KEGG   Calonectris borealis (Cory's shearwater): 142093853
Entry
142093853         CDS       T11211                                 
Symbol
MED16
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 16 isoform X1
  KO
K15159  mediator of RNA polymerase II transcription subunit 16
Organism
cbor  Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:cbor00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cbor03021]
    142093853 (MED16)
Transcription machinery [BR:cbor03021]
 Eukaryotic type
  RNA polymerase II system
   Mediator complex
    Tail
     142093853 (MED16)
SSDB
Motif
Pfam: Med16_bridge Med16_N Med16_C WD40 Beta-prop_IFT140_1st Beta-prop_WDR3_1st ANAPC4_WD40 WD40_WDHD1_1st Beta-prop_WDR35_TULP_N Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_THOC3 DSE1_N Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_HPS5 Beta-prop_EML Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 142093853
NCBI-ProteinID: XP_075031513
LinkDB
Position
28:complement(3770822..3780970)
AA seq 830 aa
MDLAYVCEWEKKPKSNHCPSIPLVCAWSCRNLIAFTTDLKNEEEKDLTHMVHIIDTEHPW
DVYSVNSGHAEVITCLEWDQSGSRLLSADADGHIKCWSMTDHLANSWENTVGSMVEGDPV
VALSWLHNGVKLALHVEKSGASNFGEKFSRVKFSPSLTLFGGKPMEGWIAVTISGLVTVS
LLKPNGQVLTSTESLCRLRCRVALADVAFTGGGNIVVATSDGSSSSPVQFYKVCVSVVNE
KCKIDTEILPSLFMRCTTDPARKDKYPAITHLKFLARDMSEQVLLCASNQNSSIVECWSL
RKEGLPVNNIFQQISPVVGDKQPMILKWRILSATNDLDRVSAVALPKLPISLTNTDLKVA
NDTKFFPGLGLALAFHDGSVHIVHRLSLQMMAVFYGSSSQRPVDEQTIKRQRTAGPLVHF
KAMQLSWTSLALAGIDSHGKLSMLRISPSMGHVLDMNMSLRHLLFLLEYCMVTGYDWWDI
LLHVQPNMVQNLVEKLHEEYMRQNAALQQVLSTRIVAMKASLCKLSSSTIARVCDYHAKL
FLIAISCTLKSLLRPHFLNTPDKSPGDRLTEICSKITDIDIDKVMINLKTEEFVLEMTTL
QSLQQLIQWVGDFVLYLLASLPNQGSPVRPGHSFLRDGASLGMFRELMVVIRIWGLLKPS
CLPVYTATSDTQDSMSLLFRLLTKLWLCCREENHITEPDDTLIDECCLLPSQLLIPNIDW
LPINDGIISKLQNKQLVRLQFGKAPGLVGHTVSSQFDAFVRAPGQPKIDHLRRLHLGAYP
TEECKSCTRCGCVTMLKSPNKVTAVKQWEQRWIKNCLCGGLWRRMPLSYS
NT seq 2493 nt   +upstreamnt  +downstreamnt
atggacttggcgtatgtctgcgagtgggagaaaaagccgaaaagcaaccactgtccttcc
attcccttagtgtgcgcgtggtcctgccggaacctcatcgctttcaccacagacctcaaa
aatgaggaggaaaaagatctcacccacatggtccatatcatcgacactgagcatccgtgg
gacgtctattccgttaactctgggcatgctgaagtcatcacttgtttggagtgggatcag
tcgggctccaggctgctctcggcagacgcggacggccacatcaagtgctggagcatgacc
gatcacttggccaacagctgggagaacaccgtgggcagtatggtggaaggggacccggtg
gtggccctgtcctggctgcacaacggcgtgaagctggctctgcacgtggaaaagtctgga
gcatcgaactttggtgagaagttttccagggtcaagttctctccgtcgctgacgctgttt
ggtgggaagcccatggagggctggattgctgtgaccatcagtgggctggtgacggtctct
ctcctcaagcccaatgggcaagtgctgacgtccacagagagcctgtgccgcctccgctgt
cgcgttgccttggcggatgtcgccttcactggtggggggaacatcgtggtggccacatcg
gatggcagcagctcctcccctgtccagttctacaaagtctgcgtcagcgtggtgaatgag
aaatgcaaaatagacaccgaaatcctgccttccctcttcatgcgctgcaccacggaccct
gcccgcaaagacaaatacccagcaatcactcacctgaaattccttgctcgggacatgtca
gagcaggtgttgctttgtgcttccaaccaaaacagcagcatcgtggagtgctggtctctg
cggaaagagggcttgccggtcaataatatctttcagcaaatctcccctgtggttggagac
aagcaacccatgatactgaaatggcggattctttctgccaccaatgacttggatcgggtt
tcagctgtggctctgccgaagctgccaatctccctgaccaatactgatctgaaggtggcg
aatgacaccaaattcttccctggattgggtctggctttggcttttcacgatggcagcgtc
cacattgttcatcgcctgtccttgcaaatgatggctgtcttctatggctcttcctcccag
cgcccggtggacgagcagactatcaaaagacagcgaaccgctggtcccctggttcacttc
aaagccatgcagctctcctggacatctctggccttggctggcattgatagtcatgggaag
ctgagcatgcttcgtatctccccctccatgggccatgtgctggacatgaacatgtccctc
cgtcacttgctgttcctgttagagtattgcatggtgactggctacgactggtgggacatc
ctgctccacgtccaacccaacatggtccagaacctggtggagaagctgcatgaagagtac
atgcgccagaatgcggccctgcagcaggtcctctccacgcgcattgttgccatgaaggca
tctctctgcaagctctcctccagcacgatagcccgcgtgtgtgactaccacgcgaagctg
ttcctgatcgccattagctgcaccttgaaatctctgctacgcccacacttcctgaacacc
ccggacaagagtcccggggaccgactcaccgagatctgctccaagatcacagatatagac
attgacaaggtgatgattaacttgaagacggaagagtttgtcctggagatgaccacgctg
cagtccctgcagcagctcatccagtgggtgggagattttgtgctctatctgctggccagc
cttcctaaccagggctcccctgtgcggcccggacacagctttctgcgagacggagcgtcc
ctgggcatgttcagggagctgatggtggtgatccgtatttggggactgttgaagccaagc
tgcctccccgtctacacagcgacctccgacacccaggacagcatgtccctcctcttcagg
ctcctgactaaactctggctgtgctgtcgtgaggaaaaccacataacggagccagatgat
accctgatagacgaatgttgcctcctgcccagccagttgctcattcccaatattgattgg
ttgcccatcaacgatggcattatcagcaagctgcagaacaaacagcttgtccggctgcag
tttgggaaagctcctgggctcgttggtcacactgtctcttcccagtttgatgcctttgtc
agggcgcctggacagcccaaaattgatcatctgaggcggcttcacttaggagcataccca
acagaggaatgcaagtcgtgtaccaggtgtggctgcgttacgatgctgaaatcgccaaac
aaagtcactgcggtgaaacagtgggagcagcgctggatcaaaaactgtttgtgtgggggg
ctgtggaggaggatgcccctcagctattcctga

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