Candidatus Viadribacter manganicus: ATE48_11895
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Entry
ATE48_11895 CDS
T04422
Name
(GenBank) hypothetical protein
KO
K10979
DNA end-binding protein Ku
Organism
cbot
Candidatus Viadribacter manganicus
Pathway
cbot03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cbot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
ATE48_11895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbot03400
]
ATE48_11895
DNA repair and recombination proteins [BR:
cbot03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
ATE48_11895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
ANP46569
UniProt:
A0A1B1AJ28
LinkDB
All DBs
Position
complement(2312236..2313156)
Genome browser
AA seq
306 aa
AA seq
DB search
MAPPARPVWTGQIRLALVALPVKLYSALDSKEKISFNQIHEPSKQRIRYEKVAPGIGAVD
KDEIVKGYEYQKGRYVLFSDEEFEALKVDSKKTLDMVQFAPADTIDPIYFDKPYYALPDG
KMADEPYRVVSEALKKTKTVGLGQITMRGRSYIAAVKPYEGGLIVETVHYAEELRKANLF
FDEIPSGKLDADLVDLAEELITRKKAKFDPNKFEDEYAIAIERLVKKKIERHGELILEDQ
EEPSRDHGDNVVSLVDALKKSLAKKSKIVGEEEEASAPKRRAAAERTKTTRAKAPAKTPA
KKRAKK
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctccagctcgtccagtttggacagggcaaattcggctcgcgctcgtcgcgctg
ccggtgaagctctactcagccttggattccaaggagaagatttcgttcaaccagattcac
gaaccttccaagcagcgcattcgctacgagaaggtcgcgccgggcattggcgccgtggac
aaagacgagatcgtcaaaggctacgaatatcaaaaaggccgctacgtgctcttcagcgat
gaagagttcgaagcgctgaaagtcgattccaagaagacgctcgacatggtgcagttcgcg
ccggccgacacgatagacccgatttatttcgacaaaccatattacgccctgcccgacggc
aaaatggcggacgagccctaccgggtcgtcagcgaagcgctgaagaagacgaagactgtg
ggcctcgggcaaataaccatgcgcggacgctcctacatcgcggcggtgaagccgtacgaa
ggcggcctcattgtcgaaacggttcactacgcggaagagcttcgcaaagcgaacttgttc
ttcgacgaaatcccaagcggcaagctcgacgccgatctggtcgatctcgcagaagagttg
atcacccgcaagaaggcgaagttcgaccccaacaagttcgaggacgaatacgcgatcgcg
atcgagcgactggtaaagaagaagattgagcgccacggcgaactgatcctggaagaccaa
gaagagccgtcccgggatcatggcgacaatgtcgtctcgctcgtggacgcgctgaaaaaa
tcgctggcgaagaagtccaagatcgtgggcgaagaagaagaagcgtccgcgccgaaacgg
cgcgctgcagcggaacgcaccaagacaacgcgcgctaaagctccggcgaagacgccggcg
aaaaagcgcgccaaaaaatga
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