Calonectris borealis (Cory's shearwater): 142093554
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Entry
142093554 CDS
T11211
Symbol
RAB11FIP1
Name
(RefSeq) rab11 family-interacting protein 1 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
142093554 (RAB11FIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbor04131
]
142093554 (RAB11FIP1)
Membrane trafficking [BR:
cbor04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
142093554 (RAB11FIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
142093554
NCBI-ProteinID:
XP_075030914
LinkDB
All DBs
Position
27:complement(4245536..4260833)
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AA seq
1410 aa
AA seq
DB search
MSGPGPAPAWAPTHVQVTVLRARGLRAKAAAGGGGSDAYTVMALGREKFSTSVAERCQGQ
PLWREEATFELPPPPRPAALRLTVLHRALVGLDKFLGRAEVDLAALRADGGRRHSRWYKL
RSKPGKKEKERGEIEVDIQFMRSNLTASMFDLSVKDKSRSPFGKLKDKLKGKRSSGLSDT
ASAIIPSTTHSPADSEDESVEKEKKKSKFKTLFSKPGLQKTSLSQSMSVLPTQQPVTEKV
RLRPSDFQSQWDDEESETSPTSEKAFGNALEEKSSPSPVFKSRKTATLDSRQLNQVTTSH
TKKEGLSLFSGLKSKSDPVSKSSLCINGSHVYMEESMMRDNTPASSPSPLNFRRKQLFAS
EENLSSRSTKGPEETGRTSPSHAFSGSASLETFKSMTLPSYKLLSSEEYPETSIAPTVEV
IKETKKTDHKKSALLSLVTGKKETVKTIDAENIPDRTLQDEENKEPEEKSEQEAKRLELP
ADLSRGNPSEDSHRAEDVFANKQPLNPFEEERKPEKAAVPAKTKAVKPRLGVSSEEETKA
TLPTLAPDSLPAFLSVHRISSDNNPFTSKTGQKVKVPDSENITSSPASITSPPPFAAELL
NGKNPFTPEWGRASAALDPEGIARFPSSHYLAASVPKTPLPVQVSGSGNNPFASEWGQSS
RGHGPESSDTRASRGLSRPPAPSLPSDCHFNDNNPFVSKLGWEPDAPGFKAVASSSPSCL
PCDEDCSSAEHPAELKRSGRDALGSSSDVALTSNVKAVSNPLGTLCASPGLAPKKQCDSP
QLQVETSLKRTKRGNPKSVSFLLDGLQGVTSGDEDLGGQGCEKSDFSEMLLTGSDATGER
AGFAGELEAGCNPTSELSSDSIGPIRNSEAAVRGGVEVGGVNTEPCTKDGKHFASLSKCS
NSLLPEIGAEQPPSRESELNEIFGEKRREKCAPTLEAQATPLDKNDSFSQVGSARPTLGA
CTLSSWEANVGRAGSEVLVTPKPAPRLSLTLKKCPPVSQADELSGDVPSSGDGVKSAPGL
ALPNEKTSDAHGCLPQSGSLETITPPVTLRDDGSNRHLKNEGDNDLFDCLTNFKSAIPIT
GDRGSKLASLPVIPEGGSDDELLGDCQENRGVTAGDKNISETGKQSLDLMPLREELEEHS
DSSAAAQVTPAAPGGGGSAPGACKPSKPPVLPAGVDVHSVDNQVADSGLGMTSHSREHNS
HFEKQELKISAGVEERAECDFFEPSVSSSSLSSPSQPYSSSHSLSSVTPSRRAESPKKPT
AEGFADKAGNSGKKKLLQAWVSPSETYPNQTQQSGETVSPKHRLHPVKPMNATANKSQSK
NLNVISTMNEKLLEMNVKKYDPSDPAYAYAQLTHDELIQLVLKQKDTITRKDLQVRELED
YIDNLLVRVMEETPNILRVSTSGNKKAGKM
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcccgggcccggccccggcctgggcgcccacccacgtacaggtgacggtgctg
cgggcgcgggggctgcgggccaaggcggcggcgggcggcggcggcagcgacgcctacacc
gtgatggcgctgggtcgcgagaagttctccacctcggtggcggagcggtgccaggggcag
ccgctctggcgggaggaggccaccttcgagctgccgccgccgccgcggcccgccgccctc
cgcctcaccgtgctgcaccgcgccctcgtcggcctcgacaagttcctgggacgcgccgaa
gtcgacctggcggcgctgcgggccgacggcggccggcggcacagcaggtggtacaagctt
cgctccaaacctgggaagaaggaaaaggagagaggggagattgaagtggatatccagttt
atgaggagcaacctgacagccagtatgtttgatctgtccgtgaaagacaagtctcgctct
ccctttggcaagctcaaagacaagctcaaggggaagaggagcagtggcctttccgacacg
gcgtcggcgatcattcccagcacgactcactcccctgctgacagcgaagacgagtcggtc
gagaaggaaaagaagaaatcaaagttcaaaaccctgttttccaaacctggcctgcagaag
acttccctctcccagtccatgtcagtcctaccgacgcaacagcccgtcaccgagaaggtt
cggcttcggcccagcgacttccagtcgcaatgggacgacgaggagtcggagacctctcca
acctcagaaaaagcctttggaaatgccctggaagagaagtcctctccttctcccgtattt
aaatctcgtaaaacagcaactttggacagcaggcaactaaaccaagtaaccactagccac
accaagaaagaagggctctctttattcagtggccttaaatccaaaagcgatcctgtttcc
aagtctagcctgtgtatcaatggcagtcatgtttatatggaagagagcatgatgagggac
aacactccagcctcttccccctctcctctcaacttcaggaggaagcagctctttgcttca
gaagagaacctgtcttccagatctactaaaggacctgaagagacgggaagaacatctcct
agtcatgctttctctgggtctgcatccttggagacctttaaatctatgactttgccgtca
tacaaattgcttagcagtgaagaatacccggaaaccagcattgctccaactgtcgaggtt
attaaagagaccaaaaaaacggaccacaaaaagtctgccttgctctctctggtcacaggg
aagaaggaaacagtgaagaccattgatgctgagaatattcccgacaggaccctgcaggat
gaggaaaacaaagagccagaagagaagagcgaacaagaggccaaacgtcttgaacttcca
gcagatttaagcagagggaatccttcagaagacagtcaccgcgcagaagacgtctttgca
aataagcagccgctgaaccctttcgaggaagaaaggaaacctgaaaaagctgctgtgccg
gcgaagaccaaagctgtcaagcccagactgggcgtgtcttcagaggaggaaaccaaagcc
acacttcctactcttgcacctgattcccttcctgcttttctttctgtacaccgtatcagt
agtgacaataatccttttacttctaaaacaggacaaaaagtcaaagtgccagactctgaa
aacattactagttctcctgcatctattacttctcctcctccttttgctgcagagcttttg
aatggcaagaacccctttactcccgagtggggcagggcatccgcagccctggatcctgaa
ggcattgcccgtttcccttcgtcccattatcttgcagcctctgttcccaaaacgcctctt
cctgtgcaggtctctggtagtggtaataatccttttgcttctgaatgggggcagagctca
cggggccacggtcctgaaagctctgatactcgggcctcccggggtctctctcgcccaccc
gcaccttctctcccctcggattgtcattttaatgacaataatccctttgtatccaagctt
gggtgggaaccagatgcgccaggtttcaaagctgttgctagttcttccccttcctgcctt
ccttgtgatgaagactgttcctcagcagaacaccctgctgagctgaaacgctctggtcgc
gatgctttagggagctcttcggatgtggctttaactagtaatgtcaaagctgtgtcaaac
cctctcggcaccctttgtgccagccctggcctggctccaaagaagcagtgcgattctccc
cagcttcaggttgagacttctttgaaaagaactaagcgaggcaacccgaaatctgtgtcc
tttctccttgatggattgcagggtgttacatcaggtgatgaggatttgggtgggcaggga
tgtgaaaagtctgatttcagtgaaatgttattgacaggttccgatgcaacaggagagcga
gcagggtttgctggcgaactggaagcagggtgcaatccaacgtcggaactctctagtgac
agcataggtcccatccgaaacagcgaggctgctgttcggggtggtgtggaagtaggtggt
gtaaatactgaaccgtgcacaaaggacggcaagcactttgcatctctctcgaagtgtagt
aatagcctcttgccagagatcggtgctgaacagccaccttcccgcgagagcgagctgaat
gagatcttcggtgaaaagagacgagaaaaatgtgcacccacgttagaggcccaagcaact
ccacttgataaaaatgactcattttctcaagtaggatctgccagaccaaccttgggagct
tgcacactgtcctcgtgggaagccaatgtagggagggctggcagtgaggtgttagtcact
ccaaagccagcacctcggctgtctttaacgctgaaaaagtgcccaccggtttctcaggct
gatgagttaagtggtgatgtgccttcttcaggcgatggtgtaaaatctgcgcctgggctc
gcattacctaatgaaaaaacctcagatgctcatggctgcctcccccaaagtggctcatta
gagactatcactccaccagtgacgctcagagatgatggcagtaataggcatttaaaaaat
gaaggtgacaacgatttatttgactgtcttacaaatttcaagtctgccattcccattact
ggagaccgtggttcgaaactggccagtcttccagttattccggagggaggctccgatgac
gagctgctgggtgactgtcaggagaaccgtggtgtcactgcaggtgataaaaacatctca
gagactggaaagcagtccttagatttaatgcctttgcgtgaagaactggaagagcactct
gatagctctgctgcagcccaagtaaccccggccgctccaggaggaggagggagtgctcct
ggtgcttgtaagccaagcaaaccacccgtgctgcctgccggagtagatgttcacagtgtc
gataaccaggtagctgactcaggcttaggtatgacgtctcattccagggagcataatagt
cattttgagaaacaagaactgaaaataagtgcaggtgttgaggagcgtgcagagtgtgac
ttctttgagccttctgtttcctcttcctccctgtcaagtccttcccagccctactcttcc
tctcattctctctcctctgttaccccaagtcgtagagcagagtctccgaaaaagccaaca
gccgagggcttcgcagataaagcaggaaattctggcaagaagaagcttcttcaggcatgg
gtttcaccctctgaaacatatcctaaccaaactcagcagagtggtgaaaccgtgtctcct
aagcacaggctccatcctgtgaagccaatgaatgccacagcaaacaagtctcaaagtaaa
aacctgaatgtcatcagcactatgaatgaaaagctgcttgagatgaacgtgaagaaatac
gatccttcagatcctgcctatgcctatgctcagcttacacacgacgagctgatccagctg
gtcttgaaacagaaggatacaattaccaggaaagatctccaggtgcgtgagcttgaagac
tacatcgataacttgcttgtcagagtcatggaagaaaccccaaacattcttcgtgtttca
acgtctggaaacaaaaaagctggcaagatgtaa
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