Candidatus Viadribacter manganicus: ATE48_02870
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Entry
ATE48_02870 CDS
T04422
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cbot
Candidatus Viadribacter manganicus
Brite
KEGG Orthology (KO) [BR:
cbot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbot03009
]
ATE48_02870
Enzymes [BR:
cbot01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ATE48_02870
Ribosome biogenesis [BR:
cbot03009
]
Prokaryotic type
ribosomal protein modification factors
ATE48_02870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
ANP44940
UniProt:
A0A1B1AEF1
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All DBs
Position
555665..556990
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AA seq
441 aa
AA seq
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MSAKAPTIGVVSLGCPKALVDSERIITRLRSEGYQLSGSYEGADLVVVNTCGFLDSAKAE
SLDAIGEAIAENGKVIVTGCLGKEENLIRQAHPKVLEITGPHQYEAVVGAVHTHLPQLHD
PKIDLVPEGGFRLTPRHYAYLKISEGCNNRCTFCIIPSIRGDLVSRRANAVLKEAEGLVK
AGVKELLVISQDTSAYGVDLKYAESKWKDRMVRAKFYDLCKELGDLGAWVRLHYVYPYPH
VDEVVALMAEGKVLPYLDIPFQHASPNVLKAMRRPANQDKVLDRIKAWRKICPDLTIRSS
FIVGFPGETEDDFETLLDFIEEAEIDRAGVFKYENVDGAPSRDLPGHIDQDDVDERYDRF
MEAQTALAHQRLQSMIGKTVDAICDGWDEDAEAYAFRTKADAPEIDGVTYVDSDDEIAEG
TICQLEILGGEGHEMVGALKD
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcaaaagcccccaccatcggcgtcgtttcactcggctgccccaaagccctcgtc
gacagcgagcgcatcatcacgcgcctgcgctccgaaggctatcagctcagcggctcctac
gaaggcgccgaccttgtcgtcgtgaatacgtgcggcttcctcgatagcgccaaagccgaa
agcctcgacgccatcggcgaagccattgccgagaacggcaaagtcatcgtcaccggctgc
ctcggcaaagaagaaaacctgatccgccaagcgcacccgaaagtgctggagatcaccggc
ccgcaccaatacgaggccgtcgtcggcgccgtgcacacgcatctgccgcagctgcacgat
cccaaaatcgatctcgtgcccgaaggcggcttccgcctcacgccgcgccactacgcgtat
ctgaagatctccgaaggctgcaataatcgctgtaccttctgcatcatcccatcgatccgc
ggcgacctcgtctcgcgccgcgccaacgccgtgctgaaagaggccgaaggcttggtcaaa
gccggcgtcaaagaactgctggtcatctcgcaggacacgtcggcctacggcgttgacctc
aaatatgccgagagcaaatggaaggaccgcatggtccgcgccaaattctacgacctctgc
aaagagctcggcgacttgggcgcatgggtgcgcctccactacgtctatccctatccgcac
gtcgacgaagtcgtcgctctgatggccgaaggcaaagtactgccctacctcgacatcccg
ttccagcacgcctcaccaaacgtgctgaaggccatgcgccgccccgcgaaccaggacaaa
gtcctggatcgcatcaaggcgtggcgcaaaatctgccctgacctcaccatccgttcgagc
ttcatcgtcggcttccccggtgaaaccgaagacgatttcgaaaccctgctcgatttcatc
gaagaagccgaaatcgatcgcgccggcgtgttcaaatacgaaaacgtcgacggcgcgccc
tcacgcgatctccccggccacatcgatcaagacgacgtcgatgagcgctacgatcgcttc
atggaagcgcagaccgcgctcgcccaccagcgcctccaatccatgatcggcaaaaccgtc
gacgcgatctgcgacggctgggacgaagacgccgaagcctacgccttccgcaccaaggcc
gacgcacccgaaatcgacggggtcacctatgtcgatagcgacgacgaaatcgccgaaggc
acgatctgccagctcgaaatcctcggcggcgagggccacgaaatggtcggcgcgctaaag
gactaa
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