Calonectris borealis (Cory's shearwater): 142093771
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Entry
142093771 CDS
T11211
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4 isoform X1
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03018
RNA degradation
cbor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142093771 (LSM4)
09123 Folding, sorting and degradation
03018 RNA degradation
142093771 (LSM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbor03019
]
142093771 (LSM4)
03041 Spliceosome [BR:
cbor03041
]
142093771 (LSM4)
Messenger RNA biogenesis [BR:
cbor03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
142093771 (LSM4)
mRNA degradation factors
5'-3' decay
Lsm complex
142093771 (LSM4)
Spliceosome [BR:
cbor03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
142093771 (LSM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
142093771
NCBI-ProteinID:
XP_075031348
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All DBs
Position
28:5315502..5322760
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AA seq
138 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGGMQQQKQQKGRGVGGAGRGVFGGRGRGIP
GSGRGQQEKKPGRQSAKQ
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccctgtccctgctgaagacggcgcagaaccaccccatgctggtggagctgaaa
aacggggagacgtacaacgggcacctggtgagctgcgacaactggatgaacatcaacctg
cgggaggtcatctgcacgtcccgggatggagacaagttctggagaatgccagagtgctac
attcgtggcagcacgattaaatacctgcgtatccccgatgaaataattgacatggtgaaa
gaagaggtggtgtccaagggcagaggccgtggtgggatgcaacagcagaagcaacagaag
ggccgtggtgttggaggtgctggacgaggtgtgtttggtggccgtggccgaggaatacca
ggcagtggaagaggccagcaggaaaaaaagccaggcagacaatcagcaaagcagtga
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integrated database retrieval system
