Calonectris borealis (Cory's shearwater): 142094180
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Entry
142094180 CDS
T11211
Symbol
ITGA10
Name
(RefSeq) integrin alpha-10
KO
K06586
integrin alpha 10
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04510
Focal adhesion
cbor04512
ECM-receptor interaction
cbor04810
Regulation of actin cytoskeleton
cbor04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
142094180 (ITGA10)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
142094180 (ITGA10)
09142 Cell motility
04820 Cytoskeleton in muscle cells
142094180 (ITGA10)
04810 Regulation of actin cytoskeleton
142094180 (ITGA10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cbor04515
]
142094180 (ITGA10)
Cell adhesion molecules [BR:
cbor04515
]
Integrins
Integrin alpha subunits
142094180 (ITGA10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
VWA_2
Integrin_A_Ig_3
FG-GAP_3
GAE_BBS1
Motif
Other DBs
NCBI-GeneID:
142094180
NCBI-ProteinID:
XP_075032190
LinkDB
All DBs
Position
29:3895467..3908225
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AA seq
1160 aa
AA seq
DB search
MEGAGCRRLLPTLLLLPGLCLGFNVDVRRPRLFHGPAEAQFGYKVLQRVGDGEKWLLVGA
PWDGDRQGDVYKCRVGPPNATCAKANLAPWLAPAPGRTEHFGMTLLGSKDGGFVACAPLW
SQECGTSVFSTGICARLDGDLRPVGTIAPTAQRCSTYMDIVIVLDGSNSIYPWYEVQNFL
SSVLGKFFIGPGQIQVGVLQYGEQVVHEWALGRYRTAEEVVEAAKNISRQEGRETRTAFA
IRRACTEAFSPERGGRADATRLMIVVTDGESHDGEELPEALAECEKRNVTRYAIAVLGHY
LRRQQDPEDFIREIKYIASDPDEKYFFNVTDEAALNDIVDALGDRIFSLEGTHGYNESSF
ELEMSQIGFSVHLLEDGILFGTVGAYDWDGAVLEESRRGRVVPPREAFREEFPLELKNHA
AYLGYAVSSLRLPGGQRLYVAGAPRFQHKGKVLLFEMDALGAVAVAQALTGEQIGSYFGS
EVCALDVDGDGVTDVLLVAAPMYLGAQSRETGRVYLYSVGQRLLAPAGTLHADKKPQDSR
FGYALAAVPDLNHDGFNDAVVGAPLEDGHRGAIYVYHGAPGTLLPHYKQRIEAAALGATL
SYFGRSVDGQLDPDGDGLVDLAVGAQGAAVLLRSRQIVQVNTSLTVEPSSINVIQKNCQR
GGTGAVCLRARVCFRARTRARGRRDREVELRYNVSLEERTAGARAAFDSGARRLLQRRLE
LSLGRQSCLRFPFHVLDTTDYLRPLSFTVRLAMAESTGPVLDETSPTTIRKLIPFFKDCG
EDNECVTDLVLRATMDIVGSRQSPHVLRKGRRKVVVDVGLENKKENAYNASLLLRFSSNL
HFSSLALQDTSPVKLECTALAGHRRLCSVGYPVFRSLAKVSFTLELEFSCSVLLDRAEVA
LEASSDSTEATVEDNAVRLSTPIRYEPDLFLSSDANLHRYEVHPLGTFPHGPGPEFKTTV
KVQNFGCYPVRNVTLRMALPALGYRRATFLSVTGVLADNATCVLQTPPEEPRQRGTATVV
PVHPEDLLHVDRLDCGNAWCQELSCRLGRLDRGGEVSIHVLRAVHNDFFRGAKFRSVKVV
STVWLGVPGSSVLVLEEGAHRRETVLEIIQAKRVPISLWILVGSILGGLLLLALIIFCLW
KLGFFTRKKLPEEEEEKEEQ
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgctgggtgccggcgcctgctcccgaccctgctcctgctcccagggctgtgc
ctggggttcaatgtcgacgtgaggcggccgcggctcttccacggcccggccgaggcccag
ttcggctacaaggtgctgcagcgggtgggcgacggggagaagtggctgctggtgggggcc
ccttgggacggcgaccgccaaggtgacgtctacaagtgtcgcgtgggaccccccaacgcc
acgtgtgccaaagccaacctcgccccgtggctggccccggcccccggccgcaccgagcac
ttcgggatgaccctgctgggctccaaggacggcggcttcgtggcctgcgccccgctttgg
tcccaggagtgcggcacctccgtcttcagcaccggcatctgcgcccggctggacggggac
ctccggccggtggggaccatcgcgcccacggcacagcgctgctccacctacatggacatc
gtcatcgtcctggacggctccaacagcatctacccctggtacgaggtgcagaacttcctc
agcagcgtcctcggcaagttcttcatcgggcccggacagatccaggtgggggtgctgcag
tacggggagcaggtggtgcacgagtgggcgctggggcggtaccggacggcggaggaggtg
gtggaggcggccaagaacatcagccggcaggaggggcgggagacgcgcacggccttcgcc
atccggcgggcctgcaccgaagccttcagccccgagcggggcgggcgggcggatgccacc
cggctgatgattgtggtgacggacggggagtcccacgacggcgaggagctgcccgaggcg
ctggcggagtgcgagaagcgcaacgtcacccgctacgccatcgcggtgctggggcactac
ctccggcggcagcaggaccccgaggacttcatccgcgagatcaagtacatcgccagcgac
ccggatgagaaatacttcttcaacgtcaccgacgaggccgccctcaatgacatcgtggac
gccttgggtgaccgcatcttcagcctggaaggcacccacgggtacaacgagagctccttc
gagctggagatgtcccagatcggcttctccgtccacctcctggaggacgggatcctcttc
ggcacggtgggagcctacgactgggacggggccgtgctggaggagagccggcggggccgc
gtcgtccccccccgggaagccttccgggaggaattcccgctggagctgaagaatcacgcg
gcttatttgggttacgccgtctcctcgctgcggctgcccggcgggcagcgcctgtacgtg
gccggggccccgcgcttccagcacaagggcaaggtgctcctcttcgagatggacgccctg
ggggccgtggcagtggcccaggcgctgacgggggagcagatcggctcctacttcggcagc
gaggtctgcgccctggacgtggacggcgacggggtcaccgacgtcctgctggtggcagct
cccatgtacctgggtgcccagagcagggagacggggagggtgtacctgtacagcgtgggg
cagcggctcctggcccccgccggcacgctgcatgccgacaagaagccacaggactcccgg
ttcggctacgccctggccgccgtgccggatctcaaccacgacggcttcaacgacgcggtg
gtgggggctccgctggaggacgggcaccgcggggccatctacgtctaccacggcgccccg
ggcaccctcctgccccattacaagcagcgcatcgaggcggcggcactgggtgccaccctc
agctatttcggccgcagcgtggacgggcagctggaccccgacggggacgggctggtggac
ttggccgtgggggcgcagggggcggccgtgctgctgcgctcccgtcagattgtccaggtc
aatacatcgctgacggtggagccttcgtccatcaacgtcatccagaagaactgccaacgc
ggcggcaccggcgccgtctgcctccgggccagggtctgcttccgcgccaggacccgagcc
cggggccggcgggacagggaggtcgagctgcggtacaacgtgtccctggaggagaggaca
gcgggagcccgggctgccttcgactcgggtgcccggcggctgctgcagcgtcgcctcgag
ctctcgctggggaggcagagctgcctccgcttccccttccacgtcctggacaccacggac
tatctgcgacccctcagcttcacggtgaggttggccatggccgaatccaccgggccggtg
ctggatgagacgtcccccaccaccatccggaaactgatccccttcttcaaggactgcggg
gaggacaatgagtgcgtcacggacctggtgctcagggccaccatggacatcgtgggctcc
aggcagagcccccacgtcctgcgcaagggcaggaggaaggtggtggtggacgtgggcctg
gagaacaagaaggagaacgcctacaacgccagcctgctcctccgcttctccagcaacctc
cacttctccagcctcgcgctccaggacaccagcccggtgaagctggagtgcacggcgctg
gccggtcaccgccggctctgcagcgtcggctaccccgtcttccgctcgctggccaaggtc
tccttcaccctggagttggagttcagctgctccgtcctcctcgaccgagccgaggtcgcc
ctcgaggccagcagcgacagcaccgaggcgacggtggaggacaacgcagtccggctttcc
acccccatccgctatgagcccgacctcttcctctccagcgacgccaacctgcaccgctac
gaggttcacccgctcggcaccttcccccacggccccggccccgaattcaagaccacagtg
aaggtgcagaattttgggtgctacccggtccgaaacgtcaccctccgcatggccctgcca
gccctgggctaccgccgtgccaccttcctctccgtcacaggcgtcctggccgacaacgcg
acctgcgtgctgcagaccccccccgaggagccccggcagcggggcacggccacggtggtc
cccgtgcaccccgaagacctcctgcacgtggacaggctggactgcggcaacgcctggtgc
caggagctgagctgccggctggggcggctggaccgcggcggggaggtttccatccacgtc
ctccgcgccgtccacaacgacttcttccgcggggcgaaattcaggagcgtgaaagtcgtc
agcacggtctggctgggggtcccggggagcagcgtgctggtgctggaggagggggcacat
cggagggagacggtgcttgaaatcatccaggcgaagcgggtgcccatctccctctggatc
ctggtgggcagcatcctgggggggctgctcctcctggcgctgatcatcttctgcctgtgg
aagctgggcttcttcacccgcaagaagctccccgaggaagaggaggagaaggaggaacag
tga
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