Candidatus Viadribacter manganicus: ATE48_09415
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Entry
ATE48_09415 CDS
T04422
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cbot
Candidatus Viadribacter manganicus
Pathway
cbot03420
Nucleotide excision repair
cbot03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ATE48_09415
03430 Mismatch repair
ATE48_09415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbot03400
]
ATE48_09415
Enzymes [BR:
cbot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ATE48_09415
DNA repair and recombination proteins [BR:
cbot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ATE48_09415
MMR (mismatch excision repair)
Other MMR factors
ATE48_09415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
HHH
AAA_11
HHH_3
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ANP46123
UniProt:
A0A1B1AHT3
LinkDB
All DBs
Position
complement(1827746..1829767)
Genome browser
AA seq
673 aa
AA seq
DB search
MSRITSVALDDLNAEQRAAVEHGSAPLLVIAGAGSGKTKTLSCRVAHLVANGADPSRILL
LTFSRRAASEMIARVGKVMAGDVRIPWAGTFHAIGARLLRELAPVIGIDPEFTIHDRSDS
ADLMSMVRQELGVATGAKRFPMKGTCLAIYSRVVNADESIDDAVVAQFPWCREWTAELKT
LFGAYVEAKQKQNVLDYDDLLWLWAEAMNEPALAAEVGARFEHVLVDEYQDTNKLQARIL
LAMKPDGRGVTVVGDDAQSIYSFRAADVRNILEFPKAFTPEARLVTLEQNYRSTSPILDA
SNAVIDLAKERFTKNLRTTRSGGTAPKLVSVRDEAAQASYIAESVLEARERGLTLMQQAI
LFRAADFSAPVELELAKRDIPFVKFGGLKFLEAAHVKDFLAILRWAQNGGDRIAGFRTLQ
LVPGVGPAKAARILDAVDEFGPYGAVRNTAPPAGAAEAWDALKEMLAAMEKTPAWPSDLD
LAARWYTPMMNERYDDARVRAGDIDQLQRIGATFGGRTSFLTELTLDPPNSTSDESGKSS
KDDDYLILSTIHSAKGQEWKNVFVLNVVDGCMPSDLGTGSTAALEEERRLLYVAMTRAKD
ELHLITPQRFYHTQQSRGGDKHVYAIKSRFLPEYVCSKFQQTAWAPEPAPGEAGANGPLP
KIDLAAKARSRFS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgaatcacgtcggttgcgctggatgatctgaacgctgagcagcgtgcggcggtg
gagcatggctctgcgccgttgctggtgattgcgggtgcggggtcggggaagacgaagacg
ttgtcttgccgcgtggcgcatcttgttgcgaatggcgccgatccgtcgcgcattctgttg
ctgacgttttcgcggcgggcggcgagtgagatgattgcgcgcgtcggcaaggtgatggcc
ggcgatgtgcgtattccgtgggccgggacgtttcacgcgattggcgcgcggctgttgcgg
gaactggcgccagtgatcggcatcgatccggagttcaccatccacgatcgcagcgatagc
gccgatctgatgagcatggtgcgccaggagcttggcgtcgcgacgggcgcgaaaaggttt
ccgatgaaggggacgtgcctcgcgatttattcgcgcgtcgtgaatgcggatgagtcgatc
gacgatgcggtggtggcgcagtttccatggtgccgcgagtggaccgcggagctgaagacg
ctgttcggcgcgtatgtcgaagccaaacagaagcagaacgtgttggattacgacgatctg
ctttggctctgggccgaggccatgaatgagccggcgctcgcggccgaagttggcgcgcgg
ttcgagcacgttctggtcgatgaatatcaagacacgaacaagctgcaggcgcgcattctg
ttggcgatgaagccggatgggcgcggcgtgactgtggtcggcgatgatgcgcagtcgatc
tattcgttccgcgcggcggatgtgcgcaatattctggagtttccgaaagcgtttacgccg
gaggcgcggctggtgacgctggagcagaactatcgctcgacgtcaccgatcttggatgcg
tcgaacgcggtaatcgatctggcgaaggagcgcttcaccaaaaatctgcgcacgacacgc
agcggcggaacggcgccgaagctggtgagcgtgcgtgatgaggcggcgcaggcgagttac
atcgccgagagcgtgcttgaggcgcgcgagcgcgggctgactttgatgcagcaggcgatc
ctctttcgcgcggcggatttttcggccccggtggagctggagctggcgaagcgcgacatt
ccgttcgtgaaattcggtggcctgaagtttcttgaagcggcgcatgtgaaggattttctg
gcgatcctccgttgggcgcagaatggcggcgatcggatcgcgggatttcgtacgttgcag
ctcgtgccgggggttgggcccgcgaaggcggcgcgcattctggatgcggtggatgagttc
ggcccctatggcgcggtgcgcaacactgcgccgccagcgggcgcggctgaggcgtgggat
gcgttgaaagaaatgcttgccgcgatggagaagacgccggcctggccaagcgatcttgat
ttggcggcgcgttggtacacgccgatgatgaacgagcgctatgacgacgcccgcgtgcgc
gctggtgacatcgatcaattgcagcgcatcggtgcgacgtttggcgggcgcaccagtttc
ttgaccgagctcacgctcgatccgccgaactcgacgagcgatgagagtggcaagtcatcg
aaggacgacgactatctgatcttgtcgacgatccattcggccaaggggcaggaatggaag
aatgtgttcgtgttgaatgtggttgatggctgcatgccgtccgatctcggcacgggatcg
acggcggcgttggaagaggagcggcggctgctctacgtggcgatgacgcgcgcgaaggat
gagctgcatctcatcacgccgcagcggttctatcacacgcagcaatcgcgcggcggcgac
aagcacgtgtatgcgatcaaatcgcgcttcttgcctgaatatgtgtgctctaagtttcag
cagacggcatgggcgccggagcctgcgcccggcgaagctggtgcgaacgggccgttgccg
aagatcgatcttgctgcgaaggcgcgctctcggttcagctga
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