Ciconia boyciana (Oriental stork): 140644567
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Entry
140644567 CDS
T10948
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140644567 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cboy03021
]
140644567 (SMARCC2)
03036 Chromosome and associated proteins [BR:
cboy03036
]
140644567 (SMARCC2)
Transcription machinery [BR:
cboy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
140644567 (SMARCC2)
Chromosome and associated proteins [BR:
cboy03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
140644567 (SMARCC2)
PBAF complex
140644567 (SMARCC2)
GBAF(ncBAF) complex
140644567 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
CD99L2
Motif
Other DBs
NCBI-GeneID:
140644567
NCBI-ProteinID:
XP_072703641
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All DBs
Position
27:551950..561308
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AA seq
1200 aa
AA seq
DB search
MAVRKKDGGPNVKYYEASDTVSQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLARPNIFLHQEIEPKLLSKLKDIVKRHQGTVTEDKSNASHIVCP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPANEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVTDEKSPVARRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYNKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETAGKDEEENGTGSKGEQAKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQSDGDAKTGRKSKEIEDLVTETVKGKPELQTSASQQMLNFPDKSKEKP
ADMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
RIEESGTEEARAEAQPAEEKKEAKEPRDSTAEEEVKEKPGEVPKKEEEKGKEAEGEKEPD
KGDGDAGEPEKEKEAKDGLDEAPKEPPEPEAERKAKVERDIGEGNLSTAAAAALAAAAVK
AKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQ
AFHMEQLKYAEMRARQQHFQHLQQQQQQQPPPLPPGAQPLPAAGTPLAPAAHPLGAPPAP
AMVAPAEPVGQPLPGAPPPQPPPPPGAPAVPHAPAPFPGQQPPSQSLAGSLGGSGHPAVP
GNAPAALPFGLPPSAIPFSMANPPAEPLGATFPANPPALPLHGALASSMPSGGLPPPPHP
PGLALPHLAGGSAAAHSPAIVAAVQGSLLPNPGLLADQGPPADGPHRTQPQHGHPCPPTQ
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtcaagtactacgaggcctcggacacc
gtcagccagttcgacaacgtccgcctctggctcggcaagaactacaagaagtacatccag
gccgagccccccaccaacaagtcgctgtcgagcctggtggtgcagctgctgcagttccag
gaggaggtcttcggcaagcacgtcagcaacgcgcccctcaccaagctgccgataaaatgc
ttcttggatttcaaggcggggggagctctgtgccacatcctggcagcggcctataaattc
aagagcgaccaaggatggcggcgtttcgatttccagaatccctcgcggatggaccgcaac
gtggagatgttcatgaccatcgagaaatccctggtgcagaacaactgcctggcccggccc
aacatcttcctgcaccaggagatcgagcccaagctgctgagcaagctgaaagacatcgtc
aagaggcaccagggcacggtgaccgaggacaagagcaacgcgtcccacatcgtctgccct
gtccctgggaacctggaggaagaggagtgggtccggccggtcatgaagcgcgacaagcag
gtcctgctgcactggggctactaccccgacagctacgacacctggatccctgccaacgag
attgaggcctctgtggaggatgccccaacaccggagaagccccggaaggtccacgccaag
tggatcctggacacggacaccttcaacgagtggatgaacgaggaggactatgaggtgacg
gacgagaagagccccgtcgcccgcaggaagaagatctcggccaagacgctgacggacgag
gtgaacagccctgactcggaccggcgggacaagaaggggggcaactacaagaagcgaaag
cgctcgccctccccctcgcccaccccagaggccaagaagaagaacgcgaagaagggaccc
tccaccccctacaacaaatccaagcgcgggcaccgtgaggaggagcaggaggatctgacg
aaggacatggacgagccctcgcctgtccccaacgtggaggaggtcaccctgcccaagaca
gtcaacaccaagaaggactcggagtctgcgcccgtcaaggggggcaccatgacggacctg
gatgagcaggaagatgagagcatggagacagccggcaaggacgaggaggagaacggcacc
gggagcaagggggagcaagccaagaaccctgacctgcacgaggacaacgtgacagagcag
acccaccacatcatcatccccagctacgccgcctggttcgactacaacagcgtccatgcc
atcgagcgccgagccctgcccgagttcttcaatggcaagaataaatccaagacccccgaa
atatacttggcttaccgcaacttcatgatcgacacgtaccggctgaacccacaggagtac
ctgacctccacggcgtgccgccgcaacctggccggggacgtctgtgccatcatgcgggtc
cacgccttcctggagcagtggggcctcatcaactaccaggtggacgccgagagccggccc
acccccatgggccccccgccaacctcccacttccacgtcctggccgatacgccctcgggg
ctggtgccgctgcagcccaagacgccccagggccggcagagcgacggcgacgccaagacg
ggccgcaagagcaaagagatcgaagacctcgtcaccgagacggtgaaggggaagccggag
ctgcagacctcggcctcacagcagatgctgaacttccctgacaagagcaaggagaagccg
gccgacatgcagaacttcggcctccgcaccgacatgtacaccaagaagaacgtcccctcc
aagagcaaagctgccgccagtgccacaagggagtggacggagcaggagacgctgctgctg
ctggaggccctggagatgtacaaggacgactggaacaaggtgtcggagcacgtgggcagc
cggacgcaggacgagtgcatcctgcacttcctgcggctgcccatcgaggacccctacctg
gaggactcggaggcgtccctggggccgctggcctaccagcccatccccttcagccagtcc
ggcaaccccgtcatgagcaccgtcgccttcctggcctccgtcgtcgacccccgcgtcgcc
tctgccgctgccaagtcagctctggaggagttctccaagatgaaggaggaggtgcccacg
gccttggtggaggcccacgtccgcaaggtggaggaggcggccaaggtgacgggcaaggcc
gaccccgcgttcgggctggagagcagcggcatcgccggcaccacctccgacgagccggag
cggatagaggagagcggcacggaggaggcgcgggcggaggcgcagccggcggaggagaag
aaggaggcaaaggagccccgggacagcactgccgaggaggaggtgaaggagaagcccggg
gaggtgcccaagaaggaggaggagaaggggaaggaggcggagggcgagaaggagcctgac
aagggtgatggcgatgcaggggagccggagaaggagaaggaggcgaaggacgggctggac
gaggcgcccaaggagccaccggagcccgaggccgagcgcaaagccaaggtggagcgggac
atcggtgaagggaacctctccaccgccgccgctgccgccctggctgccgccgccgtgaag
gccaagcacctggcagccgtggaggagcgcaagatcaagtcgctggtggcactgctggtg
gagacgcagatgaagaagctggagatcaagctgcggcacttcgaggagctggagaccatc
atggaccgggagcgcgaggccctggagtaccagcggcagcagctgctggcggaccgccag
gccttccacatggagcagctgaagtacgcggagatgcgcgcccgccagcagcacttccag
cacctccagcagcagcagcagcagcagccgcccccgctgccaccgggggcccagcccctg
cccgccgccggcacccccctggcccccgccgcccacccgctgggcgcgccgcccgccccc
gccatggtggcccccgccgagcccgtggggcagccgctgcccggggcccccccgccgcag
ccgcccccgccgccaggcgccccggccgtcccgcacgccccggcaccgttccccgggcag
cagccgccatcccagagcctggctgggagcctcggtggcagcggccaccccgccgtgccc
ggtaatgcgcccgcggccttgcccttcggattgcctccatccgccatcccatttagcatg
gctaacccccccgccgagcccctcggcgccaccttccccgctaacccgcccgccctcccg
ctgcatggggccctcgccagcagcatgccgtccggggggctgccccccccgccccaccca
cccggcctggccctgccgcacctcgcggggggctcggccgccgcgcacagccccgccatc
gtggccgccgtgcagggaagcctccttcccaaccccggcctcctcgcagaccaaggcccc
cctgcagacggaccccatcgcacccagccccagcacggccacccctgtccccccacgcag
tga
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