KEGG   Candidatus Viadribacter manganicus: ATE48_12235
Entry
ATE48_12235       CDS       T04422                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
cbot  Candidatus Viadribacter manganicus
Pathway
cbot03030  DNA replication
cbot03410  Base excision repair
cbot03420  Nucleotide excision repair
cbot03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cbot00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ATE48_12235
   03410 Base excision repair
    ATE48_12235
   03420 Nucleotide excision repair
    ATE48_12235
   03440 Homologous recombination
    ATE48_12235
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cbot03032]
    ATE48_12235
   03400 DNA repair and recombination proteins [BR:cbot03400]
    ATE48_12235
Enzymes [BR:cbot01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ATE48_12235
DNA replication proteins [BR:cbot03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     ATE48_12235
DNA repair and recombination proteins [BR:cbot03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     ATE48_12235
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ATE48_12235
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 HHH_5 Sp-DndD HHH_2 DprA_N
Other DBs
NCBI-ProteinID: ANP46631
UniProt: A0A1B1AJA7
LinkDB
Position
2377807..2380692
AA seq 961 aa
MAKKDAPRLYLIDGSAYIFRAYHALPPLTRASDGLSVGAVAGFCNMLWKFLEEMKGAEAP
THLAVIFDKSEVTFRNKLYPEYKAHRPPAPEDLVPQFPMIRDATRAFNLPCIEMGGFEAD
DLIATYARQAAAGGASVRIVSSDKDLMQLIVEGVIQLYDPMKNRILGLDAVMEKFGVGPE
KVIDAQALIGDSTDNVPGAPGIGPKTAAELINTFGSLDAILERANEIKQQKRRETLINFA
DQIRLSRELVTLKDDVDVEEKWESFALREPDPAMLLQFIDAMEFRTLGRRVREHFAKEKG
VQIVASYTSAAPPLAPVHADDGAPRAGPVLEEIEREFKPDAYKIVRDLPALEDYIRRAKL
AGAIGIDTEADSFDAMRAQLVGVSLSLAANDAIYIPLQHRGSESRAGELFAAEAPSETGA
LDTGTQIGLSAALAALQSLFEDASVTKVGLNIKWDIALFAKHKIALKAFDDPMLASYTLY
GGLDDHDKTSLIEKHIGHGLTPYANVAGKGKAQQTFDLVPIEAAAAYSCEHADAALRLYR
KLSPELASNHLITVYETLERPLPPVLAAMEREGIKVDPQMLSRLSGDFAQRMLQYESEAY
GLAGKEFNLGSPKQLGEILFDELKLAGGGKTKTGAWSTDAAILEDLAEQHDLPAKVLEWR
QLSKLRSTYTEALGAAINPQTNRVHTSYALASTTTGRLSSNDPNLQNIPIRTEEGRRIRD
AFIAEKGNVLVSADYSQIELRLLAHVADIPQLKQAFADGVDIHARTASEMFGVPVEGMPK
EIRSNAKAINFGIIYGISAFGLARNLGIAREEAAAYIKKYFERFPGIRDYMEETKAFARA
NGYVKTIFGRRIWVKGIQSKNPSERAFGERQSINAPLQGAAADIIRRAMVRLPAALAKAK
LKSRMLLQVHDELVFEAPKEEADTLCKLAKDVMEAAPEPAAILSVPLTVEAKAGSSWGAA
H
NT seq 2886 nt   +upstreamnt  +downstreamnt
atggctaagaaagacgctccgcgcctctacctcatcgacggctccgcctacatcttccgt
gcgtatcacgcgttgccgccgctgacgcgtgcaagcgatggcctaagcgtaggcgccgta
gccggcttttgtaacatgctgtggaagttcttagaggagatgaaaggcgccgaagcgccg
actcacctcgcagttatcttcgacaaaagcgaagtgaccttccgcaacaagctctatccg
gaatacaaagcccatcgcccgccggcgccggaagatctggtgccgcagttcccgatgatc
cgggacgcgacgcgcgcgtttaatctgccgtgcatcgagatggggggcttcgaggccgac
gatctgatcgcgacgtatgcgcgccaagccgctgccggtggcgccagcgtgcgcatcgtc
tcgtccgacaaggacctcatgcaactcatcgttgaaggcgtcattcagctttatgacccg
atgaagaaccgcattctcggcctcgacgctgttatggagaagtttggcgtcggccccgag
aaggtgatcgacgcgcaagcgctcatcggcgattcgacggacaacgttccgggcgcacct
ggcatcggccccaagacagcagcagaactcatcaacacgttcggctcgctcgatgcgatc
cttgaacgcgccaacgagatcaagcagcagaagcggcgcgaaaccttgatcaacttcgcc
gatcagatccgtctctctcgcgaactcgtcacactcaaagacgatgtcgacgtcgaagag
aagtgggaaagcttcgcgctgcgtgagcccgatccagcgatgctgcttcaatttatcgac
gcgatggagttccgcacgcttgggcggcgtgtgcgtgagcactttgctaaagagaagggc
gttcagatcgtcgccagctacacctccgcggcgcctccgctggcgccggtgcatgcggat
gacggcgcgccgcgcgctggcccggtgcttgaagagatcgagcgtgagttcaagcccgac
gcttacaagatcgtccgcgatctgccagcgctggaggactatattcgccgcgccaagctc
gctggtgcaatcggtatcgatactgaagcagattcgttcgatgcgatgcgggcgcagctt
gtcggtgtctcgctttcacttgcggcgaatgacgcgatttacattccgctgcagcatcgc
ggttcggagtcgcgcgccggcgagttgttcgcggcagaggcgccgtccgagacgggggcc
ttggatacggggacgcaaatcggtttgagcgcagcgctcgccgcattgcagtcgttgttc
gaagacgcgtcggtcaccaaagtcggcctcaacatcaaatgggatattgcgctcttcgcc
aagcacaagatagcgctcaaggcgtttgatgatccaatgctggcgtcctacacgctttat
ggcggactagacgatcacgataagacttcgttgatcgaaaagcacattggccatggcttg
acgccgtacgccaacgtcgccggcaaaggcaaggcgcagcagactttcgatttagtgccg
atcgaagctgcggcggcatattcgtgcgaacacgctgacgctgctttgcggctttatcgt
aagctctcaccggaattggcgagcaatcaccttatcacggtatacgaaacacttgagcgg
cctttgccgcctgtgcttgcggcaatggagcgcgaagggatcaaggttgacccgcagatg
ctctcgcgcctttccggcgattttgcgcagcgcatgttgcaatatgaatccgaggcctac
gggcttgcaggaaaggaattcaatctcgggtcgcctaagcagctcggcgaaattttgttt
gatgagctcaagcttgcgggtggcggcaaaaccaagaccggcgcttggtccaccgatgcg
gcgatcctcgaagatttggctgagcagcacgatctgccagccaaggtgctcgagtggcgt
caactctcaaagctgcgctccacctacaccgaagcattgggcgcagccatcaatccgcag
accaatcgcgtacacaccagctacgcgctcgcctcaaccacaacggggcggctctcgtcg
aatgatccaaacctgcagaatattccgatccgcaccgaggaaggccgtcgcattcgcgat
gcgttcattgccgagaagggcaatgtgcttgtctcagccgactattcgcagatcgagctg
cgcctgctcgcgcatgtcgcggacattccccagctgaagcaggcatttgccgatggtgtc
gatattcatgctcgcaccgcgtcggagatgttcggcgttccggttgagggcatgccgaag
gaaattcgtagcaatgccaaggcgatcaatttcggcattatctacggcatcagcgcgttc
ggcttagcacgcaatctcggcatcgcccgtgaagaagcggccgcctacatcaagaaatac
tttgagcgctttccaggcatccgcgattacatggaagagaccaaagcgttcgctcgcgct
aacggctacgtgaaaacgatcttcggccgccgcatctgggtgaagggcatccagtcgaag
aatccgagcgaacgcgcgtttggcgaacgccaatccatcaatgcgccgctgcaaggcgcc
gccgccgacatcattcggcgtgcgatggttcgcttgccggcggcgttggcgaaggcaaag
ctaaagtcgcgcatgctgctgcaagtgcatgacgaactcgtgttcgaggcgccgaaggaa
gaagcggacacgctttgcaagcttgcaaaggacgtgatggaagccgcgcctgagcctgcg
gctattctcagcgtgcctctaacggtcgaagccaaagccggatcaagctggggcgctgcg
cactaa

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