Ciconia boyciana (Oriental stork): 140644533
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Entry
140644533 CDS
T10948
Symbol
COL2A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(II) chain
KO
K19719
collagen type II alpha
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy04510
Focal adhesion
cboy04512
ECM-receptor interaction
cboy04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
140644533 (COL2A1)
04518 Integrin signaling
140644533 (COL2A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
140644533 (COL2A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cboy00536
]
140644533 (COL2A1)
Glycosaminoglycan binding proteins [BR:
cboy00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
140644533 (COL2A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
Motif
Other DBs
NCBI-GeneID:
140644533
NCBI-ProteinID:
XP_072703557
LinkDB
All DBs
Position
27:complement(2296628..2315495)
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AA seq
1484 aa
AA seq
DB search
MPGRRPLRLAAALAILLLAAVAAQDRDLPEAGSCLQDGQSYSDKDVWKPEPCRICVCDTG
TVLCDEIICEELRDCPSPEIPFGECCPICPTDQPSGQPGPKGQKGEPGDIKDVVGPRGPP
GPQGPAGEQGQRGDRGEKGEKGAPGPXSRDGEPGTPGNPGPRPPGPPGPPGLGGNFAAQM
AGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPSGAPGPQGFQGNPGEPGEPGAAGPMGPRG
PPGPPGKPGDDGETGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAG
APGAKGESGSPGENGSPGPMGPRGLPGERGRPGPSGAAGARGNDGLPGPAGPPGPVGPAG
APGFPGAPGSKGEAGPTGARGPEGAQGPRGESGTPGSPGPAGAPGNPGTDGIPGAKGSAG
APGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGETGPAGPQGAPG
PAGEEGKRGARGEPGAAGPVGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPAGLAGPKG
ATGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPTGAPGEDGRPGPPGPQGARGQPGVMG
FPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSG
FQGLPGPPGPPGESGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPG
TPGTDGPKGATGPAGPNGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDG
ARGLTGPIGPPGPAGPNGEKGESGPPGPSGAAGARGAPGERGEPGAPGPAGFAGPPGADG
QPGAKGEQGEPGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG
RVGPPGPNGNPGPPGPPGSAGKDGPKGARGDAGPPGRAGDPGLQGPAGPPGEKGEPGEDG
PAGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGSAGDRGPPGPVG
PPGLTGPAGEPGREGNPGSDGPPGRDGAAGVKGDRGETGPVGAPGAPGAPGAPGPVGPTG
KQGDRGETGAQGPMGPSGPAGARGMPGPQGPRGDKGETGEAGERGLKGHRGFTGLQGLPG
PPGPSGDQGAAGPAGPSGPRGPPGPVGPSGKDGSNGMPGPIGPPGPRGRSGEPGPAGPPG
NPGPPGPPGPPGTGIDMSAFAGLGQAEKGPDPIRYMRADEAAGSLRQHDVEVDATLKSLN
NQIESIRSPEGSKKNPARTCRDIKLCHPEWKSGDYWIDPNQGCTLDAIKVFCNMETGETC
VYPNPSSIPKKNWWTSKTKDKKHVWFAETINGGFHFSYGDEDLAPNTANIQMTFLRLLST
EGSQNITYHCKNSIAYMDEETGNLKKAILIQGSNDVEIRAEGNSRFTYSVLEDGCTKHTG
KWGKTVIEYRSQKTSRLPIVDIAPMDIGGADQEFGVDIGPVCFL
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atgcccggccgccgcccgctccgcctcgcagccgccctcgccatcctcctcctcgccgcc
gtcgccgcgcaggaccgagacctccccgaagcaggcagctgcctgcaggacgggcagagc
tatagcgataaggacgtatggaagccggagccgtgccgtatctgcgtgtgcgacacgggg
accgtcctctgcgacgagatcatctgcgaggagctgcgggattgtcccagccccgaaatc
cccttcggagagtgctgccccatatgtcccactgaccaacccagcgggcaacctggcccc
aagggacagaagggtgaacccggtgacattaaagatgtcgtaggaccccgagggcctccg
ggaccgcagggcccggcaggcgagcagggacaacgaggggaccgcggtgagaaaggggag
aagggcgctcccggccccnggagcagggatggagaacctggcacccctggaaatcctggc
ccccggccccccggtcctcccggcccccctggcctcggtgggaacttcgcggctcagatg
gcaggcggcttcgacgagaaggctggaggcgcgcagatgggcgtcatgcagggacccatg
ggccccatgggaccccgcggcccccccggaccttccggtgctcccggtccccaaggattt
caaggcaaccccggcgagcccggcgagcccggcgctgctggtccgatgggtccccgggga
ccgccgggacctcctgggaaacccggtgatgacggcgagactggcaaacccggcaaatcc
ggcgagcgcggcccccccggcccccagggtgctcgtggcttccccggaacacccggtctc
cctggagtgaaaggccaccggggctaccctggcttggacggtgccaagggagaggcaggg
gctcctggagccaagggtgaatccggctcccctggcgagaacggctcccccggccccatg
ggtccccgcgggctgcctggagagagaggacgtcctggcccctctggcgctgcgggtgct
cgtggcaacgatggtctccccggcccagctggaccccctggacctgttggcccggctgga
gcccccggcttccctggcgctcccggctcgaagggtgaagctggtcccaccggcgcacga
ggtcccgagggtgcccagggtccccgtggtgaatccggcacccctggctctcctggcccc
gccggcgcccccggtaacccagggactgacggcatccccggcgcgaaaggctcggcgggt
gccccgggcatcgccggcgctccaggcttccccggcccccgcggcccgcccggaccccag
ggtgccaccggcccgctgggacccaagggacagacgggagaacccggcatcgcgggcttc
aaaggcgaacagggaccgaagggcgagacgggacccgcaggaccccaaggtgcccccggg
ccggctggtgaggaaggcaagagaggagcccgcggtgaacccggtgctgccggccccgtg
ggaccacctggagagaggggtgctcctggcaatcgcggcttccccgggcaggacgggctg
gctggacccaagggtgctccgggcgagcgtggccccgccggcctcgcgggtcccaaggga
gccaccggcgaccccgggcgccccggagagcccgggctgcccggagccaggggtctcacc
ggccgcccaggcgacgctggtcctcaaggcaaagttggcccaaccggtgctcctggcgag
gacggccgccccggcccccccggcccacagggtgctcgcggccagcccggcgtgatgggt
ttccccggtcccaaaggtgctaatggcgagcctggaaaagctggtgagaaaggactcccc
ggagccccggggctgcggggtctccctggcaaggacggtgagacgggagctgccggcccc
ccgggacctgccggtcctgcgggagagaggggagagcaaggagcccccggaccctccggc
ttccagggcctgcccgggccaccaggtccccccggagagagcggcaaacccggagatcag
ggtgttcccggagaagccggtgcccccggtcttgttggtcccagaggcgaacgcggcttc
cccggtgaacgtggctctcccggcgcacaagggctgcaaggtccccgtgggctccccggc
acaccaggcaccgacggacccaagggtgcaaccggaccggctggccccaacggcgcccag
ggtcccccggggctgcagggaatgcctggcgagagaggagcagccggcatcgctggtccc
aagggagaccggggagacgtcggagagaagggccccgagggagcccccggaaaggacggc
gcacgcggtctgacaggtcccatcggtccccccggccctgctggccccaacggcgagaag
ggtgaatccggccctcctggtccatccggcgctgccggtgcccgcggtgcccccggcgag
cgcggtgagcccggtgcccccggtcctgccggatttgctggccccccgggcgccgacggg
caacccggtgccaaaggcgaacaaggagagcccgggcagaagggtgacgccggcgctccc
ggtccccaaggtccctccggtgcacctggcccacagggtccaactggagtaactggtccc
aaaggagcccggggtgctcagggcccccctggagccaccggattccccggcgccgccggc
cgtgtgggaccacccggccctaacggtaaccccggcccccctggtccccctggctctgct
ggcaaagatggtcccaagggtgctcgtggtgatgccggtcccccgggccgtgccggtgac
cccggtctccaaggccctgccggtccccctggtgagaaaggcgaacccggcgaggatggt
cctgcgggtcctgatggtccccccggtccccaaggtttggcaggacagcgtggcatcgtc
ggtcttcccggacagcgtggcgagagaggcttccctgggctgccggggccatcgggtgaa
cctgggaaacaaggagcacccggctctgcaggtgaccgcggcccccccggccccgtgggt
ccccccggtctgacgggtcctgccggcgaacctggacgcgagggtaaccccggctctgat
ggaccccccggcagagacggcgcagctggcgtgaagggcgatcgtggtgagaccggtccc
gtaggtgcccctggcgctcccggtgcccccggcgctcctggccctgttggtcccaccggc
aaacaaggagacagaggcgagacgggtgcacaaggtcccatgggtccctccggtcctgct
ggcgctcgagggatgccgggtccccaagggcctcgtggtgacaagggtgagacaggagag
gctggagagagagggctgaagggccaccgtggcttcacgggtctgcagggtcttcccgga
ccacccggtccttctggagaccaaggtgctgctggtcctgcgggtccctctggtcccagg
ggtcctcccggccccgtcggcccctctggcaaagacggctccaacggcatgcccggcccc
atcggtcctcccggcccccgtggacgaagtggtgaaccaggtcctgcgggtcctcctgga
aatccaggtccccctggtcctcccggccccccaggcaccggcatcgacatgtcagctttt
gctggcttgggccaggcagagaagggtcccgaccccatccgctacatgcgggcggacgag
gctgccggcagcctgcggcagcacgacgtcgaggtggatgccacgctcaagtccctcaac
aaccagatcgagagcatccgcagccccgagggctccaagaagaacccagccaggacctgc
cgcgacatcaagctttgccatcccgagtggaagagcggagactactggatcgacccgaac
cagggctgcaccttggacgccatcaaagttttctgcaacatggagacgggcgagacctgc
gtctaccccaaccccagcagcatccccaagaagaactggtggaccagcaagaccaaagac
aagaagcacgtctggttcgcagagaccattaacggcggtttccactttagctacggcgat
gaagacctggctcccaacaccgccaacatccagatgaccttcctccgcctcctgtccacc
gaaggctcccagaacatcacttaccactgcaagaacagcatcgcctacatggacgaggag
acgggcaacctgaagaaagccatcctcatccagggatccaacgacgtggagatcagagcc
gagggcaacagcaggttcacgtacagcgtcttggaggacggttgcacgaaacacactggc
aaatggggcaagacagtcattgagtaccgatcgcagaagacctcgcgcctgcccattgta
gatattgcacctatggacattggtggagccgatcaggagtttggcgtggatattggccca
gtctgcttcttgtaa
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