Candidatus Viadribacter manganicus: ATE48_01845
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Entry
ATE48_01845 CDS
T04422
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cbot
Candidatus Viadribacter manganicus
Brite
KEGG Orthology (KO) [BR:
cbot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbot03016
]
ATE48_01845
Enzymes [BR:
cbot01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
ATE48_01845
Transfer RNA biogenesis [BR:
cbot03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ATE48_01845
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
ANP44752
UniProt:
A0A1B1ADX1
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All DBs
Position
357597..358745
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AA seq
382 aa
AA seq
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MRVITKTADLEALCQDMAQQPFVAVDTEFMRETTYWPKLCLIQAAAPGVEAVIDPLAEGL
SLAPFMELMANEKVLKVFHAARQDLEIFLKIGGKLPHPVFDTQIAAMACGYGDTVAYDAL
VQQVLKRRLDKSSRFTDWSRRPLSDAQLEYALADVTHLRDIYPRMHAKLESEGRLSWLDE
EHEYLLDANIYDTTPEKSWNRLKLRKTTADYVLGLQVAAAWRERQAQQRDVPRGRIVKDE
ALYEIAEQRPKNAADFDRMRAVPRGFGNSRAAQELIQALDRAFSDPNRPVYKHERPPPVP
PGLGPTVELLKVLLRYEAERHNVAPRLIASAPEVEEIAADDNASVAALKGWRREVFGERA
LALKHGKLALKLKDGKVSVDDV
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttatcaccaagaccgccgacttggaggcgctgtgccaggacatggcgcagcag
cccttcgtcgcggtcgatacagagttcatgcgcgagacgacgtattggccgaagctgtgc
ctgatccaggccgctgcgccgggcgtggaagccgtgatcgacccgctcgcagaaggcctc
tcgctcgcgccctttatggaattgatggccaacgagaaagtcctgaaggtctttcacgcg
gcccggcaagatctcgaaatcttcctcaaaatcggcggcaagcttccgcaccctgtgttc
gacacgcaaatcgcagccatggcgtgcggttacggcgacaccgtcgcctacgatgcgctc
gtccaacaagtgctgaagcggcggttggataagtcatcacgcttcacagattggagccgc
cgcccgctttccgacgcccagctcgaatacgcgctcgccgacgtcacccacctgcgtgac
atctatccgcggatgcacgcgaagctcgaaagcgagggccggctctcgtggctcgacgaa
gagcatgagtatctgctcgacgccaatatctacgacaccacgccggagaaatcctggaac
cgcctcaagctccgcaagaccacggctgattacgtgctcggcctgcaagtcgccgccgcg
tggcgtgaacgccaagcgcagcagcgcgatgtcccgcgcggacgcattgtcaaagacgag
gcgctctacgagatcgccgaacagcgccccaagaacgccgccgatttcgaccgcatgcgc
gccgtgccgcgtggcttcggcaattcgcgcgcagctcaagaactcatccaagcgctcgat
cgcgccttcagcgacccgaaccggcctgtttacaagcacgagcgtccgccgccggtgccg
ccaggcctcggccccaccgtcgaactcctaaaggtgctgctccgttacgaagccgaacgc
cacaacgtggccccaaggctgatcgcatccgcgcctgaagtcgaagaaatcgccgccgac
gacaacgccagcgttgctgctttgaaaggctggcggcgcgaggtctttggcgaacgcgcc
ctggcgctgaagcacggcaaactcgcgctcaaactcaaagacggaaaagtcagcgtcgac
gacgtctaa
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