Corynebacterium bovis: CBOVI_04675
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Entry
CBOVI_04675 CDS
T09479
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cbov
Corynebacterium bovis
Brite
KEGG Orthology (KO) [BR:
cbov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbov03016
]
CBOVI_04675 (truB)
Enzymes [BR:
cbov01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CBOVI_04675 (truB)
Transfer RNA biogenesis [BR:
cbov03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CBOVI_04675 (truB)
Prokaryotic type
CBOVI_04675 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
WJY77463
LinkDB
All DBs
Position
complement(1184723..1185793)
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AA seq
356 aa
AA seq
DB search
MTDRPSGPSSAPRPDAGPARPDAARPAGSVLERSGLVIVDKPAGMTSHDVVSRLRRLFRT
KRVGHAGTLDPDATGVLVVGVERGTKFLAHLVSDDKRYTADIAFGTTTVTDDAAGEVLTR
ATPEALAAVTEDRIRTAFSHQVGEIMQRPSSVSSVKVDGRRAHELVREGREVTLPARPVT
VHALDVTAVADGAAAPVPTASVAVHCSSGTFIRAIARDVGEELGVGGHVTALRRTAVGPF
GIDGARTLDALEAEVRAGEDSAADGSGPADDAAPAGGAAPVPALSLTLDEAVVRSFPVRE
ISDAEGADLALGKWLHPVGMRGVYAAVTPSGRAVALVRERGDRAASVFVARPHGLS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccgcccctcaggcccctcctccgccccccgcccggacgccggaccggcccga
cccgacgcggcccgcccggcggggtccgtcctcgagcgctccggcctcgtcatcgtcgac
aaaccggcggggatgacgagtcacgacgtcgtctcccgcctgcgacgactcttccggacg
aagcgggtgggccacgccggcaccctcgacccggacgccacgggcgtgctcgtcgtcggc
gtcgaacggggcacgaagttcctcgcccacctcgtcagcgacgacaagcgctacaccgcc
gacatcgcgttcggcacgaccacggtcaccgacgacgccgcgggtgaggtcctcacccgg
gcgaccccggaggcgctcgccgcggtgacggaggaccgcatccgcaccgcgttctcccac
caggtcggcgagatcatgcagcggcccagcagcgtgtcctcggtgaaggtcgacggccgc
cgcgcccacgagctcgtccgcgagggccgggaggtcacgctccccgcccggccggtgacc
gtccacgccctcgacgtcaccgcggtcgccgacggggccgccgcgccggtgccgacggcg
tcggtggcggtccactgctcctcggggacattcatccgcgcgatcgcccgcgacgtcggc
gaggagctcggggtcggcgggcacgtgaccgcgctgcgccgcacggccgtcggcccgttc
gggatcgacggggcccgcaccctcgacgcgctcgaggcggaggtccgcgccggggaggac
agcgccgccgacgggtccggccccgcggacgacgccgccccggccgggggcgcggccccg
gtgcccgccctgtcgctgaccctggacgaggcggtggtccggtccttccccgtccgtgag
atctccgacgcggagggggcggacctcgccctcggcaagtggctgcacccggtcgggatg
cgcggggtgtacgcggccgtcaccccgtccggccgggccgtcgcgctggtccgggagcgg
ggcgaccgcgcggcgagcgtgttcgtcgcccgcccgcacggcctgtcctga
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