Candidatus Viadribacter manganicus: ATE48_12905
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Entry
ATE48_12905 CDS
T04422
Name
(GenBank) hypothetical protein
KO
K24073
RNA polymerase sigma factor CnrH
Organism
cbot
Candidatus Viadribacter manganicus
Brite
KEGG Orthology (KO) [BR:
cbot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbot03021
]
ATE48_12905
Transcription machinery [BR:
cbot03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ATE48_12905
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
PhyR_sigma2
Motif
Other DBs
NCBI-ProteinID:
ANP46749
UniProt:
A0A1B1AJK1
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All DBs
Position
complement(2521267..2521824)
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AA seq
185 aa
AA seq
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MTTPDERDDAALVAAVLAGDERAFGQLMRKHKDSLYRFIRGYTGDAGEAYDLVQEAFVAA
WHALSRFDQRRSFGVWLKRIAINKCRDWRRRRAVRQFFYSAEDIHQPGFDVAAIEQAPTD
QDEDLARLDTAIAALPPNLKEPLLLSLTENLSHRAIGETLGITAKAVEVRIYRAKLAISQ
ALESK
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgacaacccccgacgagcgcgacgacgcagcgctcgtggcggccgtcctggccggcgat
gaacgggcgttcgggcaattgatgcggaaacacaaagatagcctctatcgcttcattcgt
ggctacaccggcgatgctggtgaagcctacgatctcgtgcaggaggctttcgtcgccgct
tggcacgcgctctcgcgcttcgatcaacgccgatccttcggcgtctggctaaagcgcatt
gccatcaacaagtgccgcgattggcgccgcagacgggccgtgcgccaattcttctatagt
gccgaagacattcaccagcccggctttgatgtggcggcgatcgaacaggcgccgaccgat
caagacgaagatctagcgcgcctcgacacggccatcgccgccttgccgccgaatctcaaa
gagccgctgctcctctcgctgaccgagaatctgtctcatcgcgccatcggcgaaaccctc
gggattaccgccaaggccgtagaagtgcgcatctaccgggccaagctcgccatcagccag
gcgcttgagagcaaataa
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