Corynebacterium bovis: CBOVI_04820
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Entry
CBOVI_04820 CDS
T09479
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
cbov
Corynebacterium bovis
Pathway
cbov00300
Lysine biosynthesis
cbov00470
D-Amino acid metabolism
cbov01100
Metabolic pathways
cbov01110
Biosynthesis of secondary metabolites
cbov01120
Microbial metabolism in diverse environments
cbov01230
Biosynthesis of amino acids
Module
cbov_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cbov00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CBOVI_04820 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CBOVI_04820 (dapF)
Enzymes [BR:
cbov01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CBOVI_04820 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
WJY77492
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Position
1217198..1218178
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AA seq
326 aa
AA seq
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MTDAHTSTAPTPDPRRGSPAGSADRTDTALTVVKAHGTGNDFVVVPDPDVLVDVTPELVR
GLCDRHRGVGGDGLIRVATCGALVRAGVLDAVPDGLDDNSWFMDYRNADGSTAEMCGNGV
RVFGHVLHARGLLGDAGPGGTEVTVGTRAGARTLRVHSADDVSADVSVDMGVPAVTGVST
CTVGDRDIAGLAVDMGNPHLAAVVPGLTAGDLADLPLDRGVTHDEAFFPDGVNVEVVTAL
ADGAVRMRVHERGVGETLSCGTGTVAAAVAALADAGDGTGTVDVHVPGGVVSVTVEGNDE
GITGSTLRGPSRIVFATTVDPAVLAG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgcgcacacctccaccgccccgacgccggacccccgccgggggtcccccgcg
gggtccgccgaccgcaccgacaccgcgttgaccgtcgtcaaggcgcacggcaccgggaac
gacttcgtcgtcgtccccgaccccgacgtcctggtcgacgtgaccccggagctggtccgt
gggttgtgcgaccggcaccgtggcgtcgggggcgacgggctcatccgcgtcgcgacgtgc
ggggccctcgtccgggccggggtgctcgacgccgtgcccgacgggctcgacgacaactcc
tggttcatggactaccggaacgcggacggcagcacggccgagatgtgcggcaacggtgtg
cgcgtcttcggccacgtcctccacgcccgcggcctcctcggcgacgccggtcccgggggc
acggaggtgaccgtcggcacgcgcgcgggggcgcggaccctgcgggtgcactccgcggac
gacgtgtccgccgacgtctcggtcgacatgggggtgcccgcggtgaccggcgtctcgacg
tgcaccgtgggggaccgtgacatcgcgggcctggccgtcgacatgggtaacccccacctc
gcagcggtggtcccgggcctcaccgcgggggacctcgcggacctgcccctcgaccgtggt
gtgacccacgacgaggcgttcttccccgacggggtgaatgtggaggtcgtcaccgccctc
gccgacggggccgtgcggatgcgcgtccatgaacggggggtcggggagacgctctcgtgc
gggacggggacggtcgcggcggcggtcgccgcactcgccgacgccggggatgggacgggg
acggtcgacgtccacgtgcccggcggcgtcgtctcggtcacggtcgaggggaacgacgag
gggatcaccgggtcgacgctgcggggaccgtcgcgcatcgtcttcgccacgaccgtcgac
cccgcggtcctggccgggtga
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