Calonectris borealis (Cory's shearwater): 142094120
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Entry
142094120 CDS
T11211
Symbol
VPS45
Name
(RefSeq) vacuolar protein sorting-associated protein 45 isoform X1
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
142094120 (VPS45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbor04131
]
142094120 (VPS45)
Membrane trafficking [BR:
cbor04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
142094120 (VPS45)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Ig_NOMO
Motif
Other DBs
NCBI-GeneID:
142094120
NCBI-ProteinID:
XP_075032069
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Position
29:complement(3671479..3700544)
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AA seq
611 aa
AA seq
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MNAVLAVKQYVSKMIEDSGPGMKVLLMDRETTGIVSMVYTQSEILQKEVYLFERLDSANR
EAMKHLKAICFLRPTKENVELLIQELRRPKYSIYFIYFSNVISKSDVKSLAEADEQEVVA
EVQEFYGDYIAVNPHVFSLNLLGCCQGRSWDPAQLSRTTQGLTALLLSLKKCPMIRYQLS
SESAKRLAECVKQVITKEYELFDFRRTEVPPLLLILDRSDDAITPLLNQWTYQAMVHELL
GINNNRIDLSRVPGISKDLREVVLSAENDEFYANNMYLNFAEIGSNIKNLMEDFQRRKPK
EQQKLESIADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVGERNLLEVSEVEQELACQ
NDHSSALQNVRRLLQNPKVTELDAARLVMLYALHYERHSSNSLPGLMTELKNRGVSEKYR
KLVSAVVEYGGKRVRGSDLFSPKDAVAITKQFLKGLKGVENVYTQHQPLLQETLDQLIKG
KLKDSQYPYLGPNTLRDRAFVPTRPTGPDGAYLRRLESTSYKIKFVIGPQDSSVTATLLK
TKHGSSTFCMNQATTYEIAAGEGMLLPGDPDGTRLIPCLSQMTTITYLPIQKSCKVTLSE
SPSRFRLKRGT
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcggtgctggccgtcaagcagtacgtgtccaagatgatcgaggacagcgggccg
ggcatgaaggtcctcctcatggaccgggagacgaccggcatcgtcagcatggtgtacacg
cagtccgagatcctgcagaaggaggtgtacctcttcgagcgcctcgactccgccaacagg
gaggccatgaagcacctgaaggccatctgcttcctgcggcccaccaaggagaacgtggag
ttgctcattcaggagctgcggaggccaaagtacagcatctattttatttatttcagtaac
gtgatcagtaagagtgatgtcaagtcgttggctgaggctgatgaacaggaagttgtggct
gaagttcaggagttctatggcgattacattgcagtgaatccacacgttttttctctcaac
ctcttgggctgctgccagggtcgcagctgggatccggctcagctgtccaggacaactcaa
gggctgactgcgctgcttttgtctctgaagaaatgccccatgattcggtaccagctctct
tctgagtcggcaaagaggcttgctgaatgcgtgaagcaagtaatcactaaagagtacgag
ctgtttgactttcggcgcactgaggttcctcctttacttctcattctggaccggtctgac
gatgccatcaccccacttctgaaccagtggacgtaccaggctatggttcacgaattgctg
gggattaacaacaaccgcatcgacctctctcgggtaccggggataagcaaggatctccga
gaggtggtcctgtctgccgagaacgacgagttctacgccaacaacatgtacctgaacttt
gcagagattggcagtaacatcaagaatcttatggaggatttccagaggaggaaacctaag
gagcagcagaagctggaatccatagcagatatgaaggcgtttgtggagaattacccgcag
ttcaagaagatgtcaggcacggtatcgaagcacgtgacggtggtgggagagctctctcgc
ctggttggtgagcggaacctgctggaggtgtctgaagtggagcaggaactggcctgccag
aatgaccattccagcgctctccagaacgtgcgtcgcctcctgcagaaccccaaggtgaca
gagcttgacgctgcccggctggtgatgctttatgccctgcactacgagcggcacagcagc
aatagcctgccagggctgatgacagagctgaagaacaggggggtgtcagagaaataccgg
aagctagtgtctgctgttgtggagtatggagggaaacgggtccggggcagcgacctgttc
agtcccaaggatgctgtagccatcaccaaacagttcctcaaaggactgaagggtgttgag
aatgtgtatacgcaacaccagcctctccttcaagaaacactagatcagctcatcaaagga
aaactcaaggacagccagtacccctacctgggtcccaacactctccgtgacagggcattt
gtccccacccgaccaactgggcctgacggtgcttacctaagacggctggagtccacctct
tacaaaatcaagtttgtaatcggaccacaggacagctccgtcactgctacgcttcttaaa
accaaacacgggtcctcaacgttttgcatgaaccaggcaacgacctatgaaatagcagca
ggagaaggcatgctgctccctggggatccagatgggactcggctcattccgtgtctctct
caaatgaccacaattacttatctgcctattcaaaaatcttgcaaagttaccttgtctgaa
agcccatcaaggttcagacttaaacgtggaacgtga
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