Ciconia boyciana (Oriental stork): 140645201
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Entry
140645201 CDS
T10948
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140645201 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cboy03021
]
140645201 (SMARCA4)
03036 Chromosome and associated proteins [BR:
cboy03036
]
140645201 (SMARCA4)
Transcription machinery [BR:
cboy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
140645201 (SMARCA4)
Chromosome and associated proteins [BR:
cboy03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
140645201 (SMARCA4)
Chromatin remodeling factors
BAF complex
140645201 (SMARCA4)
PBAF complex
140645201 (SMARCA4)
GBAF(ncBAF) complex
140645201 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
140645201
NCBI-ProteinID:
XP_072704605
LinkDB
All DBs
Position
31:complement(337311..366923)
Genome browser
AA seq
1646 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPLPPQG
PGGYAQDNMHQMHKPMDSMHEKGITDDPRYSQMKGMGMRPGGHAGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPANGPSSGPQMSSGPGGVPLDGTDPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSGTGPVQGPVQGPGP
GPTPPNYNRPHGIGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKL
IPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVQLHQKQNRITPIQKPRGLD
PVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVV
CMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQH
AKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLI
DQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPD
GEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGS
EEEEEEEEEEQPQPAQPALPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQA
LARGLQSYYAVAHAVTERVDKQSTLMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGL
GKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRA
FVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA
PRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETIL
IIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSE
KDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFE
LLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFN
EPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLR
LCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDENRYSA
GSGSGSASFPHTASTLCLNAELEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDR
RREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSL
TEKQWLKVYMAIEEGTLEEIEEEVRQKKSSRKRKRDTDVGSATPTTSTRSRDKDDDSKKQ
KKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYEL
IRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSV
RQKIEKEEESEGEDSEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGRRRTSRGSR
AKPVVSDDDSEEEQEEDRSGSGTEED
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactccggatcctccgatgggaggaacgcctcgcccggggccctctccggggccg
ggcccctctccgggcgccatgctgggacccagcccgggaccctctcccggctctgcacac
agtatgatgggacccagccccggaccaccctcggcaggacacccgctgccgcctcagggg
ccggggggctacgctcaggacaacatgcatcagatgcacaagcccatggactccatgcat
gagaagggaataaccgacgatcctcgctacagccagatgaaagggatgggaatgcggccc
ggcgggcacgcgggaatgggtcctcctccgagcccgatggatcaacactctcaaggttac
ccttctccgctcggcggctccgagcacgcctcgagtccggttccggctaacggtccgtcc
tctggccctcagatgtcctctggccccggcggagtccccttggatggcactgacccccaa
gcgctggggcagcagaaccggggcccgaccccttttaaccagaaccagctgcaccagctg
agagctcagatcatggcctacaagatgctggccagaggccagcctctccctgaccacctt
cagatggcggtgcaggggaagcgacccatgcctggaatgcagcagcaaatgccgacacta
cctccgccctccgtgtccgggacaggacccgtgcaaggaccagtgcaagggcctggaccg
ggaccgacacctccaaactataacagacctcacggtataggagggcctaacatgccccct
cccggaccctcaggagttcccccaggaatgcctgggcaaccccccggcggcccccccaag
ccctggccggaaggaccaatggcaaatgctgcagcccccactagcacacctcagaaactg
attcctccccagcccaccggccggccctcgccagcccccccggcggtgcctcccgcggcg
tcgcccgtgatgccgccccagacgcagtctcccgggcagccggcccagccggcccccatg
gtgcagctccaccagaagcagaaccggatcacgcccatccagaaacccagaggactcgac
ccggtggaaatcctgcaggagagggagtacaggctgcaagctcgcatcgctcacagaatc
caagagctggaaaaccttcctggctccctggctggtgacctgagaaccaaagctaccatt
gaacttaaagcactaaggctgcttaattttcagcgacagctgcgtcaggaagtcgtggtg
tgcatgaggcgagacacagccttggaaacggccctgaacgccaaggcgtacaagcgcagc
aagcggcagtccctgcgcgaggctcgcatcaccgagaagctggagaagcagcagaagatt
gagcaagaacggaaacgcaggcagaagcaccaggaatacctcaatagcattctccagcac
gctaaagatttcaaggaataccatcgctccgtcacaggcaaaattcaaaagctgaccaag
gcggtggctacttaccacgccaacacggagcgcgagcagaagaaggaaaacgagaggatc
gagaaggagagaatgcgccgtctgatggctgaagatgaggaagggtaccgcaaactcatc
gatcagaagaaggacaagcgcttggcctacctgctgcagcagacggacgagtacgtagcc
aacctgacggagctggtgcggcagcacaaggccgcgcaggtggccaaggagaagaagaag
aaaaagaaaaagaagaaggcagagaatgcggaagggcagactccggcgatcggaccagat
ggcgaaccactggacgagacgagccaaatgagcgatctccctgtcaaagtgatccacgtg
gagagcggcaagatcctcaccggcaccgatgccccgaaggcggggcagctggaagcctgg
ctggagatgaaccccggatatgaagtagctccaagatctgacagtgaagaaagtgggtca
gaagaggaggaggaggaggaggaagaggagcaaccgcaacctgctcagcctgccctgcct
gtggaggagaagaaaaagatccccgatccagacagcgacgatgtctcagaagtggatgcc
agacacattatcgagaatgctaagcaagacgttgatgatgaatacggggtgtctcaagcg
ctggcgaggggcctgcagtcgtactacgccgtggcccacgccgtcaccgagagggtggac
aagcagtccacgctgatggtcaacggggtcctcaagcagtaccagatcaaaggtctggag
tggctggtgtccctctacaacaacaacctgaacggcatcctggcagatgaaatgggtctg
ggcaaaaccatccagaccatcgctttaatcacatacctcatggagcacaaacggatcaac
ggacccttcctcattatcgtacctctctcaactctgtcgaattgggcgtatgagtttgac
aaatgggctccttctgtggtgaaggtctcgtacaagggctctccagcagcaagacgggca
ttcgtacctcagctccgaagcgggaaattcaatgtcttgctcactacttatgaatatatc
atcaaagataagcacatcctggccaagatccgctggaagtacatgatcgtggacgagggc
cacagaatgaagaaccaccactgcaaactcacccaggtcctcaacacgcactacgtggcc
ccgcgccgtctgctgctgacgggaaccccgctgcagaacaagctcccggagctgtgggcc
ctgctcaatttcctcctgcccaccatcttcaagagctgtagcacattcgagcagtggttt
aacgctcctttcgccatgacgggagaaaaggtggacctgaacgaagaagaaaccatcctg
atcattcggcgcttgcacaaagtgctgcgccccttcctgctgcggaggctgaagaaggaa
gtagaagcgcagctgcctgaaaaggtggagtacgtgatcaagtgtgacatgtccgctctg
cagagggtcctctacaggcacatgcaggccaagggggtgctcctcacggacggctccgag
aaggacaaaaagggtaaaggcggtacgaaaaccttaatgaacacgatcatgcagctgcgg
aagatctgcaaccacccctacatgtttcagcatatagaggaatccttttctgagcacttg
gggttcacgggaggtatcgtgcaaggactggatttgtaccgtgcctcaggcaaatttgag
ctcctcgacagaattctccccaaactacgagccaccaaccacaaggtgctgctcttctgc
cagatgacctccctcatgaccatcatggaagattattttgcttaccgcggattcaaatac
ctcaggctggacggcaccactaaagcggaagaccggggcatgttgttaaagactttcaat
gagccaggctccgagtacttcatttttttgctgagcactcgggctggtgggctgggtctg
aacctccagtctgccgatactgtgattatctttgacagcgactggaaccctcaccaggac
ctgcaggcgcaagaccgagcgcaccgcatcgggcagcagaacgaagtgcgcgttctccgg
ctctgcaccgtcaacagcgtggaggagaagatccttgccgccgccaaatacaagctgaat
gttgatcagaaggttatccaagccggcatgtttgaccagaagtcctcgagccacgagcga
agagccttcctccaggctatcttggagcacgaggagcaggacgagaacagatacagcgcg
ggcagcggcagtggcagtgcaagcttcccccacactgcctcaaccctgtgcctgaacgct
gagttggaggaaccacctctaaaggaagaagacgaagttcccgatgacgaaacggtcaac
cagatgattgcgcggcacgaagaggagtttgaccttttcatgcgcatggacctggaccgc
aggcgggaggaggcgcgaaaccccaagcgcaaaccgcgcctgatggaggaggacgagctg
ccatcttggatcatcaaggatgatgccgaggtggagaggttgacgtgtgaggaggaggag
gaaaagatgtttgggcgaggctcgcggcaccgtaaggaggtggactacagcgactcgctg
acggaaaagcagtggctcaaggtatacatggcgatcgaggaggggacgctggaggagatc
gaggaggaggtgcgccagaaaaaatcctcccgtaaacgcaagcgggacacggacgtcggc
tccgccactcccaccaccagcacccgcagccgggataaggacgatgatagcaaaaagcag
aagaagcgcggcaggccgccggcggagaaactctccccgaacccccccaacctcaccaaa
aaaatgaagaagatcgtggacgccgtcatcaagtataaggacagtagtagtggacggcag
ctcagcgaagtcttcatccagctgccttcccgcaaggagctgccggagtactacgagctc
atccgcaagcccgtcgacttcaagaaaatcaaggagcgcatccgcaaccacaagtaccgg
agcctgaacgacctggagaaggacgtcatgctgctgtgccagaacgcgcagaccttcaac
ctcgagggctctctgatctacgaggactccatcgtcctgcagtccgtcttcaccagcgtg
aggcagaaaattgagaaggaggaggagagcgaaggtgaggacagtgaggaggaggaggaa
ggagaagaggaaggatccgaatccgagtctcgctccgtcaaggtgaagatcaagctgggg
cggaaggagaaggcgcaggaccggctgaagggccgccggcgcaccagccgcggctcccgc
gccaagcccgtggtgagcgacgacgacagcgaggaggagcaggaggaggatcgctccggc
agcggcaccgaagaagactaa
DBGET
integrated database retrieval system
