLTRRETRTPPPSPGPAGSLHRASRPGWEAWRGSSAGWC
RLCSRRLCYGRSVYKGLDIITNKVSPQEQRLCRHHMISFVDPLVSNYTVVDFRDKAVALI
EDIFARDKIPIVVGGTNYYIESLLWKVLINTKEKASAAPGLVTDRKVELEQLDGVELYRR
LSQVDPEMAAKLHPHDKRKVARSLQVFEETGIPHSEILHQQQEEEGGGPLGGPLKYPHSC
ILWLHADQAALDQRLEKRVDDMLAAGLLEELRDFHRRYNQEKVAENRQDYQHGIFQSIGF
KEFHEYLVSEGNCSPETSALLLQKGIQALKQVTKRYARRQNKWVRNRFLRRPGPNVPPVY
GLEVSDLLRWEEDVLKPALEIVESFIQGREPPAEPVKMEYDINENKRSHRLCELCDRVII
GDREWAAHTRSKSHLHHLKKRRKLEAASRAAETEGDSGRAETSGEDSSLPLP
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtcccctcctgtaacccgcggggcacggcgcggtctgcagcactggcaagccacgggc
tctccgctcacccgcagggagacgcgcacccctccgccatcaccgggacccgctgggtcc
ctgcaccgtgcctcgcgccccggctgggaggcctggcgaggcagcagcgctggctggtgc
cgtctgtgctcccggaggctgtgttatggacgtagcgtgtacaagggcttggacatcatc
acgaacaaggtttctccccaggagcagcgtctgtgcagacaccacatgatcagcttcgtg
gatcctcttgtctctaactacacggtggtggatttcagagacaaagccgtggctctgatt
gaagatatttttgcccgagacaaaatcccgattgttgtgggaggaaccaactactacatc
gagtccctgctctggaaggtccttatcaacaccaaggagaaggccagcgcggcccccggg
ctggtcactgacaggaaagtggagctggagcagctggacggcgttgagctctatcgccgc
ctgagccaagtggacccagagatggcggccaagctgcacccccacgacaagcgcaaagtg
gccaggagcctccaagtgtttgaagagacagggatcccccatagtgaaatcttgcaccag
cagcaggaggaggaaggtgggggacccttaggggggcccctgaaatacccacattcctgc
atcttgtggctccatgcagaccaggcagctctggaccagcggctggagaagcgggtggat
gacatgctggctgcgggactgctggaggagctgcgggacttccaccgacgctacaaccaa
gagaaggtggctgagaaccggcaggattaccagcacggcatcttccagtccatcggcttc
aaggagttccacgagtaccttgtcagtgaggggaattgctcacccgagaccagtgctctg
ctgctgcaaaaagggatccaggccctgaaacaggtgaccaagaggtacgcccggaggcag
aacaagtgggtccgaaaccgcttcctgagacgtcccgggcccaacgtgcccccggtgtat
ggcttggaggtgtctgatctcctgcggtgggaggaggatgtgctgaaacctgctctggag
attgtggagagcttcatccagggacgtgagcccccagcagagcctgtgaagatggagtac
gatataaatgagaacaaacgcagtcatcgcctgtgtgagctgtgcgacagagtcatcatc
ggggacagggagtgggcagctcacacacgatccaaatcccacctgcaccatctgaagaag
aggaggaagctggaggccgccagccgtgctgcagagactgagggggacagtgggagggca
gagacctcgggggaggacagcagcttgcctttgccgtag
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