Candidatus Viadribacter manganicus: ATE48_10855
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Entry
ATE48_10855 CDS
T04422
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cbot
Candidatus Viadribacter manganicus
Brite
KEGG Orthology (KO) [BR:
cbot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbot03016
]
ATE48_10855
Enzymes [BR:
cbot01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ATE48_10855
Transfer RNA biogenesis [BR:
cbot03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ATE48_10855
Prokaryotic type
ATE48_10855
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ANP46378
UniProt:
A0A1B1AIJ4
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All DBs
Position
2109273..2110226
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AA seq
317 aa
AA seq
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MGRRKKGDDVSGWVVLDKPDDMTSTHAVSAVRRIFNAQKAGHAGTLDPLASGILPIALGE
ATKTVPWLMEARKTYLFTIKWGVSTDTQDREGKEVASSPVRPTPEAIGAALLAFIGDIQQ
VPPQFSAVKVDGERAYDLARSGETVELEPRQVTVYEAELVETDGDLATFRFRSGKGFYIR
ALVRDLAAKLGAEGHVWRLRRTAVGPFTEADSVTLDALVDLGHKGAASERLKPVETALDD
IPALAINGEDAFKLRQGRPIVLLPHVVETLKPQFRDRLIGGVDASRAALALYEGKAVALG
DVRAGRFEPSRVFNISD
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgggccgccggaagaaaggcgacgatgtttccggctgggtcgtgctcgacaagccggac
gacatgacctcgactcacgcggtttctgccgtccgccgcatcttcaatgcgcagaaggcc
ggccacgccggtacactcgatccgctggcttccggcatcttgccgatcgcgttgggcgag
gcgacgaagactgtgccgtggctaatggaggcgcggaaaacgtacctcttcacgatcaaa
tggggtgtctcgaccgatacccaggatcgcgaaggcaaagaggttgcgtcctcgccggtt
cggccaacgccggaggccattggcgcggcgctgctcgcgttcatcggcgacatccaacag
gtgccgccgcagttcagcgccgtaaaggtcgacggcgaacgcgcttacgatcttgcccgc
tcgggcgagaccgttgagctcgagccgcgccaggtcacggtctacgaggccgagctcgtc
gagaccgatggcgacctcgccaccttccggtttcgctccggaaaaggcttttatatcaga
gctttggttcgcgatcttgcggccaaattgggtgcggaggggcacgtttggcgcctccgc
cgcaccgccgtcggccccttcaccgaggccgattctgtcaccctcgacgcgcttgtggat
ttaggtcataagggcgccgcgtcagaacgccttaaacccgttgagaccgcgctggacgac
atcccggcactggccatcaatggagaggacgcgttcaagctcagacagggacggccgatc
gtcctcctcccgcatgtggtggagacgttgaagccgcagtttcgagatcgccttatcggc
ggtgtcgatgcgtcccgggcggcattggctctctatgagggcaaggccgtggctctgggt
gacgtgcgagccgggcgctttgagcctagccgcgtgttcaacatctctgactaa
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integrated database retrieval system
