Corynebacterium bovis: CBOVI_01780
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Entry
CBOVI_01780 CDS
T09479
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cbov
Corynebacterium bovis
Pathway
cbov03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cbov00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CBOVI_01780 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbov03021
]
CBOVI_01780 (rpoC)
03400 DNA repair and recombination proteins [BR:
cbov03400
]
CBOVI_01780 (rpoC)
Enzymes [BR:
cbov01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CBOVI_01780 (rpoC)
Transcription machinery [BR:
cbov03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CBOVI_01780 (rpoC)
DNA repair and recombination proteins [BR:
cbov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CBOVI_01780 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Glyco_tranf_2_4
Motif
Other DBs
NCBI-ProteinID:
WJY76896
LinkDB
All DBs
Position
480456..484427
Genome browser
AA seq
1323 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAANIITSVDEEGRHNDQSTLEAEMLLEKKEVEADRDSELQERSEKLEAD
LAELEAAGAKADAKRKVQTAAEREMRHIRERAEREVDRLDEIWSTFVKLAPKQMIADENI
YTELVDRYEDYFTGGMGAEAIQTLIRSFDLEAEAESLRETIRDGKGQKKLRALKRLKVVA
AFLRSGNDPAGMVLDCIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMLDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHQCGLPKLMALELFKPFVMKRLVEKSYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVMLNRAPTLHRLGIQAFEPILVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLASNNILSPASGKPLAMPRLDMVTGLYYLTLVKKETEFGGQ
GAYSPATDERPATGVYSSLAEAIMAYDRGVLGLQAPIRVRISHLRPPADVEADHFPDGWQ
RGETWLAETTLGRVLFNELLPWNYPYVEGVMAKKPQAAVINDLAAKYPMITVAQTVDKLK
DAGFYWATRSGVTITMHDVLVLPNKAEILDRYEERARVIEKKMARGKINETERYNSLVDL
WKEATDLVGESVEELYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVTNSKGEYITRPIK
TSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREDDCGTRRGV
TLPLATPVLDAEGQETGEFRRAEFVETSVTGRFLADDATAPDGTVIIEAGNDLGDSDIDR
LVAAGVREVKVRSVMTCETATGVCATCYGRSMATGKKVDIGEAVGIVAAQSIGEPGTQLT
MRTFHQGGVGGDITGGLPRVQELFEARVPKARAPIASVDGTVRIDDGENFFTVTIVPDDG
SDDVVYEKLSKRQGLAVVKNDGGYERQMRDGDHVTMGQQLLKGAADPHEVLRVLGRRGVQ
LHLINEVQKVYRDQGVAIHDKHIEIIVRQMLRRVTVIDSGSTEFLPGSLVEHADAVAASK
EAVQSGGRPVEVRAEIMGITKASLATESWLSAASFQETTRVLTDAAINKRSDKLIGLKEN
VIIGKLIPAGTGIARYRNISVEPTEEARAAAYSIPSTFGDGFYGDDSYGEFTGAAVPLDD
LDM
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacgtcaacttcttcgacgagcttcgcatcggtctggcgacggccgacgacatc
cgccgctggtccaagggcgaggtgaagaagcccgagaccatcaactaccgcaccctcaag
cccgagaaggacggtctgttctgcgagcgcatcttcggcccgacccgggactgggagtgc
gcctgcggcaagtacaagcgggtccgctacaagggcatcatctgtgagcgctgcggcgtc
gaggtgacgaagtcgaaggtccgccgcgagcggatgggccacatcgagctcgccgccccg
gtgacgcacatctggtacttcaagggtgtgccctcgcggctcggttacctgctcgacctc
gccccgaaggatctcgagaagatcatctacttcgcggcgaacatcatcacgtccgtcgac
gaggagggccggcacaacgaccagtccaccctcgaggcggagatgctgctggagaagaag
gaggtcgaggccgaccgcgactcagagctccaggagcgttccgagaagctcgaggccgac
ctcgccgagctcgaggccgccggcgcgaaggccgacgcgaagcggaaggtgcagaccgcc
gccgagcgcgagatgcgccacatccgcgagcgcgccgagcgcgaggtggaccggctcgac
gagatctggagcacgttcgtcaagctcgccccgaagcagatgatcgccgacgagaacatc
tacaccgagctcgtcgaccgctacgaggactacttcacgggcggcatgggcgccgaggcg
atccagacgctcatccgcagcttcgacctcgaggccgaggccgagagcctccgcgagacg
atccgcgacggcaaggggcagaagaagctccgcgccctcaagcggctcaaggtcgtcgcg
gcgttcctccggtccggcaacgacccggccggcatggtcctcgactgcatcccggtcatc
ccgccggagctgcggccgatggtccagctcgacggcggccgtttcgcgacgtccgacctc
aacgacctgtaccgccgcgtcatcaaccggaacaaccggctcaagcgcatgctcgacctc
ggcgcgcccgagatcatcgtgaacaacgagaagcgcatgctccaggagtccgtcgacgcg
ctgttcgacaacggccggcgtggccgccccgtcacggggccgggcaaccgtccgctgaag
tccctgtccgacctgctcaagggcaagcagggccgcttccgtcagaacctgctcggtaag
cgcgtggactactccgggcgttccgtcatcatcgtcggtccgcagctcaagctgcaccag
tgcggcctgccgaagctcatggccctcgagctgttcaagccgttcgtcatgaagcggctc
gtcgagaagagctacgcgcagaacatcaagtccgccaagcggatggtcgagcggcagcgc
cccgaggtctgggacgtgctcgaggaggccatctccgagcacccggtcatgctcaaccgt
gcgcccaccctgcaccggctgggcatccaggcgttcgagccgatcctcgtcgagggcaag
gccatccagctccacccgctggcctgcgaggcgttcaacgccgacttcgacggtgaccag
atggccgtccacctgccgctgtcggcggaggcccaggccgaggcccggatcctcatgctc
gcgtcgaacaacatcctctccccggcgtccggtaagccgctggccatgccccgtctggac
atggtcacgggcctgtactacctcacgctcgtgaagaaggagaccgagttcggcggccag
ggcgcgtacagcccggcgaccgacgagcgccccgcgaccggcgtgtactcctcgctggcc
gaggcgatcatggcgtacgaccgtggggtcctcgggctccaggcgccgatccgcgtgcgg
atcagccacctgcgcccgccggccgacgtcgaggcggatcacttccccgacggctggcag
cgcggtgagacctggctcgccgagacgaccctcggccgggtgctcttcaacgagctcctg
ccgtggaactacccgtacgtcgagggcgtcatggcgaagaagccgcaggcggcggtcatc
aacgacctcgcggcgaagtaccccatgatcacggtcgcgcagaccgtggacaagctcaag
gacgccggcttctactgggccacccgctccggtgtgacgatcaccatgcacgacgtgctc
gtcctgccgaacaaggccgagatcctcgaccggtacgaggagcgggcccgggtcatcgag
aagaagatggcgcgcggcaagatcaacgagacggagcgctacaactcgctggtcgacctg
tggaaggaggccaccgacctcgtcggtgagtccgtcgaggagctctacccggacgacaac
ccgatcccgatgatcgtgaagtcgggcgcggcgggcaacatgcgtcagatctggacgctc
gccggcatgaagggcatggtcacgaactcgaagggtgagtacatcacccgtccgatcaag
acctccttccgcgagggcctctccgtgctcgagtacttcaacaactcccacggttcccgc
aagggcctcgccgacaccgccctccgtaccgccgactcgggctacctcacccgtcgtctc
gtcgacgtcgcgcaggacgtcatcgtccgcgaggacgactgcggcacccgccgtggcgtc
accctgccgctcgcgaccccggtgctcgacgccgagggtcaggagacgggcgagttccgc
cgcgcggagttcgtcgagacctccgtcaccggccggttcctcgccgacgacgcgacggcc
cccgacggcaccgtcatcatcgaggccggcaacgacctcggtgattcggacatcgaccgc
ctcgtcgcggccggcgtgcgggaggtcaaggtccgctccgtcatgacgtgcgagaccgcg
accggcgtgtgcgcgacgtgctacggccgctccatggcgaccggcaagaaggtcgacatc
ggtgaggccgtgggcatcgtcgccgcgcagtccatcggtgagcccggcacgcagctgacc
atgcgtacgttccaccagggtggtgtcggtggcgacatcaccggtggtctcccgcgtgtc
caggagctgttcgaggcccgcgtgccgaaggcccgcgccccgatcgcctccgtcgacggc
acggtgaggatcgacgacggcgagaacttcttcaccgtcacgatcgttcccgacgacggc
tccgacgacgtcgtctacgagaagctgtcgaagcgccagggcctggccgtcgtgaagaac
gacggcggctacgagcgccagatgcgcgacggcgaccacgtgacgatgggccagcagctc
ctcaagggtgccgccgacccgcacgaggtgctccgcgtcctcggccgccgtggtgtccag
ctccacctcatcaacgaggtgcagaaggtctaccgcgaccagggtgtggccatccacgac
aagcacatcgagatcatcgtccggcagatgctgcgccgcgtgacggtcatcgactccggg
tcgaccgagttcctcccgggctcgctcgtcgagcacgccgacgccgtcgcggcctcgaag
gaggccgtgcagagcggcgggcgtccggtcgaggtgcgtgccgagatcatgggcatcacc
aaggcctcgctggccaccgagtcctggctctccgccgcctccttccaggagacgacgcgc
gtgctcaccgacgcggcgatcaacaagcgctccgacaagctcatcgggctcaaggagaac
gtcatcatcggtaagctcatcccggccggcacgggcatcgcccgctaccggaacatctcg
gtcgagccgaccgaggaggcccgggccgccgcgtactccatcccgtcgacgttcggcgac
ggcttctacggtgacgactcctacggggagttcaccggcgcggccgtcccgctcgacgac
ctggacatgtag
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integrated database retrieval system
