Calonectris borealis (Cory's shearwater): 142094307
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Entry
142094307 CDS
T11211
Symbol
ARNT
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator isoform X1
KO
K09097
aryl hydrocarbon receptor nuclear translocator
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
142094307 (ARNT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbor03000
]
142094307 (ARNT)
Transcription factors [BR:
cbor03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
142094307 (ARNT)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
PAS_9
Per3-like_PAS-A
bHLH_NCOA
bHLH_INO2
DUF3067
HAUS2
Motif
Other DBs
NCBI-GeneID:
142094307
NCBI-ProteinID:
XP_075032408
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Position
29:complement(4016473..4045601)
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AA seq
808 aa
AA seq
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MAATAANPEMASDVSSLGAAVSSGNPGPGAQAGGAIVQRANNKRRPGLDFDDDGEGNSKF
LRCDDDPMPNDKERFARSDDEQSSADKERLARENHSEIERRRRNKMTAYITELSDMVPTC
SALARKPDKLTILRMAVSHMKSLRGTGNTSTDGTYKPSFLTDQELKHLILEAADGFLFIV
SCETGRVVYVSDSVTPVLNQPQSEWFGSTLYDQVHPDDVGKLREQLSTSENALTEGTKPW
CLPNKDPAAPPENASKGRILDLKTGTVKKEGQQSMRMCMGSRRSFICRMRCGNSSVDPVS
VNRLSFMRNRCRNGLGAAKDGEPHYVVVHCTGYIKAWPPAGVSLPDDDPDAGQGSKFCLV
AIGRLQVTSSPNCTDMNNVCQPTEFISRHNTEGIFTFIDHRCVATVGYQPQELLGKDIVD
FCHPEDQQLLRDSFQQVVKLKGQVLSVMFRFRSKNREWLWMRTSSFTFQNPYSDEIEYII
CTNTNVKNSSQESRPALSNSMQRPQLGQSVNLPLEMGTAQLPSRQQQPPQQTELEVVPGR
ESLSGYDHSQVPVQPVTAAGPEHSKPLEKAESLFNQERDPRFGEIYSSINADQNKAIPAS
TVPANQPLFTQGNTFTPSRPAENFRSSSMVPPVNIIQQQPSSAGRILAQISRHSSPAQVS
GTNWAPGTRPAFTPQQVASQTVKTRPPSFSMGTFQGTPSSFSPMTAPGSTASPTGAAYPN
LASRGTGFTAEAAQTPAPFQTRAAEGVGMWPQWQGQHHGPASGEQHVQQPQPSQPEVFSD
MLTMLGDQGPNYNNEEFPELNIFPSFSE
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaccgccgccaacccggaaatggcatcagatgtttcctcgctgggtgcagcc
gtcagctctgggaaccctgggccaggtgcgcaagctggaggagccatcgttcagagagcc
aacaacaagaggcgtcctgggcttgattttgatgatgatggagaagggaacagtaaattc
ctcagatgtgacgatgacccgatgccaaatgataaagagagatttgccaggtctgatgat
gaacagagttcagcggataaggagagacttgccagggaaaatcacagcgagattgaacgt
aggcggaggaacaagatgactgcctacatcacagagctatcagatatggtgcccacctgc
agtgccctggcccgcaaaccagacaagctcaccatcttgcgcatggctgtctctcacatg
aagtccctgcgtggcacaggcaacacctccactgacggcacctacaaaccctcctttctc
actgaccaggaactcaaacacctgatcctagaggcagccgacggctttctgttcatcgtg
tcctgtgagaccgggagggtggtctatgtctccgattctgtgacccctgtcctgaaccaa
ccccagtccgaatggtttggcagcaccctgtacgatcaggtgcacccggatgacgtgggc
aagctgagggagcagctctccacatcggagaatgcgctgacagaaggaaccaaaccctgg
tgccttcctaacaaggatcctgcagccccccctgagaatgcatctaaaggtcgcatccta
gatttaaagacggggactgtcaagaaggagggccagcagtccatgaggatgtgtatgggt
tcacgaagatctttcatctgccgaatgaggtgtggcaacagctcggtggatccagtctct
gtaaatcgtctcagctttatgaggaatcgctgcaggaatggcttaggtgcagcaaaagat
ggcgaacctcactacgttgtggtgcactgcacgggttacataaaagcttggccccccgca
ggtgtttcactgcctgatgatgacccggacgctggccagggcagcaagttttgcctcgtg
gctattggcaggctccaggtcactagctcacccaactgcacagacatgaacaatgtttgt
cagccaacagagttcatctcccgacacaacaccgaaggcattttcaccttcatagatcac
cgctgtgtggctacggttggctaccagccacaggaacttctggggaaagacattgtggat
ttctgccacccggaagaccaacagcttttgcgggacagctttcagcaggtggtgaagtta
aaaggccaggttctgtcagtcatgttccgattccgatccaaaaaccgggaatggctctgg
atgagaaccagctcctttaccttccagaacccctactcggatgaaattgagtacatcatc
tgtaccaacaccaacgtcaagaactcgagccaggagtctcggcctgccctatcaaactca
atgcagaggccccagctggggcagagtgtcaaccttcccctggagatgggcacggcacag
ctgccctcaaggcagcagcagccgccacaacagacagagctggaagtggtcccgggaaga
gagagcctgtctggttacgaccactcacaggttcctgttcagcctgtgactgctgctggc
ccagagcacagcaagcccttggagaaggcagagagcctttttaatcaggagcgcgaccca
aggttcggcgaaatctacagcagtatcaatgcagaccagaacaaagccattcctgccagc
acagtgcctgccaaccagcccctctttacgcagggaaacactttcaccccatcgcgacct
gctgagaacttcaggagcagcagcatggtacctcctgtgaacattattcagcagcaaccc
tcatcagcgggccggatcttagcacagatttcacgccactccagcccagctcaggtcagc
ggaaccaactgggctccagggacacggccagcgttcacaccccagcaagtggcatcccag
acagtgaagactcggcccccttccttcagcatggggactttccaaggcaccccatcctcc
ttcagccccatgacagcacctggctctacggcttctcctacgggcgctgcttacccgaac
cttgccagccgtggcacgggcttcaccgcggaggcagcgcagacgcccgccccgttccag
acgcgggcggccgaaggtgtggggatgtggccgcagtggcaaggacagcaccacggccca
gcgtccggggagcaacacgtgcagcagccgcagccaagccagcctgaggtcttctcagac
atgctgacaatgctgggagaccaaggacccaactacaacaacgaagagttcccagagttg
aatatattcccttctttttcagaataa
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