Corynebacterium bovis: CBOVI_08340
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Entry
CBOVI_08340 CDS
T09479
Name
(GenBank) Type III restriction enzyme, res subunit
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
cbov
Corynebacterium bovis
Pathway
cbov03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cbov00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CBOVI_08340
09124 Replication and repair
03420 Nucleotide excision repair
CBOVI_08340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbov03021
]
CBOVI_08340
03400 DNA repair and recombination proteins [BR:
cbov03400
]
CBOVI_08340
Enzymes [BR:
cbov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CBOVI_08340
Transcription machinery [BR:
cbov03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CBOVI_08340
DNA repair and recombination proteins [BR:
cbov03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CBOVI_08340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_3
ERCC3_RAD25_C
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WJY78166
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All DBs
Position
2035103..2036764
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AA seq
553 aa
AA seq
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MNLGTGPLIVQSDKTVLLEIDHDLAQEARTALAPFAELERAPEHVHTYRITPLALWNARA
AGHDAEQVVDALERYSRFPVPQPLLIDIAETMDRYGRLTLVRDPAHGLVLQSRDPAVLAE
VRRHRRIRPMLGADLDGDSVVVHPSERGRLKQELLKVGWPAEDLAGYVDGEAHPIALSTE
TEDWQLRDYQQMAADSFWDGGSGVVVLPCGAGKTMVGAAAMARSRTTTLILVTNTVAGRQ
WRDELLRRTTLTEEEIGEYSGERKEIRPVTIATYQVVTRRTKGEFRSLELFDSRDWGLII
YDEVHLLPAPVFRMTSDLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQG
WIAPAECTEVRVSLTDAERMVYATAEPADRYRLAATSATKTRTVRRLLARHPGEPTLIIG
AYVDQLEELGAELDAPVIDGRTSTTRREALYAAFRAGEVRVLVVSKVANFSVDLPGASVA
IQVSGTFGSRQEEAQRLGRLLRPKPDGGAAHFYSVVARDTLDSEYAAHRQRFLAEQGYGY
RIIDSTDLDEETA
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
gtgaatctcggcaccggcccgctcatcgtccagtcggacaagaccgtcctgctggagatc
gaccacgatctcgcgcaggaggcccgcaccgcgctcgccccgttcgcggaactcgaacgg
gccccggagcacgtccacacctaccggatcaccccgctggcgttgtggaacgcccgcgcg
gccggccatgacgcggagcaggtcgtcgacgccctcgagcgctactcccgcttccccgtc
ccccagccgctgctcatcgacatcgcggagacgatggaccggtacggccggctgaccctc
gtgcgggacccggcccacggcctcgtcctccagagccgggacccggcggtgctcgcggag
gtccggcggcaccgccgcatccggccgatgctcggggcggacctcgacggcgactcggtc
gtcgtccacccctcggagcgtggccggctcaagcaggagctgctcaaggtcggctggccg
gccgaggacctcgccggctacgtcgacggcgaggcgcaccccatcgccctgtcgaccgag
acggaggactggcagctgcgggactaccagcagatggcggccgactcgttctgggacggc
ggctcgggcgtcgtcgtcctgccctgcggggcgggcaagacgatggtcggcgccgcggcg
atggcccgcagccggacgacgacgctcatcctcgtgacgaacaccgtcgccggccggcag
tggcgcgacgagctgctgcgccgcacgaccctcaccgaggaggagatcggcgagtactcc
ggggaacgcaaggagatccgcccggtgaccatcgccacgtaccaggtcgtcacgcgccgc
acgaagggcgagttccggtcgctggagctgttcgactcccgggactgggggctcatcatc
tacgacgaggtccacctgctgcccgcccccgtgttccgcatgacctcggacctccagtcg
cgccgccgcctcggcctcaccgcgacgctcgtccgggaggacggccgggagggcgacgtg
ttctccctcatcggcccgaagcggtacgacgcgccgtggaaggacatcgaggcccagggg
tggatcgccccggcggagtgcaccgaggtccgcgtgagcctcaccgacgccgagcggatg
gtctacgccacggcggagcccgcggaccggtaccggctcgcggcgacgtcggcgacgaag
acccgcacggtccgccgcctcctcgcccgtcacccgggggagccgacgctcatcatcggc
gcgtacgtcgaccagctcgaggagctcggcgcggagctggacgcccccgtcatcgacggc
aggacgagcacgacgcggcgcgaggcgctctacgccgccttccgggccggggaggtgcgg
gtgctcgtcgtgagcaaggtcgcgaacttctccgtggacctgcccggcgcgtccgtggcg
atccaggtgtccggcacgttcggctcgcggcaggaggaggcgcagcggctcgggcggctg
ttgcgcccgaagccggacgggggcgcggcccacttctactccgtcgtcgcccgtgacaca
ctggacagcgagtacgccgcccaccgtcagcgtttcctcgccgagcaggggtacggctac
cgcatcatcgactccaccgacctcgacgaggagaccgcgtga
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integrated database retrieval system
