Calonectris borealis (Cory's shearwater): 142093653
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Entry
142093653 CDS
T11211
Symbol
USP39
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 39
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142093653 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbor03041
]
142093653 (USP39)
Spliceosome [BR:
cbor03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
142093653 (USP39)
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
142093653
NCBI-ProteinID:
XP_075031141
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Position
27:complement(6386557..6392920)
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AA seq
593 aa
AA seq
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MSSRGKREREREARAAPRGAGGGGGSSSSRGSSRSRREGEAERSRGRREAERDRGRREAA
EPGLALPLPVDPARIKREPGTGTGFWGGSGTATPTGPVRVKREREPDGDSDPEPEPTVRY
GRFDPEDQRSRHCPYLDTINKSVLDFDFEKLCSISLSHINVYACLVCGKYFQGRGLKSHA
YIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTAQQITNLDKQAKLS
RAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEENYKSIQRPPGDIMFL
LVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKNFQITKQGDGVDFLSWFLNALHS
ALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKAQLLQNTEYQEMMVESTFMYLT
LDLPTAPLYKDEKEQLIIPQVPLFSILAKFNGATEKEYKTYKENFLKRFQLTKLPPYLIF
CIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAAHANTTYDLIANIVHDGKPSEG
SYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRREEDETNQQGA
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagccgcgggaagcgggagcgggagcgggaggcccgggcggccccgcggggggcg
ggcggcggcggcggctcctcctcgtcgcggggctcgtcgcggagccgccgagagggggag
gcggagcggtcccgggggcggcgggaggcggagcgggaccgcgggcggcgggaggcggcg
gagccgggcctggccctcccgctcccggtggatcccgcccgtatcaagcgggagccgggc
accggtaccggcttctgggggggctccggcaccgccacccccaccggcccggtgcgggtc
aagcgtgagcgtgagcctgatggcgactccgatcctgagcccgagcccaccgtgcgctat
ggccgtttcgaccccgaggaccagcgcagccggcactgcccctacctggacaccatcaac
aagagcgtcctggactttgatttcgagaagctctgctccatctcgctgtcccacatcaac
gtctacgcctgcctcgtctgcgggaagtacttccagggccgcgggctgaagtctcacgcc
tacatccacagcgtccagttcagccaccacgttttcctcaacctccacaccctcaaattt
tattgcctccccgacaactacgagatcatcgactcctcgctggaggacatcacgtacgtg
ctgaagcccaccttcaccgcgcagcagatcaccaacctggacaagcaggccaagctctcc
cgtgcctacgacggcaccacgtatctacccggcatcgtggggctcaacaacatcaaagcc
aacgactacgccaacgccgtccttcaggctttatccaacgtgccgccgttgaggaattat
tttttggaagaggagaattacaagagcatccaacgcccgcccggggacatcatgttcctg
ctggtgcagcgtttcggggagctgatgaggaagttatggaacccccggaacttcaaagcg
cacgtttcgccccacgagatgttgcaggccgtggtcctctgcagcaagaagaacttccag
atcaccaagcaaggggacggggtggatttcctctcctggttcctgaacgccctgcactcg
gccctgggcggcacgaaaaagaagaagaagaccatcgtcaccgacgtcttccagggctcc
atgcgtatcttcaccaaaaaactgcctcacccggatctgccggccgaggagaaggcgcag
ctcctgcagaacaccgagtaccaggagatgatggtagaatccaccttcatgtacctgacg
ttggaccttcccaccgccccgctctacaaggacgagaaggagcagcttatcatcccccag
gtccccctcttcagcatcttggccaaattcaacggcgccaccgagaaagagtacaagacc
tacaaggagaactttctcaagcgcttccagctcactaaactgcctccctacctcatcttc
tgcatcaaacgcttcaccaagaacaacttcttcgtggagaagaatcccaccatcgtcaac
tttcccatcacgaacgtggacctgcgggagtacctgtcggaggaggtgcaagcggcgcac
gccaacaccacctacgacctcatcgccaacatcgtgcacgacgggaagccctccgagggc
tcttaccgtatccacgtgctgcaccacggcacggggaagtggtacgagctgcaggacctg
caggtgaccgacatcttgccgcagatgatcaccctctcggaggcgtacatccagatctgg
aagcggcgcgaggaggacgagacaaaccaacaaggcgcctga
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