Ciconia boyciana (Oriental stork): 140645493
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Entry
140645493 CDS
T10948
Symbol
HDAC6
Name
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
cboy Ciconia boyciana (Oriental stork)
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cboy01009
]
140645493 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cboy03019
]
140645493 (HDAC6)
04131 Membrane trafficking [BR:
cboy04131
]
140645493 (HDAC6)
03036 Chromosome and associated proteins [BR:
cboy03036
]
140645493 (HDAC6)
Enzymes [BR:
cboy01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
140645493 (HDAC6)
Protein phosphatases and associated proteins [BR:
cboy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
140645493 (HDAC6)
Messenger RNA biogenesis [BR:
cboy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
140645493 (HDAC6)
Membrane trafficking [BR:
cboy04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
140645493 (HDAC6)
Chromosome and associated proteins [BR:
cboy03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
140645493 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
GATA
DUF7573
Zn_Ribbon_TF
ArfGap
Motif
Other DBs
NCBI-GeneID:
140645493
NCBI-ProteinID:
XP_072705023
LinkDB
All DBs
Position
34:complement(698794..724637)
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AA seq
1195 aa
AA seq
DB search
PQDRNGARNGENGENSGFEPEIATFEAGNDDFGEPRWRLGAKERRKNPEVGPENAKFEPK
TQRPDLPTRRDPGLRVPPPSPPQTLGVLTPLPVLPTTADLTGPAAAPRGTPTSQPPMEFV
ALGGGPEGAPPFSDEAGAFLGLGGAEGLEPGAAVPPMPPLTAVPVPPGRLSLMPWAEGAL
GSPXGPPPPRSPRFLELLQPPGQPPGAPLXPAPPPCEARECVNCGATATPLWRRDGTGHY
LCNACGLYHRLNGHNRPLIRPKKRLLVSKRAGTVCSNCQTSTTTLWRRSPHGDPVCNACG
LYYKLHRVNRPLTMRKDGIQTRNRKVSAKGKKRRQGGGAGPGGVPDTMGRGPPAPSRTPT
TPSRGPGCALRPRTPRPLRTSSALPHRRTLFGGDRGGLRFPLDPCWPPPRPQPPALTGGG
GAPITVWYQKWSWAQMSLFGGPPCDAPPRAALEPRPPALMHPEGPEPLSAAWATLEELGL
VQRCVPVESRPATDEELLLVHRCLGPLWGGWGPPWRVLGSPAGVLGSPQTPGSPVGGVRS
PVGGFGAPCGGFGVPPDARVPRGGGGVPRGGFWGPPRGFGGPRRPGALQEPGRSRLAVGS
LLALLGKVLSGDLRNGLALLRPPGRHAQPEAASGPCAFNAVAIAARAAQRRLGVQRILIV
DWSAQPSQAIPRLFQDDPSVLCFGVHRGEDPPASVGTGRGEGFTVDLRWDKPGATDGDYA
AAFFHLLLPIAFEFQPQLVLVAAGFDAALGDLEGVSPDGFALMTHLLSALAGGRLILALE
EGLEPGGPGAVLRTLLGDPGDPPGPITPTPSGLASVARALAVHRKYWSCLRCAEPEVEEK
EEEEEEEEEEDEEDLEELEDDGDPPGTPPEPAEQEDLQPWPHPAARTGLLYDERMEEHCN
PWDSQHPETPQRVTRIVERLRELGLAQRCLRLPARYALPAQLRACHTRAHVAARGGTEGL
RPRELRGAAERYNSVFLCPRSYDCARLAAGTACAAVTAVLAGQVRNALAVVRPPGHHAGP
GAAGGFCLFNNVAVAARHGQRLAGGALRVLILDWDVHHGNGTQKIFEEDPSVLYVSLHRH
DGSFFPGGSGGSPRRRGRGRGTGFTLNVGWGGPRAGDPDYLAAVTRLVLPVACQFAPSWC
WCRRGSTRTGDPWGVPGVPPNLRPHDPPAGGWRGRLVLVLEGYRGAGFGVPGWGW
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
ccccaggaccgaaacggggccagaaacggtgaaaatggtgaaaatagcggttttgaaccc
gaaatcgccacgttcgaggctggaaatgatgattttggggagccaagatggcggctcggg
gccaaggagaggaggaaaaatcccgaggttgggcctgaaaatgccaaatttgagcccaaa
actcagcgtccggatcttcccacccgaagggacccaggcctccgggtgcccccaccctcg
cctccgcagaccctcggggtgctgacccccctccccgtgctccccacaactgcggacctc
acaggccccgctgctgccccccgggggaccccgacctcccagccccccatggagttcgtg
gcgttggggggggggccggagggggccccccctttttcggacgaggccggagctttcctg
gggctggggggagccgaagggctggagccgggggctgctgtgccccccatgccccccctc
accgctgtccccgtccccccaggccgcctctcgctgatgccgtgggccgagggggcgttg
gggagccccnctgggccgccgcccccccggagcccccgcttcctggagctgctgcagccc
cctgggcagcccccaggggcccccctgnccccggcgcccccgccctgcgaggcgcgggag
tgcgtgaactgcggggcgacggcgacgccgctgtggcggcgggacgggacgggccattac
ctctgcaacgcctgcgggctctaccaccgcctcaacggccacaaccggcccctcatccgc
cccaagaagcgcctgctggtgagcaagcgcgccggcaccgtctgcagcaactgccagacc
agcaccaccacgctctggcgacgcagcccccacggggaccccgtctgcaacgcctgcggc
ctctactacaaactgcaccgcgtgaaccgccccctgaccatgcgcaaggacgggatccag
acccgcaaccgcaaggtctcggccaaggggaagaagcggcggcagggggggggcgccggc
cccgggggggtgccggataccatggggcgggggccccctgccccctcccgcacccccaca
accccctcccgaggacccggctgcgctctacgccctcggacccctcgtcctctccggaca
tcttctgcccttccccaccgccgcaccctttttgggggggaccggggggggttacgcttc
cccctcgacccctgctggccccccccccggcctcagcccccagctctaactgggggaggg
ggggcccccattacagtttggtatcagaaatggagctgggctcagatgtcgttatttggg
gggcccccttgcgatgcccccccccgcgcggcgctagagccccgccccccggctctcatg
caccccgagggtccggagccgctgtcggccgcgtgggcgacgctggaggagctgggcttg
gtgcagcgctgcgtcccagtggagagccgcccggctaccgatgaggaactgctgctggtc
cacagatgcctgggtcccctgtggggggggtggggtcccccgtggcgggttttggggtcc
cccgcgggggttttggggtccccccagacgcctgggtcccccgtggggggggtgaggtcc
cccgtggggggttttggggccccctgtggaggttttggggtccccccagatgcccgggtc
ccccgtggggggggtggggtcccccgtggggggttttggggtcccccgcgggggtttggg
ggtccccgacgcccgggtgccctgcaggagccgggccgctcccgcctggccgtgggctcg
ctgctggcgctgctggggaaggtgctgagcggggacctgcgcaacgggctggcgctgctg
cgcccccccgggcgccacgcgcagccggaggcggcgagcggcccctgcgccttcaacgcc
gtcgccatcgcagcccgggcagcccagcggcgcctgggggtgcagcgcatcctcatcgtg
gactggagtgcccagcccagccaggccatcccccgcctcttccaggacgaccccagcgtc
ctgtgtttcggggtgcaccggggcgaggacccccccgcgtctgtcggcaccggccggggc
gagggcttcaccgtggacctgcgctgggataagcccggtgcgacggatggcgactacgcg
gccgccttcttccacctcctcctccccatcgccttcgagttccagccccagctcgtcctg
gtcgccgctggcttcgacgccgccctcggggacctggagggggtctcccccgacggcttt
gccctcatgacccacctgctgtcggcactggcggggggacgcctgatcctggccctcgag
gaggggttggagcccggggggcccggtgccgtcctgcgcacgctgctgggggaccccggg
gacccccccgggcccatcacccccacccccagcggcctggccagcgtggcccgcgccctg
gccgtccaccgcaagtactggagctgcctgcgctgcgccgagccggaggtagaggagaag
gaggaggaggaggaggaggaagaagaggaggatgaggaggatttggaggagctggaggat
gatggggaccctccagggacccccccggagccagcagagcaagaggacctccagccctgg
ccccatcccgctgcccgcacagggctgctgtacgatgagaggatggaagagcattgcaac
ccctgggacagccagcaccccgagacgccgcagcgggtgacgaggatcgtggagcggctg
agggagctgggcttggcgcaacgctgcctgcgcctgcccgcgcggtacgccctgcccgcc
cagctgcgcgcctgccacacgcgggcccacgtggcggcgcggggggggacggaggggctg
cggccccgggagctgcggggagcggccgagcgctacaactccgtcttcctctgcccccgc
tcctacgactgcgcccgcctggcggccggcaccgcctgcgccgccgtcaccgccgtcctc
gccgggcaggtgcggaacgcgctggcggtggtgcgtccccccgggcaccacgccgggccc
ggcgccgccggcggcttctgcctcttcaacaacgtggcggtggcggcgcggcacgggcag
cgcctggcggggggggccctcagggtgctgatcctggactgggacgttcaccacggcaac
ggcacccaaaagatcttcgaggaggaccccagcgtgctgtacgtctccctgcaccgccac
gacggctccttcttcccggggggctccggggggtccccgcggcggcgggggcgggggcgg
ggcaccggcttcaccctcaacgtgggctggggggggccccgcgccggggaccccgactac
ctggcggccgtgacgcgcctcgtcctgcccgtcgcctgccagttcgcccccagctggtgc
tggtgtcggcggggttcgacgcggacgggggacccctggggggtgcctggtgtcccccca
aaccttcggcctcatgacccacctgctgggggctggcgggggcgcctcgtcctcgtcctc
gaggggtatcggggggcgggatttggggtgccaggctgggggtggtga
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