Corynebacterium bovis: CBOVI_02890
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Entry
CBOVI_02890 CDS
T09479
Symbol
uvrD1
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cbov
Corynebacterium bovis
Pathway
cbov03420
Nucleotide excision repair
cbov03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CBOVI_02890 (uvrD1)
03430 Mismatch repair
CBOVI_02890 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbov03400
]
CBOVI_02890 (uvrD1)
Enzymes [BR:
cbov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CBOVI_02890 (uvrD1)
DNA repair and recombination proteins [BR:
cbov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CBOVI_02890 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
CBOVI_02890 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WJY77116
LinkDB
All DBs
Position
740024..743770
Genome browser
AA seq
1248 aa
AA seq
DB search
MSTTTPGPTVSPVDLSQRILNQKHPPTSQQAEVIGAPAGPALVVAGAGAGKTETMAARVV
WLVANGLVLPEQVLGLTFTRKAASELGRRIRDRLESLAQSSFIRDLPESDPRRTALEAVT
PTVATYDSYAGDIVREYGLLYPMEPAGRIITDTERWMIARDVVLGWDGPSAKDHGVGHLI
STMLELNDDMDNHLCSIDDVREETRAAIANAGSLPEREGKEGRKGVAGEVGKFIEAQQQR
LDLLPLVATFRQRMDELNVMTFGQQMSRAAELVDRHAEIGVAHRRRFRVVMLDEYQDTGH
TQRVMLRRLFGGGVDPDLTVTAVGDPMQSIYGFRGATASNLSTFRTDFPVGDEPAPKLQL
TTSWRNPPRVLDLANAVSDWSLEWNREDDTNRPVRRLTAGRDIPGEDVRVAWFDRRDREV
DWVADQLAAEYREFSDDLATPGHGRDRQFTAAVLVRRNADALPIHDALVARGVPVEMTAG
PGLLDVPEVADVYATLRVLVDPDDDIALLRLLTGVRWSIGARDLAALSARARQLSRARTR
AEPAGDADGADGTGVDGTGTDVGGAGGTDDDTAATVARLCADAPAVLAERLHEIMRSRDI
VTVGLADALADLRGIEDLGCSDTGRRRLAELAAELGQLRRHSLGKPLPDLVADIEQMTGV
RTEVLTRHHRDARASVGTSHLDRFADVVRSFADLSDASPAALVDYLRAAHREEKGLEPGE
VQTQPNCVQILTVHKAKGLEWDIVAVPHASRDTYGDAVKRPTVQPWTTTPQVIPSDLRGD
RATGPDDMTGAPVFDAAAVADTTDHVEESEDFRRRVGVHAAKEDDRLFYVAVTRSARMLL
VSGSAVKRTDLTGDDLTSRNTVDPSVGLMLSRARLQGVPGAVAHWSPLGALAKATAPSAR
EREELAASREQHLFALTPEEEGARLDAAAAHTAQESADGTAVWPRRPVTETRPGVADGVR
RVRAAQAAQVAARAQAADTADGEARSAGTGTGTGTSTGTADAGTLAELWERETELLVEEV
EAAAQPHVAVPLGTRLTATEAVAVQKDRAEFARRRRRPVPLEPKPYAKRGTAFHTWVEQR
YGMVSLLDTDDLPGASDATLGDPALERLKQAFLESPWAHRQPQTVEGDYSVTLAGHVVEG
RIDAVFHEGDDPAAGWFVVDWKTGRKPTGADMEAATVQLGVYRLAWARVLSRRLGREVPP
ENVRAAFHYVLSNETYEPGTLPSAETLAALWGGATAVGEQEQREGPTS
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccaccacccccgggccgaccgtgagccccgtcgacctgtcccagcggatcctc
aaccagaagcacccgcccacgtcgcagcaggccgaggtcatcggcgcccccgccgggccc
gcgctcgtcgtcgccggcgccggcgccgggaagacggagacgatggccgcgcgcgtcgtc
tggctcgtcgccaacgggctcgtgctgcccgagcaggtcctcgggctgaccttcacgaga
aaggccgcgagcgaactcggccgccgcatccgcgaccggctcgaatccctcgcgcagagc
agcttcatccgcgacctgccggagtccgacccccgccgcaccgccctcgaggccgtgacc
ccgaccgtcgcgacgtacgactcgtacgccggggacatcgtccgggagtacgggctgctc
taccccatggaacccgccgggcggatcatcaccgacaccgaacggtggatgatcgcccgc
gacgtcgtcctcggctgggacgggccgtcggcgaaggaccacggcgtcgggcatctcatc
tcgacgatgctcgagctcaacgacgacatggacaaccacctgtgcagcatcgacgacgtg
cgggaggagacccgcgcggccatcgccaacgccgggagcctgcccgaacgggagggcaag
gaggggcgcaagggcgtcgccggggaggtcgggaagttcatcgaggcccagcagcagcgc
ctcgacctcctcccgctcgtcgccaccttccggcagcgcatggacgagctcaacgtcatg
acgttcggccagcagatgtcccgcgccgccgaactcgtcgaccggcacgcggagatcggc
gtcgcccaccgccgccggttccgcgtcgtcatgctcgacgagtaccaggacaccgggcac
acccagcgcgtcatgctccgccggctgttcgggggaggggtcgaccccgacctcaccgtc
accgccgtcggcgaccccatgcagtccatctacggcttccgcggggcgacggcgtcgaac
ctctccaccttccgcaccgacttcccggtgggcgacgaacccgccccgaaactccagctc
accacctcctggcgcaacccgccgcgcgtgctcgacctcgccaacgcggtctccgactgg
tccctcgagtggaaccgggaggacgacacgaaccgtcccgtccgccggctcaccgccggg
cgggacatccccggcgaggacgtgcgcgtcgcatggttcgaccggcgtgaccgggaggtc
gactgggtggccgaccagctcgccgccgagtaccgggagttcagcgacgacctcgccacc
cccgggcacggccgcgaccggcagttcaccgccgccgtcctcgtgcgccggaacgccgac
gcgctgccgatccacgacgccctcgtcgcccgcggggtcccggtggagatgaccgccggg
cccgggctcctcgacgtgcccgaggtcgcggacgtgtacgccacgctgcgggtgctcgtc
gaccccgacgacgacatcgccctgctccggctcctcaccggcgtgcgctggtcgatcggc
gcgcgggacctcgccgcgctgtccgcgcgggcgcggcagctcagccgggcccggacccgc
gcggagcccgccggcgacgcggacggggcggacgggaccggtgtcgacgggaccggcacg
gacgtgggcggcgccggggggaccgacgacgacaccgccgcgaccgtcgcccgcctctgc
gccgacgcgcccgcggtgctcgccgagcggctccacgagatcatgcgcagccgcgacatc
gtcaccgtggggctcgccgacgccctcgccgacctgcgcggcatcgaggacctggggtgc
agcgacaccggccggcggcggctcgcggaactcgccgccgagctcggccagctgcgccgg
cacagcctcggcaagccgctgcccgacctcgtcgccgacatcgagcagatgaccggcgtc
cgcaccgaggtgctcacccggcaccaccgggacgcccgggcgtcggtcgggaccagccac
ctcgaccgcttcgcggacgtcgtccggtccttcgccgacctcagcgacgccagccccgcc
gcactcgtcgactacctgcgcgccgcgcaccgggaggagaagggactcgaacccggcgag
gtgcagacccagcccaactgcgtgcagatcctcaccgtgcacaaggccaagggccttgaa
tgggacatcgtcgcggtgccccacgcctcccgggacacgtacggcgacgccgtgaaacgc
ccgaccgtccagccgtggacgacaaccccgcaggtcattccctccgacctgcgcggggac
cgggcgaccgggccggacgacatgaccggggcccccgtgttcgacgccgcggccgtcgcc
gacacgaccgaccacgtcgaggagtccgaggacttccgccgccgcgtcggcgtccacgcg
gcgaaggaggacgaccggctgttctacgtcgccgtcacccggtccgcccggatgctgctc
gtcagcgggtccgccgtgaagcgcaccgacctcaccggtgacgacctgacgtcgcggaac
accgtcgacccgtccgtcgggctgatgctcagccgggcgcggctgcagggcgtgccgggt
gccgtcgcccactggtcgccgctcggggcgctggccaaggccaccgccccgagcgcccgg
gagcgggaggagctggcggcctcccgcgagcagcacctcttcgccctgaccccggaggag
gagggggcgcgcctcgacgccgccgccgcgcacaccgcgcaggagagcgccgacggcact
gccgtgtggccgcggcgcccggtcaccgagacccggccgggcgtcgccgacggtgtccgg
cgggtccgggccgcgcaggccgcgcaggtcgcggcccgagcgcaggcggcggacaccgcg
gacggtgaggcgcgcagtgccggcacaggcacaggcaccggcacgtccacgggcaccgcg
gacgccggcaccctcgctgagctgtgggaacgggagaccgagctgctcgtcgaggaggtg
gaggccgcggctcagccccacgtcgccgtcccgctcggcacccggctcaccgccaccgag
gccgtcgccgtgcagaaggaccgggcggagttcgcccgccgccgacgccgccccgtgccc
ctcgagccgaagccgtacgccaagcgcggcaccgccttccacacctgggtggagcagcgg
tacggcatggtcagcctcctcgacaccgacgacctccccggcgcctcggacgcgaccctc
ggggacccggcgctcgaacggctcaagcaggccttcctcgagtcgccgtgggcacaccgc
cagccgcagaccgtcgagggggactactcggtcaccctcgccgggcacgtcgtcgagggg
aggatcgacgccgtcttccacgagggcgacgacccggccgccgggtggttcgtcgtcgac
tggaagacgggccgcaagcccacgggtgcggacatggaggccgcgacggtgcagctcggc
gtgtaccgactcgcgtgggcgcgggtcctcagccgccggctcggccgggaggtcccgccg
gagaacgtccgtgcggccttccactacgtgctgtcgaacgagacatacgaaccgggtaca
ctgccgtcagcagagacactcgccgccctgtggggcggtgcgaccgcggtgggagagcag
gagcagcgtgagggaccgacttcgtga
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