Calonectris borealis (Cory's shearwater): 142094325
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Entry
142094325 CDS
T11211
Symbol
DENND4B
Name
(RefSeq) DENN domain-containing protein 4B isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbor04131
]
142094325 (DENND4B)
Membrane trafficking [BR:
cbor04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
142094325 (DENND4B)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_long
PPR_3
DUF2464
PPR
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
142094325
NCBI-ProteinID:
XP_075032445
LinkDB
All DBs
Position
29:complement(3453890..3464335)
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AA seq
1463 aa
AA seq
DB search
MSDEKPPQLVDYFVVAGLTDTSRPLEEESQQHRPARPSEPITDVAVIIRSQGEEVPHGFT
CIETTTSGHPVDLNAGLLNNPQMFICYKRGRDKPPLIELGVHYEGKDRPKPGYKILDTTP
YSRSANLNSGGPGHQRTFLTYRRAAEPHGHNTLGVTDICLIMPSKGESTPHTFCRVDKNL
NTSMWGPALFLCYKIAMAKANTLVYEAGLLGRYPEQDSESFPLPESVPVFCLPMGATIES
WPADTKYPLPVFSTFVLTGASGDKVYGAAIQFHEAFPRERLSEKQSLRLGLLSVVDRRPV
AGRSLQTRKSICVLSHWPFFDVFRKFLMFIYRYSISGPHVLPLETHISHFMHNVPFPSPQ
RPRILVQMSPYDNLLLCRPVSSPLPLSGASFLTLLQNLGPDNAVALLVAVLTEQKLLIHS
LRPDVLTSVGEALVAMIFPLRWQCPYIPLCPLALADVLCAPVPFIVGIHSSYFDLYEPPR
DVIFVDLDTNTIFQSEERKLLSPRSLPRRPCKVLLASLHSLSQQLDEMYSGPGEEASLEL
LLSDAEAARGRRAQLELEARAAFLRFMACALRGYRSFLRPIALAPAPAGRDTGSLFALQG
FLKSRERAYHRFYGQLLRTQLFTQFIEDCSFASDRDPCLEFFDTCVDKVQAELEKPEDAP
LMELDDARGGEHTVFITPPEQPAGPDGAELPARYRYDGFPTLRPELLEPPRDPLVAQLCQ
ARSSAPSSPAPRRTKQEMKVAQRVAQKYSSVPDMWAKCLLGHCYGLWFLYLPTHVRAAPA
KLRALQLAYDVLRKMEAHKVVLPDEVCYRILMQLCGQYGEPVLSVRVLLEMKRAGIVPNT
ITYGYYNKAVLESKWPAGTQGGRLRWAKLRNVVLGAAQFRQPLRQRERRAAAAPPGGRAP
PAPRPSLQRQTTWAGRSLRDPPPAPRLVKSGSLSFPGGTHGEGGRGGPGEPPTTRLPALS
AAPDPLPPRLRGPPGSAEGSLSDVSFATDESDRADEGPAGAGVPAGGTPRRGLAAKLQQL
LSPGKRPPLRPAASTELPTGPRDAADPACPRRGSEQRDGEPPPRRSPAETLLRPRERPES
TASESSVSLGSELDLSDTSVGSAGVPKSSEPLADGAVGQEPPAVEVLLSSCSRCQGCGAL
VYDEEVMAGWTSDDSNLNTTCPFCGRSFVPFLSIEIQDFRLPPSTAEDGSLPPPAAQGPV
LSDRRRCLALDEAEPELCNGCPDTAVPRRSERVAFAYLSPLVLRKELESLVENEGGEFLA
QPELVDSHPIIYWNLVWYFQRLGLPSNLPRLLLGSQHVAPAPQAQPPDSPCVRVRLLWDV
LAPEPDSCPPLYVLWRLHSNVPTRLRSWRPHGHPFSLAFLEAVLSHVGLNEVHKAIALFL
ETLAAPGGPWHLQRSIYREILFLTLAALGRDHMDIAAFDKKYKSAYNKLAGSLGKEELRR
RRAQPPSSKAIDCRKSFGATLEC
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgagaagcccccgcagctggtggactactttgtggtggccggactgacggac
acctcgcggccgctggaggaggagagccagcagcaccgcccggcccgccccagcgagccc
atcaccgacgtggccgtcatcatccgctcgcagggcgaggaggtgccccacggcttcacc
tgcatcgagaccaccacctcgggccaccctgtcgacctcaacgccgggctgctcaacaac
ccccagatgttcatatgctacaagcggggccgggacaagccccccctcatcgagctgggg
gtgcactacgagggcaaggaccgcccgaagccaggctataagatcctggacacgacgccc
tatagccgctcggccaacctcaattccggggggccgggccaccaacgcactttcctgacg
taccggcgggcggccgagccccacggccacaacacgctgggggtcactgacatttgcctc
atcatgcccagcaagggcgagagcaccccccacaccttctgccgcgtggacaagaacctc
aacaccagcatgtggggcccggccctgttcctgtgctacaagatcgccatggccaaggcc
aacacgctggtctacgaagcagggctgctgggacgttaccccgagcaggacagcgagtcc
ttccccctgcccgaatcggtgcccgtcttctgcctgcccatgggggccaccatcgagagc
tggccggctgacaccaagtacccgttgcccgtcttctccaccttcgtgctgaccggcgcc
tcgggcgacaaggtgtacggggcggccatccagttccacgaggcgtttccccgggagcgg
ctgtcggagaagcagagcctgcgcctggggctgctgagcgtggtggaccgacggcccgtg
gccggccgctcgctgcagacccgcaaaagcatctgcgtcctctcccactggcccttcttc
gacgtcttccgcaagttcctcatgtttatctaccgctactccatctcggggccccacgtg
ctgcccctcgagacgcacatctcgcacttcatgcacaacgtccccttcccgtccccgcag
cggccgcgcatcctggtccagatgtccccgtatgacaacctgctgctgtgccggcccgtg
tcctccccgctgccgctcagcggcgccagcttcctgacgctgctgcagaacctgggccct
gacaacgcggtggcactgctggtggccgtgctgaccgagcagaagctgctcatccactcc
ctgcgccccgacgtcctgaccagcgtgggcgaagccctggtggcgatgatcttccccctg
cgctggcagtgcccctacatcccgctgtgcccgctggcgctggctgacgtgctgtgtgcc
cccgtgcccttcattgtaggcatccactccagctacttcgacctctacgagccccccagg
gacgtcatcttcgtcgacctggacaccaacaccatcttccagagcgaggaacgcaaactg
ctgtccccccgctccctgccccgccggccctgcaaggtgctgctggcctcgctgcacagc
ctctcccagcagctggacgagatgtacagcgggccgggggaggaggcgtcgctggagctg
ctgctgagcgacgcggaggcggcgcggggtcggcgggcgcagctggagctggaggcgcga
gcggctttcctgcgcttcatggcctgcgccctgcggggttaccgctccttcctgcgcccc
atcgccctggcgcccgccccggccggccgcgacaccggcagcctcttcgccctgcagggg
ttcctcaagtcccgggagcgggcgtaccaccggttttacgggcagctgctgcgcacccag
ctcttcacccagttcatcgaggactgctccttcgccagcgaccgagacccctgcctcgag
ttttttgacacctgcgtggataaggtgcaggcggagctggaaaagccggaggatgcccct
ctgatggagctggacgacgcgcgggggggcgagcacaccgtcttcatcacccccccggag
cagccggcgggtcccgacggcgccgagctgcctgcgcggtaccgctatgacgggttcccc
accctgcgccccgagctcctggagcccccccgggacccgctggtggcccagctgtgccag
gccaggagcagtgcccccagcagcccggccccgcgcaggaccaagcaggagatgaaggtg
gcccagcgcgtggcccagaagtactcctcggtgcccgacatgtgggccaagtgcctgctg
gggcactgctacgggctctggttcctctacctgcccacccacgtccgcgccgccccagcc
aagctgcgggcgctccagctggcctacgatgtcctgcgcaagatggaggctcacaaagtg
gtgctgccggatgaggtctgctaccgcatcctgatgcagctctgcgggcagtacggggag
ccggtgctgtcggtgcgggtgctgctggagatgaagcgtgccggcatcgtgcccaacacc
atcacctacggctactacaacaaggcggtgctggagagcaagtggccggcgggcacccag
ggcgggcgcctgcgctgggccaagctccgcaacgtggtgttgggggccgcccagtttcgg
cagcccctgcggcagcgggaacgccgggcagccgccgcccccccaggcggccgagccccc
ccggcgccccgtcccagcctgcagcggcagaccacctgggctgggcgcagcctgcgggac
ccccccccggccccccggctggtgaagagcggcagcctcagcttccccggcggcacccac
ggtgaggggggccgggggggaccgggggagcccccgactacccggctccccgctctttcc
gcagccccggacccgctgcccccccggctgcggggtccccccggctcggccgaagggagc
ctgtcggacgtcagcttcgccacggacgagagcgaccgggcagacgaggggccggcgggt
gccggggtgccggcggggggcacgccgcggcgggggctggccgccaagctgcagcagctg
ctgtcccccggcaagcggcccccgctccggccggcggccagcaccgagctccccaccggc
ccccgcgacgccgccgaccccgcctgcccgcgccggggctccgagcagcgggatggggag
cccccgccacgccgcagccccgccgagaccctgctgcgcccacgggagcgccccgaatcc
accgcctccgagagctccgtctcgctgggcagcgagttggacctgtcggacacgtcggtg
ggcagcgccggcgttcccaagtcctccgagccgctggccgacggggcggtcgggcaggag
ccgcccgccgtggaggtcctgctgtccagctgctcgcggtgccagggctgcggcgcgctg
gtgtacgacgaggaggtgatggccggctggacctccgacgactccaacctcaacaccacc
tgccccttctgcggccgctccttcgtccccttcctcagcatcgagatccaggacttccgg
ctgccccccagcactgccgaggacggctccctccctcctcccgccgcgcagggaccggtg
ctcagcgaccgccgccgctgcctggccctggatgaggccgaaccggagctctgcaacggc
tgcccggacacggcggtgccgcggcggtcggaacgggtggctttcgcctacctgagcccg
ttggtgctgcgaaaggagctggaaagtttggtggagaacgaaggcggcgagttcctggcg
cagccggagctggtggacagccatcccatcatctactggaacctcgtctggtacttccag
cggctggggctgcccagcaacctcccccgcctgctcctgggctcccagcacgtcgccccg
gccccgcaggcgcagccccccgactccccctgcgtgcgcgtgcggctgctttgggacgtc
ctggcccccgagcccgacagctgccccccgctttacgtcctctggcggcttcacagtaac
gtccccacccggctgcggtcctggcggccccacggccaccccttctcgctggccttcctg
gaggccgtgctgagccacgtggggctgaacgaggtgcacaaagccatcgccctcttcctc
gagacgctggcagccccgggcggcccctggcacctgcagaggagcatctaccgggaaatc
ctcttcctcacgctggcggcgctgggcagggaccacatggacatcgccgccttcgacaag
aagtacaagtcggcctacaacaagctggcggggagcctgggcaaggaggagctgcggcgg
cggcgggcgcagccccccagctctaaagccatcgactgccgcaagagcttcggggccacc
ctcgagtgctaa
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