Candidatus Viadribacter manganicus: ATE48_01700
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Entry
ATE48_01700 CDS
T04422
Name
(GenBank) hypothetical protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
cbot
Candidatus Viadribacter manganicus
Pathway
cbot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ATE48_01700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbot03019
]
ATE48_01700
03009 Ribosome biogenesis [BR:
cbot03009
]
ATE48_01700
Enzymes [BR:
cbot01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
ATE48_01700
Messenger RNA biogenesis [BR:
cbot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ATE48_01700
Ribosome biogenesis [BR:
cbot03009
]
Prokaryotic type
rRNA processing factors
ATE48_01700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
ANP44726
UniProt:
A0A1B1ADU7
LinkDB
All DBs
Position
331022..333334
Genome browser
AA seq
770 aa
AA seq
DB search
MAKKMLIDAAHPEETRVAVLDGSRVEDFDFEVASRKQLRGNIYLAKVTRVEPSLQAAFVE
YGGNRHGFLAFSEIHPDYYAIPHDDQEAIKAELAKAEEESENEEEDDEARDERRRRILTR
RYKIQEVIRRRQIMLIQVVKEERGNKGAALTTYLSLAGRYCVLMPNTGRGGGISRKITQA
TDRKRLKKIATDLEVPQGQGLIIRTAGAKRTKTEIKRDYEYLSRAWETIRDETMKSVAPA
LIYEESSLVKRAIRDLYDKDVDEIHVDGEGAYKEAKDFVRMLMPSHAKRVHLWKDSTPIF
AKQGVEKQLESIYSPIVHLKSGGYIVINQAEALVAIDVNSGRATRERNIEQTAFKTNLEA
ADEAARQMRLRDLAGLIVIDFIDMEESKNDRVVEKRMKDNLRFDRARVQMGKISGFGLLE
LSRQRRRTGVLEGTSHVCEHCQGSGRVRSVESASLALLRALDEAAAKKKNRLIEARTASD
TAIYLLNEKRDALATIEENNHVRVRIGTSAAMHSGDFEIIVLDGGYEEDEEAEATPARGR
KQQRRDVEIEAEEADALAAAASSDDEVEDEIEDGAEDEAEATPRVVAGADSDAESDDRKR
RRRRGRRGGKRRREGEDGETVETRGEDNSETPKPAAAREERGGRNRRRRRGRGRGRRVYE
VDGGEWLDFVSADLKHLTPRPERPARNGDARRVETAAGVGEDAPVREAEIIVHPAAEPVA
EVHHEAPSPVVMAQVEPVAVAATPDAPAYEPDQERRDKFFSRLSRWSKKN
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaaaatgttgatcgacgccgcgcacccggaagaaacccgggtcgcggtgctc
gacggaagccgcgttgaagatttcgattttgaggtagccagcagaaaacaactcagaggc
aatatctatctcgccaaggtgacgcgcgtggagccgtcgctacaggctgcctttgtggag
tacggcggcaaccgtcacggcttcctcgccttctctgaaatccacccagactattacgcg
atcccgcacgacgatcaggaagcgatcaaagcggaactcgccaaggccgaagaagaaagc
gaaaacgaagaagaagatgatgaggcgcgtgatgaacgccgccgccgcatcctgacgcgc
cgctacaagatccaagaggtcatccgccgtcgccagatcatgttgatccaggtggtcaag
gaagagcgcggcaacaaaggggccgccctcacgacctacctctcgctggcaggccgctat
tgcgtcctgatgccgaacaccggccgcggcggtgggatctcgcgcaaaatcacgcaagcg
accgaccgcaagcgtttgaagaagatcgcgaccgatcttgaagtgccgcaagggcaaggt
ctgatcatccgcaccgccggcgccaaacgcaccaaaaccgagatcaaacgagactacgaa
tacctctcacgcgcgtgggagacgatccgcgacgaaaccatgaagtcggtcgcgccggct
ctgatctacgaagaaagctcgctcgttaagcgcgcgatccgcgacctctacgacaaagac
gtcgatgaaattcacgtcgatggcgagggcgcgtacaaggaagccaaagacttcgtgcgg
atgctcatgccgagccacgcgaagcgcgttcatttgtggaaagattcaacgccaatcttc
gccaagcaaggcgtcgaaaagcagcttgaatcgatctactcgccgatcgtccatctaaag
agcggcggctacatcgttatcaaccaagccgaagcgctcgtcgccatcgacgtgaactcc
ggccgcgcaacgcgcgaacgcaatatcgaacagaccgcgttcaagacaaaccttgaagcg
gccgacgaagcggctcgccagatgcgccttcgcgacctcgccggcctcatcgtgatcgac
ttcatcgacatggaagagtcgaagaacgatcgggtcgtcgaaaagcggatgaaagacaat
ctccgcttcgatcgcgcacgcgttcagatgggcaagatcagcggctttgggttgctggaa
ctctcgcgccagcgtcgtcgcaccggcgtgctcgagggcaccagccacgtctgtgaacat
tgccagggctcgggccgcgttcgatcggtcgaaagcgcctcgcttgctttgctgcgtgca
ctcgatgaggccgctgcaaagaagaagaaccgtctgatcgaagcgcggaccgcgtcggat
acggcgatctaccttctcaatgaaaagcgcgacgcactcgcgaccatcgaagagaacaat
cacgtccgtgtccgcatcggcacgtcagctgcgatgcactccggcgacttcgaaatcatc
gtcctcgacggtggttacgaagaggacgaagaagccgaggccacgccagcgcgcggccgc
aagcaacaacgccgcgacgtcgaaatcgaagccgaagaggcagacgccctggccgccgcc
gccagcagcgatgatgaagttgaagacgagatcgaagacggcgccgaggacgaagcggaa
gcaacgccccgtgtcgtcgcgggcgccgactctgacgccgaaagcgatgatcgcaagcgc
cgccgccgccgtggccgccgcggtggcaagcgccgccgtgaaggtgaagacggtgaaaca
gtagagacgcgcggcgaagataacagcgagacgccaaagccggcagctgcacgtgaagaa
cgcggcggccgtaatcgccgccgccgtcgcggccgcgggcgtggccgtcgtgtgtatgag
gtcgatggcggcgaatggctggatttcgtcagcgccgatctcaagcatctcacgccccgc
cctgagcgtcctgcccgcaatggcgatgcacgacgcgtcgagactgccgcaggggtcggt
gaagacgcgccagtgcgtgaggccgagatcatcgtgcatcccgcggccgagccggtcgct
gaagtccatcacgaggcgcccagcccagtggtgatggcgcaagtagaacctgttgccgtt
gccgcaacgccggacgcacccgcctacgagccagaccaagagcgccgtgacaaattcttc
tcgcgcctgtcacgttggtcgaagaagaactga
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