Corynebacterium bovis: CBOVI_01305
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Entry
CBOVI_01305 CDS
T09479
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cbov
Corynebacterium bovis
Brite
KEGG Orthology (KO) [BR:
cbov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbov03032
]
CBOVI_01305 (topA)
03400 DNA repair and recombination proteins [BR:
cbov03400
]
CBOVI_01305 (topA)
Enzymes [BR:
cbov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CBOVI_01305 (topA)
DNA replication proteins [BR:
cbov03032
]
Prokaryotic type
DNA Topoisomerases
CBOVI_01305 (topA)
DNA repair and recombination proteins [BR:
cbov03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CBOVI_01305 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
MacB_PCD
Motif
Other DBs
NCBI-ProteinID:
WJY76806
LinkDB
All DBs
Position
369538..372597
Genome browser
AA seq
1019 aa
AA seq
DB search
MASNGSSGVKRLVIVESATKARKIAPYLGPDYIVEASVGHIRDLPRGAADVPAKHKKEPW
ARLGVNVDDDFEPLYVVSPDKKKKVADLKAKLKQVDELYLATDPDREGEAIAWHLLQVLK
PTVPVRRMVFHEITKPAILAAAENTRELDHDLVDAQETRRVLDRLYGYEVSPVLWKKVMP
RLSAGRVQSVATRVIVERERERMAFIAADYWDLTAHLRLLDGAGVSGEGPREVDAKLARI
DGTRVAQGRDFTDRGEVRTKDVRVLDKTAATALADGLRGREMRVSAVEEKPYTRRPYPPF
MTSTLQQEAGRKLHFTSERTMRIAQRLYENGHITYMRTDSTTLSTSGINAARAQAAELYG
ERFVADAPRQYTRKVKNSQEAHEAIRPAGETFATPGQLSGRLDAEEFKLYELIWQRTVAS
QMADARGTSVKVTVTGQAGSGETCDFTASGRTITFPGFLKAYVETTRQADGRDVADNAER
HLPVLAEGDGLSAEEISADGHTTTPPARYTEASLVKKMEELGIGRPSTYASIIKTIQDRG
YVLPRGNALVPSWVAFAVVGLLEDNFGSLVDYDFTSSMEDELDDIAAGRENRSDWLRGFY
FGDAGASDATAETVARLGGLKALVGNNLEQIDARRVNSLHLFDDADGTPIYVRVGRYGAY
LERTKPVPAGAPEGTEPEVQRANLPESMTPDELDLETAEKLFATPQGGRELGRNPANGRM
IVVKEGRFGPYVTERVTEDEEAGATAEAERTVDAEWDADDAERAKEGKKPFNRTTKTAAA
KREKRVRQLVDETLKPATASLFSSMDTGTVGLDDALKLLSLPREVGVDPSDGEVITAQNG
RYGPYLKKGNDSRSLAKEEDIFTVTLDEARRIYAEPKRRGRQAAQPPLKQLGDNDVSGKP
MTVKDGRFGPYVTDGQTNASLRRGDNPETITDARANELLSERRAKEAEQGGGRGAGRATS
ARKATKKSTAKKTTAKKSTAKKSTKKTTKKTTAKKTATKSAAKKSAAKATSAATRSTTT
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcaacggcagctccggtgtgaagcgcctggtgatcgtcgagtccgcgacgaag
gcccgcaagatcgccccgtacctgggacccgactacatcgtcgaggcctcggtcgggcac
atcagggacctgccccggggggccgcggacgtgcctgccaagcacaagaaggaaccgtgg
gcgcgcctcggcgtcaacgtcgacgacgacttcgagccgctctacgtcgtgagccccgac
aagaagaagaaggtcgcggacctcaaggcgaagctcaagcaggtcgacgagctctacctc
gcgacggaccccgaccgtgagggggaggccatcgcctggcacctcctgcaggtcctcaag
ccgacggtccccgtgcgccgcatggtcttccacgagatcacgaagcccgcgatcctcgcc
gccgcggagaacacccgcgagctcgaccacgatctcgtcgacgcccaggagacccgccgt
gtcctcgaccgcctgtacggctacgaggtctcgccggtgctgtggaagaaggtcatgccc
cggctgtcggccggccgtgtccagtccgtcgcgacgcgcgtgatcgtcgagcgcgaacgt
gagcgcatggccttcatcgccgccgactactgggacctcaccgcccacctccggctgctc
gacggcgccggggtgtccggcgagggcccccgggaggtcgacgcgaagctcgcgaggatc
gacggcacccgcgtcgcccagggccgggacttcacggaccgcggcgaggtgcgcacgaag
gacgtgcgggtcctcgacaagaccgccgcgacggccctcgcggacgggctgcgcggccgc
gagatgcgggtcagcgcggtggaggagaagccgtacacccggcgcccctacccgccgttc
atgacctccacgctccagcaggaggccgggcggaagctgcacttcacgtcggagcggacg
atgcgcatcgcgcagcggctctacgagaacggccacatcacgtacatgcgtacggactcc
acgacactgtccacgtccggcatcaacgcagcgcgggcgcaggccgccgaactgtacggt
gagcgtttcgtcgcggacgccccgcgccagtacacccgcaaggtgaagaactcccaggag
gcccacgaggcgatccgcccggcgggcgagacgttcgccaccccgggccagctgtcgggc
cggctcgacgccgaggagttcaagctctacgagctcatctggcagcgcacggtcgcctcc
cagatggccgacgcgcgcggcacgtcggtcaaggtcaccgtcaccggccaggccggcagc
ggcgagacctgcgacttcacggcctccgggcgcacgatcacgttccccggcttcctcaag
gcgtacgtcgagacgacgcgacaggccgacggccgggacgtcgcggacaacgcggagcgt
cacctgccggtcctcgccgagggcgacggcctgtccgccgaggagatcagcgccgacggg
cacacgacgacccctccggcccgctacaccgaggccagcctcgtcaagaagatggaggag
ctcggcatcggccgcccgtcgacgtacgcgtcgatcatcaagacgatccaggaccggggg
tacgtcctcccgcgcgggaacgcgctggtcccgtcgtgggtcgcgttcgccgtcgtcggc
ctcctggaggacaacttcgggtcgctcgtcgactacgacttcacgtcgtcgatggaggat
gagctcgacgacatcgccgccggccgggagaaccggtcggactggctccggggcttctac
ttcggggacgcgggtgcctccgacgcgaccgcggagacggtggcccggctgggtggcctc
aaggctctcgtcgggaacaacctggagcagatcgacgcgcggcgggtgaactccctgcac
ctcttcgacgacgccgacgggaccccgatctacgtgcgcgtcggccggtacggggcgtac
ctcgaacggacgaagccggttccggcgggcgcgcccgagggcacggagccggaggtccag
cgggcgaacctgcccgagtcgatgaccccggacgagctcgacctcgagacggcggagaag
ctcttcgccaccccgcagggtgggcgtgagctgggccggaacccggcgaacggccgcatg
atcgtcgtcaaggagggccggttcgggccgtacgtcaccgagcgggtcaccgaggacgag
gaggccggcgcgaccgcggaggcggagcgcaccgtcgacgccgagtgggacgccgacgac
gcggagcgggcgaaggaggggaagaagcccttcaaccggaccacgaagaccgcggcggcg
aagcgggagaagcgtgtccgccagctcgtcgacgagacgctcaagccggcgaccgcctcc
ctgttctcgagcatggacacgggcacggtgggtctcgacgacgcgctgaagctgctgagc
ctcccccgggaggtgggcgtcgacccgtcggacggggaggtcatcaccgcccagaacggc
cgctacggtccgtacctcaagaagggcaacgactcccgctccctggcgaaggaggaggac
atcttcaccgtcaccctcgacgaggcgcggcggatctacgccgagccgaagcgccggggg
cggcaggcggcgcagccgccgttgaagcagctcggggacaacgacgtctccgggaagccg
atgacggtcaaggacgggcggttcggcccgtacgtcaccgacgggcagacgaacgcctcc
ctgcgccggggcgacaacccggagacgatcaccgacgcgcgtgcgaacgagctgctctcc
gagcggcgcgcgaaggaggccgagcagggtggcggccggggcgccgggagggcgacgtcg
gcccggaaggcgacgaagaagtccaccgcgaagaagaccacggcgaagaagtcgacggcg
aagaagtcgacgaagaagaccaccaagaagaccacggcgaagaagaccgccacgaagtcc
gcggcgaagaagtccgccgcgaaggcgacgtccgcggccacgcggtccacgacgacgtag
DBGET
integrated database retrieval system
