Candidatus Viadribacter manganicus: ATE48_12420
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Entry
ATE48_12420 CDS
T04422
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
cbot
Candidatus Viadribacter manganicus
Brite
KEGG Orthology (KO) [BR:
cbot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbot03032
]
ATE48_12420
03036 Chromosome and associated proteins [BR:
cbot03036
]
ATE48_12420
03400 DNA repair and recombination proteins [BR:
cbot03400
]
ATE48_12420
DNA replication proteins [BR:
cbot03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ATE48_12420
Chromosome and associated proteins [BR:
cbot03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
ATE48_12420
DNA repair and recombination proteins [BR:
cbot03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
ATE48_12420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
Dpoe2NT
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
ANP48058
UniProt:
A0A1B1ANA5
LinkDB
All DBs
Position
complement(2418171..2418461)
Genome browser
AA seq
96 aa
AA seq
DB search
MLRSELVNRLQEEMAPLKAAEIEHAVDVVLDEIAVALAAGGRVELRGFGAFSVRKRDART
GRNPRTGATVKVSAKKVPFFKPGKELRLKVNGGEEP
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgctcggagctggtcaacagacttcaagaagagatggcgccgctcaaggccgcc
gagattgagcacgcggtggacgtggtgctggatgaaatcgccgtggcgctggcggcgggc
ggacgtgtggaactgcgcggcttcggcgcgttttcggtgcgaaagcgcgacgcgcgcaca
ggtcgcaatccgcgaacgggcgcgacggtcaaggtctcggccaagaaggtgccgttcttc
aagccgggcaaggagctgcggttgaaggtcaatggcggcgaggagccgtaa
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integrated database retrieval system
