Candidatus Viadribacter manganicus: ATE48_00790
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Entry
ATE48_00790 CDS
T04422
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cbot
Candidatus Viadribacter manganicus
Pathway
cbot03030
DNA replication
cbot03430
Mismatch repair
cbot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ATE48_00790
03430 Mismatch repair
ATE48_00790
03440 Homologous recombination
ATE48_00790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbot03032
]
ATE48_00790
03400 DNA repair and recombination proteins [BR:
cbot03400
]
ATE48_00790
Enzymes [BR:
cbot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ATE48_00790
DNA replication proteins [BR:
cbot03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ATE48_00790
DNA repair and recombination proteins [BR:
cbot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ATE48_00790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
ANP44562
UniProt:
A0A1B1ADC8
LinkDB
All DBs
Position
complement(152449..155883)
Genome browser
AA seq
1144 aa
AA seq
DB search
MFGAENHMPQQFVHLRARSAYSLLQSAIQVKGLAKLAAKHQMPALGLTDANNLFGALEFS
EAASELGVQPIVGLTLDVRGDHGLKGAFALIAQSEAGYTNLMQLSSAAYLEAESHDEPHV
LFSRLLQHSEGLIALTGGGESALAPLISEGKIDIAVDTLKQLGHAFPNRLYVELQRHSEL
IEVESEGPLLEMAYDLGLPIVATNDIRFEKKADHGAHDALLCIAASSYLGAEDRPRVTHQ
HYFRSADEMAALFSDLPEALESTIEIARRTAYKVEKRKPILPRFDTKRGRDEAAELKAQA
EAGLKERVKALGDKLAAPLEDYEKRLAYELSVITQMQFPGYFLIVSDFIKWAKSNDIPVG
PGRGSGAGSVVAWALTITDLDPLRWGLLFERFLNPERVSMPDFDIDFCQERRGEVIEYVK
NKYGEDRVAHIITFGTLQARAVLRDVGRVMQLPFGQVDKLAKLVPANPANPVTLAQAMEI
EPKLQEAKRNEAEVRELIDTALQLEGLYRNASTHAAGVVIGDRPLIELVPLYRDPRAHLP
ATQFNMKWVEAAGLVKFDFLGLKTLTVIDRAVKFIRARGEKIDLNTGDYGDEATYRLMQS
GLTFGVFQLEGQGMRDTLRKVKPTTLEDVIALISLYRPGPMKNIDRFANVKHGREQPDYL
HETLKPILEETYGVIVYQEQVMQIAQVLSGYSLGEADLLRRAMGKKQPAEMAKQKSRFIE
GAKEKGVSENLASHIFDLVEEFAGYGFNKSHAAAYAVVAYQTAFLKAHYPVDFIAASMSL
DLSNSDKLASFVQDAKRVHVPMLPPDLNNSEADFNVEKTEDGLAVRYALGAVRNVGLVAM
ASVVEERKRKGKFKALHELAERIDAKAINRRQLENLAKSGAFDGFEPDRARALAACEIVA
AYAQRVAEERASSQASLFGSEEPSARPVFPKAPAWSAQDRLDAERESVGFYLSGHPLSDF
FVDAGDRYSSYADIVEEGETEPRAYMMAGVVRRIQYRPAMSGGTLAFVSMSDPTGDFEGM
IMPENVQAARDVIEVGKAFGFRGRVRWRDGDMKLAADSFEPVEAAEARIGDDLRIVLREG
APLDLLLQTLSALPKAQPGEARPLHLVLRLNDGREIELNTGRLASASPAARSALKAARGV
ERVI
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atctttggggcggagaatcatatgccccagcagtttgttcatctccgagcgcgttcggcc
tattcgctgctgcagagtgcgatccaagttaaggggctcgcgaagctcgcggccaaacac
cagatgcctgcgcttgggctcacggacgccaacaacctgttcggcgcgcttgagttctca
gaagccgcgtcagaattgggcgttcagccgattgttggtctcactctcgatgtacgcggt
gatcatgggttgaaaggggcgttcgcgctcatcgcccaaagtgaggcaggttacacaaat
ctgatgcagctctcgagcgctgcctatctagaagcggaatcgcacgatgaacctcacgtt
ctgttctcgcgtcttctgcaacactcagaaggtctgattgcgctaaccggcgggggcgag
agcgcacttgctccgttaatctccgagggcaagatagatattgccgtcgataccttgaag
caactcggccacgccttccccaatcgcctctatgtcgaacttcagcgtcatagtgaactc
atcgaggtcgagagcgaaggtccgctgcttgagatggcgtacgaccttggtctgcccatc
gtcgcgacgaacgacattcgtttcgaaaagaaggccgatcacggggcgcatgatgcgctg
ctctgcatcgcggcatcatcgtatctcggcgccgaagatcgcccgcgtgtaacgcaccag
cattactttcgttctgccgatgagatggccgcgctcttttccgatctgccggaggcgcta
gagagcaccatcgagattgcacgccggactgcttacaaagtcgagaagcgcaaacccatc
ttgccgcgcttcgacaccaagcgcggccgcgacgaggctgccgagttgaaggcgcaggcc
gaggctggcctaaaggagagggtcaaggcgctcggagataaactcgcagcgccgcttgag
gattacgagaaacgacttgcgtacgagctttctgttatcacgcagatgcagttcccgggc
tacttcttgatcgtctcggactttatcaagtgggcgaagtcgaacgacattccggtggga
cctgggcggggctcaggcgcaggctcggtggtagcctgggccctgaccatcacagatctt
gatccgctacgttggggcctactgttcgagcgcttcttgaatccagagcgcgtgtcgatg
cccgacttcgatatcgacttctgccaggaacgacgtggcgaagttatcgaatacgtgaag
aacaagtacggggaagatcgcgtcgcgcacattatcaccttcggcacgctgcaagcgcgc
gccgtgcttcgcgacgtcggacgcgtgatgcagttgccgtttggccaagtcgataagctg
gcaaagcttgtgccagcgaaccccgcaaaccccgtcacgctggctcaggcgatggagatc
gagccgaagctgcaagaggcgaagcgaaacgaggcggaggtccgcgagctcatagacacg
gcgttgcagctagaggggctttatagaaacgcatcgacacacgctgccggcgttgtgatc
ggcgatcgtcccctcattgagttggtgccactctatcgcgatccacgggcacatttgccg
gccacccaattcaacatgaagtgggtcgaagcagcgggcttggtgaagttcgactttcta
gggctgaagacgctcacggtgatcgaccgcgccgtgaaattcatccgggctcgcggtgaa
aagatcgatctcaacaccggagactacggcgacgaggcgacctacaggctcatgcaatcg
ggtctgaccttcggggtgtttcaactcgaaggtcaggggatgcgggacaccctgcgcaaa
gtgaagcctacgacgctggaagacgtcatcgcgctgatttcgctctatcgcccggggccg
atgaagaacatcgatcggttcgcgaatgtaaagcacggtcgtgagcagcctgattatctg
cacgagactttgaagccaattctcgaagaaacatacggcgtcatcgtctaccaagagcag
gtgatgcagatcgctcaggtcttgtccggctacagtcttggcgaggccgacttgctgcgt
cgtgcgatgggcaaaaagcaacccgcggagatggcgaagcaaaaatcacgtttcatcgag
ggcgcgaaggagaagggtgtcagcgagaacctggcctcacacatcttcgatctcgtcgaa
gaattcgccggctatggattcaataaatcacacgccgctgcgtacgccgtggttgcgtac
cagactgcattcctaaaggcgcattatcctgtcgattttatcgcggcctctatgagcctt
gacctttcaaattcggacaagcttgcgagcttcgtgcaagacgccaagcgcgttcacgta
cccatgctgcctcccgacctcaacaattccgaagccgactttaacgttgagaaaaccgag
gatggtttggcggtgcgttacgcccttggtgctgtgcgtaacgtcgggcttgtcgcgatg
gcgagcgtggttgaggagcggaagcggaaggggaagttcaaggcgctgcacgaattggcg
gaacggatcgatgccaaggccatcaaccgccggcagcttgaaaacctagccaagtccggc
gctttcgacggttttgagcccgatcgcgccagggcgcttgctgcttgtgaaattgttgca
gcgtatgcgcaacgcgttgctgaagaacgcgccagttcgcaggcgagtttgttcggttcg
gaagaaccgagcgcgcgtcctgtctttccaaaggcgccggcctggtccgcgcaagatcgt
ctggatgcggagcgagagagtgtaggcttctatctttctggtcacccgttgtcggacttt
ttcgtcgacgctggtgatcgatattcaagctacgccgatattgtcgaagagggtgagacc
gagccgcgggcctacatgatggccggtgtggtgcgccgcattcagtatcggcccgccatg
tcaggcgggaccttggcgttcgtctcgatgagcgatcctacgggcgacttcgaaggcatg
atcatgcccgagaacgtgcaggctgcacgcgacgtgatcgaggttggtaaagcgttcggc
ttccgcggccgggttaggtggcgcgacggcgacatgaagctcgccgcagattcctttgaa
ccagtcgaagctgcagaagctcggatcggagatgaccttcgcatcgtgttgcgcgagggg
gcgcccctagatttgttgctccagacgctgtcagcgctgccaaaagctcagcccggggag
gcgcgcccgcttcatctcgtgttgcgcctcaatgatggccgcgagatcgaactcaatacc
ggccgcttggcctcggcaagtcccgccgcgcggtcagcattgaaggcggccagaggggtt
gagcgcgtcatctga
DBGET
integrated database retrieval system
