Candidatus Viadribacter manganicus: ATE48_01275
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Entry
ATE48_01275 CDS
T04422
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
cbot
Candidatus Viadribacter manganicus
Pathway
cbot03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cbot00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ATE48_01275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbot03021
]
ATE48_01275
03400 DNA repair and recombination proteins [BR:
cbot03400
]
ATE48_01275
Enzymes [BR:
cbot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ATE48_01275
Transcription machinery [BR:
cbot03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ATE48_01275
DNA repair and recombination proteins [BR:
cbot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ATE48_01275
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
EF-hand_5
Y4rL_C
Motif
Other DBs
NCBI-ProteinID:
ANP44647
UniProt:
A0A1B1ADL3
LinkDB
All DBs
Position
complement(238709..239059)
Genome browser
AA seq
116 aa
AA seq
DB search
MARVTVEDCVEKIPNRFSLVLLAAHRARNISSGAEPLVDRDRDKDPVVSLREIGDGAITP
EELRDSYVMLYQDVQPAAQAEDEQDRLALAAPVETSEDDVLRALQQEAEAQRDERY
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
ttggctcgcgtaaccgttgaagattgcgtagaaaagatcccgaaccggttttcgctggtg
ctgctggccgcgcaccgcgcgcgcaacatttcctccggcgccgagccgcttgtggatcgc
gaccgcgataaagatccggttgtttcccttcgtgaaatcggcgacggcgcgattacgccg
gaagagctgcgcgacagttatgtgatgctctaccaagacgtccaaccagccgctcaagcc
gaagacgagcaagatcgtctggcgctcgccgctccggtcgagaccagcgaagacgacgtg
ctgcgcgcgctccagcaagaagctgaagctcaacgcgacgagcggtactag
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