Ciconia boyciana (Oriental stork): 140644871
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Entry
140644871 CDS
T10948
Symbol
DDX3X
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
140644871 (DDX3X)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cboy03019
]
140644871 (DDX3X)
03041 Spliceosome [BR:
cboy03041
]
140644871 (DDX3X)
03036 Chromosome and associated proteins [BR:
cboy03036
]
140644871 (DDX3X)
Enzymes [BR:
cboy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140644871 (DDX3X)
Messenger RNA biogenesis [BR:
cboy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
140644871 (DDX3X)
mRNA cycle factors
Common to processing body (P body) and stress granule
140644871 (DDX3X)
Spliceosome [BR:
cboy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
140644871 (DDX3X)
Chromosome and associated proteins [BR:
cboy03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
140644871 (DDX3X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
140644871
NCBI-ProteinID:
XP_072704139
LinkDB
All DBs
Position
1:complement(124807677..124826526)
Genome browser
AA seq
652 aa
AA seq
DB search
MSHVAVENALSLDQQFSGLDLNSSDSQSEGSSSSKGRYIPPHLRNREASKQGFDSGGWSS
SRDKDAYSSFGARSDRGAKSSFFDRGNGSRGGRYEERGRGGDYDRSGFGRFDRGGNSRWC
DKSDEDDWSKPLPPSERLEQELFSGSNTGINFEKYDDIPVEATGSNCPPHIESFSDVDMG
EIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPG
DALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFAYRSRVRPCVVYGGADIGQ
QIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQD
TMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKR
SFLLDLLNATGKDSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFR
SGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNER
NINITKDLLDLLVEAKQEVPSWLENMAYEQHHKGGGSRGRSKSSRFSGGFGARDYRTSSG
SGSSSFSSSRSTSSRSGGSGSRGFGGGGYGGFYNSDGYGGNYNSQGVDWWGN
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggcggtggaaaatgccctcagtctagaccagcagttttctggtctagac
ttgaattcctcagactctcagagtgaaggaagctcttcaagcaaaggccgatacattcct
cctcatttgaggaacagggaagcttcaaaacagggttttgatagtggtggctggagttct
agcagagacaaggatgcatacagcagctttggtgcacggtctgaccggggagcaaaatca
agcttctttgaccgtggaaatggatcaagaggaggaagatatgaagagcgtggaagaggt
ggcgactatgataggagcggctttggtagatttgaccgtggtgggaatagccgctggtgt
gacaaatcagatgaagatgactggtcaaagcctcttcccccaagtgaacgcctggaacaa
gagctcttttcaggaagcaatactggcattaactttgagaaatatgatgatattcctgtt
gaagcaacaggcagcaactgtcctccacatattgaaagtttcagtgatgttgacatggga
gaaattattatgggaaacattgagctcacacgctacacccgtcctactccagtccagaaa
catgcaatacctattattaaagagaagagagacttgatggcctgtgctcagacagggtct
gggaaaacggctgcatttcttctaccaatattgagccagatctatgcagatggccctggt
gatgccttgagagctatgaaggagaatggaaggtatgggcgccgtaagcaatatccgatc
tcgctggtcttggctcccactagagaactggctgtgcagatctatgaggaagccagaaag
ttcgcataccgttccagagttcgtccctgtgttgtatacggtggtgcagacattggtcag
cagatacgtgacttagaacgtggatgtcacttgcttgtagcaactccaggacgactggtt
gatatgatggagaggggaaagattggattggatttctgcaagtacctggtgcttgatgaa
gctgacaggatgcttgatatggggtttgaacctcaaattcgtcgaattgttgaacaagat
actatgccaccaaagggggttcgtcataccatgatgttcagtgctactttccccaaggaa
atccagatgcttgctcgtgacttccttgatgaatatatctttctggctgtgggcagagta
ggttctacatctgagaatatcacacagaaggtagtatgggttgaagagtcagacaaacga
tcgtttctgcttgacctgctaaatgctacaggcaaggattccttgactctggtgttcgtg
gaaactaaaaagggcgcagatgctcttgaggacttcttgtaccatgaaggatatgcttgt
acaagtatacatggagatcgctctcaaagagacagagaggaggcactgcaccagttccgt
tcgggcaagagcccaattcttgttgccacagcagtagcagcaagaggactggatatctca
aatgtaaagcatgtcataaactttgacttgccaagtgacattgaagagtatgtacatcgt
attggtcgtacaggcagagtaggaaaccttggtcttgccacctcattcttcaatgagagg
aacataaacatcaccaaggacttgcttgatcttcttgttgaggctaagcaagaagtacca
tcttggctggaaaacatggcttatgaacagcatcacaaaggaggtggcagccgtgggcga
tctaagagcagtaggttcagtggaggatttggtgccagagactatcgaacaagtagtggt
tctggcagcagtagctttagtagcagtcgatcaaccagcagccgcagtggaggaagtggc
agcagaggatttggaggtggtggttatggaggcttctacaacagtgatggatatggcgga
aactataactcccagggggttgactggtggggcaactga
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