Ciconia boyciana (Oriental stork): 140645374
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Entry
140645374 CDS
T10948
Symbol
SYMPK
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy03015
mRNA surveillance pathway
cboy04530
Tight junction
Brite
Transcription machinery [BR:
cboy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
140645374 (SYMPK)
Messenger RNA biogenesis [BR:
cboy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
140645374 (SYMPK)
U7-dependent histone pre-mRNA processing factors
140645374 (SYMPK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Cnd1
INTS7_N
Motif
Other DBs
NCBI-GeneID:
140645374
NCBI-ProteinID:
XP_072704839
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All DBs
Position
33:complement(1291373..1307554)
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AA seq
1300 aa
AA seq
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MRAAPLPASWRGAEPREAPPLGLQLPAGPFALTLGRGVAARAQGRAEAAERAGGGRAMAG
PGGAEGPSPRMSVASQFFSEEECGSDGMSTSERVVDLLNQAALISNDAKINLLKQVQELI
INKDPTLLDNFLDEIIAFQAVKSIEVRKFVVGFIEEACKRDIELLLKLIANLNMLLKDEN
VNVVKKAILTMTQLYKVALQWMVKSKVISELQEACWEMMAAMASDIILLLDSDNDGIRTH
AIKFVEGLIITLSPRMADSDVPKRHENDISLERIPKDHPYIKYNVLWEEGKAALEQLLKF
MVHPAISSINLTAALGSLATIARQRPMFMAEVIQAYETLHANLPPTLAKSQVSSVRKNLK
LHLLSVLRHPSSGDFQPQITTLLVDLGTQQAEIARSMPSPRDARKRPRDEPDAALKKMKI
EPPLGEDDEDKDLEPTTAAAPKAAGQTSVPSDTDITAEFLQPLLTPENVANLVLISMVYL
PEAMPASFQATYTPVESAGTEAQIKHLSRLMATQMTAAGLGPGVEQTKHLKEEPKEEKTA
KPESVVIKRRLSALAQGQAISVLGAQGSAANLLEEEAPQAKRRPEPIIPATQPRLAGAGG
RKKVFRLGDVLKPLSDAQMEKLKLSAVKRILRAERAVACSGAAQARVKILASLVTQFEVP
LKSEVLAFILDDIRGRLDLAFAWLFQEYNAYLSRFPAGSLERYDECLIGLLAGLQEKPDQ
KDGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLD
LSSHEKDKVRQQALLFIKRMYEKDQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVA
APWTEETIKQCLYLYLALLPHNHKLIHELASVYTEAIADIKRTVLRVIEQPIRGMGMNSP
ELLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLE
KKEVIQALPKLIKLNPIVVKEVFNRLLGTQHGDGASTVSPLNPGELLIALHNIDSSKCDM
KSIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQALTMYPRLGGFVMNI
LSRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVVLQLPPQLAAIFDKCPELREPLLSHVR
ALTPHQQAHIPLSTMAILEASARHEPDAREGPPGEEKPPKRASEEEAKGKAVPPAPGGGP
SAGPPPPEAPPDLGGADLEPPPIFISVPEDEESSGEPGPPDATLDPSAAPQGPPASTEPP
SRPRPRQRPAAPSSEPPPGTQSPEVPPGGAPDAPPGPAES
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgctgcgcccctccccgcgtcctggcggggggcggagccgagagaagccccgccc
ctcggcctacagctcccggcgggtccattcgcgctgacgttagggcggggcgtggctgcg
cgtgcgcaggggcgagcggaggccgccgagcgcgcgggtggcggcagggccatggcgggg
ccggggggggccgagggccccagcccccgcatgagcgtggcctcccagttcttcagcgag
gaggagtgcggcagcgacggcatgagcacctccgagcgggtggtggatctcctcaaccag
gcggccttgatcagcaacgacgccaagatcaacctgctcaagcaggtgcaggagctgatc
atcaataaggaccccacgctgctggacaacttcttggatgagatcatcgccttccaggcc
gtcaagtccatcgaggtgcggaagttcgtggtgggcttcatcgaggaggcctgcaagcgg
gacatcgagctgctgctgaagctcatcgccaacctcaacatgctgctgaaggacgagaac
gtcaacgtggtgaagaaggccatcctcaccatgacccagctctacaaggtggccctgcag
tggatggtgaaatcgaaggtgatcagcgagctgcaggaggcttgctgggagatgatggcg
gccatggccagcgacatcatcctcctcctcgactcggacaatgacggcatccgcacccac
gccatcaagttcgtggaggggctcatcatcaccctctcgccccgcatggccgactccgac
gtccccaaacgtcacgagaacgacatcagcctcgagcgcatccccaaggatcacccctac
atcaaatacaacgtcctgtgggaggagggcaaggccgccctggagcagctcctcaagttc
atggtgcacccggccatctccagcatcaacctgacggccgccctgggttccctggccacc
atcgcccgccagcggcccatgttcatggccgaggtcatccaagcttacgagaccctccac
gccaacctgccccccaccctggccaagtcgcaggtgagcagcgtccggaagaacctgaag
ctgcatctcctgagcgtcctgcggcacccgtcctcgggggacttccagccccagatcacc
accctcctcgtcgacctgggcacccaacaggccgagatcgcccgcagcatgcccagcccc
cgcgacgcccgcaagcgaccccgcgacgagcccgacgccgccctcaagaagatgaagatt
gagccccccctgggcgaggatgatgaggacaaggacctggaaccgacgacggcggcggca
cccaaagcggccggccagaccagcgtcccctcggacacggacatcaccgccgagttcctg
cagccgctcctcaccccggagaacgtcgccaacctggtgctgatcagcatggtgtacctg
cccgaggccatgcccgcctccttccaggccacctacacccccgtggagtcggccggcacc
gaggcgcagatcaagcacctctcccggctcatggccacccagatgacggcggcggggctg
ggcccgggcgtggagcagacgaagcacctgaaggaggagccgaaggaggagaagacggcc
aagccggagagcgtggtgatcaaacggcggctgtcggcgctggcccagggccaggccatc
tcggtgctgggtgcccaaggctcggccgccaacctgctggaggaggaagccccccaagcc
aaacgtcgccctgagcccatcatcccggccacgcagccccggctggcgggcgccggcggc
cgcaagaaggttttccgcctgggcgacgtcctcaagccgctgagcgacgcgcagatggag
aagctgaagctgagcgccgtcaagcgcatcctgcgcgccgagcgcgccgtcgcctgcagc
ggggccgcccaggcccgcgtgaagatcctggcctcgctggtgacgcagttcgaggtgccg
ctgaagagcgaggtgctggccttcatcctcgatgacatccgcggccgcctggacctggcc
ttcgcctggctcttccaggagtacaacgcctacctgagccgcttccccgccggcagcctg
gaacgctacgacgagtgtctcatcgggctcctcgccggcctccaggagaagcccgatcag
aaggacgggattttcaccaaagtggtgctggaggcgccgctgatcaccgagagcgcgctg
gaggtcatccgcaagtactgcgaggacgagagccggacctacctgggcatgtccaccctg
cgcgacctcatcttcaagcggccgtcgcggcagttccagtacctccacgtcctgctggac
ctcagctcccacgagaaggacaaggtccgccagcaggccctgctgttcatcaagcgcatg
tacgagaaggaccagctgcgggagtacgtggagaagttcgccctcaactacctgcagctc
ctggtgcaccccaacccaccctccgtcctcttcggggccgacaaggacacggaggtggcg
gcgccgtggacggaggagaccatcaagcagtgcctctacctctacctggcgctgctgccc
cacaaccacaagctcatccacgagctggcctccgtctacaccgaggccatcgccgacatc
aagcgcaccgtcctgcgggtcatcgagcagccgatccgcgggatggggatgaactcgccc
gagttgctgctgctggtggagaactgccccaagggagccgagacgttggtgacgcgctgc
ctgcacagcctgacggacaaagtgccgccgtcacccgagctggtgaagagggtccgcgac
ctctatcacaagcggctgccggacgtgaggttcctcatccctgtcctcaacgggctggag
aagaaagaggtgatccaggcgctgcccaaactcatcaagctcaaccccatcgtggtcaag
gaggtcttcaaccgcctgctggggacgcagcacggtgacggcgcctcgaccgtgtccccg
ctgaacccgggcgagctgctgatcgccctgcacaacatcgactcctccaagtgcgacatg
aagtccatcatcaaggccaccaacctgtgcttcgccgagcgcaacgtctacacctcggag
gtgctggcggtggtgatgcagcagctgatggagcagagccccctccccatgctcctcatg
cgcaccgtcatccaggccctcaccatgtacccccgcctgggcggcttcgtcatgaacatc
ctctcccgcctcatcatgaagcaggtgtggaagtaccccaaggtctgggagggcttcatc
aagtgctgccagcgcacgaagccccagtccttccaggtggtcctgcagctgcccccccag
ctggccgccatcttcgacaagtgccccgagctccgcgagcccctgctcagccacgtccgg
gccctcaccccccaccagcaagcccacatcccgctctccaccatggccatcctggaggct
tccgcccgccacgagcccgacgcccgggaggggccgcccggagaggagaagcccccgaag
cgggcgagcgaggaggaggcgaaggggaaggcggtgcccccagccccgggggggggtccc
agcgcggggccccccccccccgaggcaccccctgacctggggggggccgacctcgagccc
ccccccatcttcatcagcgtccccgaggatgaggagagctcaggggagccgggtcccccc
gacgccacccttgacccctccgcagccccccaaggaccccctgccagcacggagcccccc
agccgcccccggccgaggcagcgcccagcagccccctcctcggagccgccccccggcacc
cagagccccgaggtgccccccgggggggcccccgatgcccccccagggccggccgagagc
tga
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