Ciconia boyciana (Oriental stork): 140645448
Help
Entry
140645448 CDS
T10948
Symbol
ERCC2
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy03022
Basal transcription factors
cboy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
140645448 (ERCC2)
09124 Replication and repair
03420 Nucleotide excision repair
140645448 (ERCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cboy03021
]
140645448 (ERCC2)
03036 Chromosome and associated proteins [BR:
cboy03036
]
140645448 (ERCC2)
03400 DNA repair and recombination proteins [BR:
cboy03400
]
140645448 (ERCC2)
Enzymes [BR:
cboy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
140645448 (ERCC2)
Transcription machinery [BR:
cboy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
140645448 (ERCC2)
Chromosome and associated proteins [BR:
cboy03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
140645448 (ERCC2)
DNA repair and recombination proteins [BR:
cboy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
140645448 (ERCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
DEAD
ResIII
SesA
MGT5A_N
Motif
Other DBs
NCBI-GeneID:
140645448
NCBI-ProteinID:
XP_072704967
LinkDB
All DBs
Position
33:complement(124653..131863)
Genome browser
AA seq
760 aa
AA seq
DB search
MKLNIDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLSLIVAYQ
RARPLDVTKLIYCSRTVPEIEKVIEELRKLMDFYEKELGEKVPFLGLALSSRKNLCIHPE
VSSLRFGKEVDSRCLSLTASYVRAQHQRDGSLPACRFFEDFDTHGREVPIPYGIYNLDDL
KAHGRQKGWCPYFLARYSILHANIVVYSYHYLLDPKIADLVSKELARKSVVVFDEAHNID
NVCIDSMGVNITRRTLDRCQANVATLQATIQKIKETDARRLADEYRRLVEGLREASMARE
TDLYLANPVLPDEILQEAVPGSIRTAEHFVGFLKRFVAYLRARVRGPRVVQESPPAFLKD
LYEKVCIERKPLRFCAERLHSLLRTLEIVDVADFSAITLVANFATLVSTYAKGFTIIIEP
FDDRTPTIANPILHFSCMDASIAIKPVFERFQSVIITSGTLSPLDIYPKILDFRPVTMAT
FTMTLARTCLCPMIVGRGNDQVAISSKFETREDIAVIRNYGNLLLELSAVVPDGIVAFFT
SYQYMENIVASWYEQGILENIQRNKLIFIETQDGAETSMALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRALRGKTDYGLMVFADKRFARADKRGKLPRWIQEHITDANLNLTVDEAVQVAKFF
LRQMAQPFHQEDQLGLSLLTLEQLQSEEVLQRIEQIAQQV
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaacatcgacggcctcctggtctacttcccctatgactacatctaccccgag
cagttctcctacatgctggagctcaagaggaccttggacgccaagggccacggtgtgctg
gagatgccctcggggaccgggaagacggtgtcgttgctgtcgctcatcgtcgcctatcag
cgggcccggccgctggacgtcaccaaactcatctactgctcccgcacggtgccggagatt
gagaaggtgatcgaggagctgcggaagctgatggatttctacgagaaggagctgggggag
aaggtgccgttcctggggctggcgctgagctccaggaagaacctctgcatccaccccgag
gtgtcctcgctgcgcttcgggaaggaggtggacagccggtgcctgagcctgacggcctcc
tacgtgcgggcgcagcaccagcgtgacggatccctgcccgcctgccgcttcttcgaggat
ttcgacacccatgggcgcgaggtgcccatcccctacggcatctacaacctggacgacctg
aaggcccacggccgccagaagggctggtgcccttatttcctcgcccgctactcgatcctc
cacgccaacatcgttgtctacagctaccactacctgctggaccccaaaatcgccgacctg
gtctccaaggagctggccaggaagtcagtcgtggtcttcgatgaggcccacaacattgac
aacgtttgcatcgactccatgggggtgaacatcacgcgccggacgctggaccgctgccag
gccaacgtggccacgcttcaggccaccatccaaaagatcaaggagacggacgcgcggcgg
ctggcagacgagtaccggcgcctggtggaggggctgcgggaggccagcatggcgcgggag
accgacctctaccttgccaaccccgtgctgccggacgagatcctgcaggaggcggttccc
ggcagcatccggacggccgagcatttcgtggggttcctgaagcggttcgtcgcctacttg
cgggcgcgggtgcgggggccgcgggtggtgcaggagagcccccccgccttcctcaaggac
ctctacgagaaggtctgcatcgagcgcaagcccctgcggttctgtgcagagcggctgcac
tcgctgctgcggacgctggagatcgtggacgtggccgacttctccgccatcaccctcgtc
gccaacttcgccaccctcgtcagcacctacgccaagggtttcaccatcatcatcgagccc
ttcgacgacaggacccccaccatcgccaaccccatcctgcacttcagctgcatggatgcc
tccatcgccatcaaacccgtcttcgagcgcttccagtcagtcatcatcacgtcagggact
ctctccccactggacatttaccccaaaatcctggatttccgccccgtcaccatggcgact
ttcaccatgacgctggcccggacctgcctgtgccccatgattgtgggtcgtggcaatgac
caggtggccatcagctccaagtttgagacacgcgaggacattgctgtcatccgcaactac
gggaacctgctgctggagctgtcggccgtggtccccgacggcatcgtcgccttcttcacc
agctaccagtacatggagaacatcgtggcctcctggtacgagcagggcatcctggagaac
atccagcggaacaagctcatcttcatcgagacccaggatggggctgagaccagcatggcc
ctggagaagtaccaggaggcctgcgagaatggccggggtgccatcctgctctctgtggcc
cgcggcaaagtgtcggaaggcatcgattttgtgcaccactacggcagagctgtcatcatg
ttcggggtgccctacgtctacacccagagccgcatcctgaaggcccggctggaatacctc
cgggaccagttccagatccgggagaatgatttcctcaccttcgatgccatgcgccacgcc
gcccagtgcgtcggccgggccctgcgcggcaaaaccgactacggcctcatggtcttcgcc
gacaagcgcttcgcccgggcggacaagcgggggaagctgccgcggtggatccaggagcac
atcaccgacgccaacctcaacctgacggtggacgaggcggtgcaggtggccaagttcttc
ctgcgccagatggctcagcccttccaccaggaggaccagctggggctgtccctgctgacg
ctggagcagctgcagtcggaggaggttctgcagcggattgagcagatcgctcagcaggtg
tga
DBGET
integrated database retrieval system
