Ciconia boyciana (Oriental stork): 140646338
Help
Entry
140646338 CDS
T10948
Symbol
PCDH9
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
140646338 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cboy01009
]
140646338 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cboy04515
]
140646338 (PCDH9)
Protein phosphatases and associated proteins [BR:
cboy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
140646338 (PCDH9)
Cell adhesion molecules [BR:
cboy04515
]
Cadherins
Protocadherins
140646338 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_FAT4_N
Ig_Cad99C_N
Ig_CLSTN
Cadherin_CELSR2_9th
Cadherin_2
RET_CLD1
Ig_TRS130_1st
MAP17
Rcr1-2
Big_9
V_ATPase_I
DUF6249
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
140646338
NCBI-ProteinID:
XP_072706205
LinkDB
All DBs
Position
1:178316591..179027682
Genome browser
AA seq
1161 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSTTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKESQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RFFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAK
VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPTPNDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKTAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGTAPPTTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSMKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQPQDEFYDQ
ASPDKRTEADGNSDPNSDGPLGPRGLAEATEMCTQECLVLGHSDNCWMPPSLGTYQQPKS
PLSTFAPQKEWVKKDKLVNGHTLTRTWKEDSNRNQFSDRKQYGSSEGHFNTGNHMTDIPL
ANLKSYKQASGGVESPKEHQL
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggaccttagggatttttacctgttggccgctttgattgcctgtttaaggctggattct
gctatagctcaagaacttatttacactattagagaagagctgcctgaaaatgtacccata
gggaacataccaaaggacctgaacatttctcacatcaatgctgccacggggaccagtgcc
agccttgtctacagactggtgtctaaagcaggggatgcccctctggtcaaagtgtcaagt
accaccggggaaatctttacgacatctaacagaatagacagagaaaaactctgtgctgga
gcttcctatgcagaagaaaatgagtgtttctttgaacttgaagtggtgattctccccaat
gacttttttaggctgatcaaaataaaaatcattgtaaaggatactaatgacaatgcacct
atgtttccatcccctgtcatcaatatctccatcccagaaaacactctgatcaacagtcgc
tttccaatcccatcagcaacagatcctgacacaggtttcaacggtgtgcagcactacgag
ttgttaaatggacagagtgtctttggactggatattgtagaaactccagaaggagagaaa
tggcctcagctgatcgtgcagcagaacttggacagagagcaaaaggacacctacgtgatg
aaaatcaaagtggaggatggaggtaccccccagaaatccagcacagccatcctgcaagtc
acagtaagtgatgtcaatgataacaggccagtgtttaaagagagtcaagtagaggttcat
ataccagagaatgcccctgtgggcacttctgtaattcagcttcatgctacagatgcagat
ataggaagcaatgcagaaatcagatatatttttggtgcccaagttgcccctgcaaccaaa
agattttttgctttaaacaataccacagggctgattacagttcagaggtccttagatcga
gaagagactgctattcacaaagtgacagtgctggctagtgatggtagctctacaccggct
cgggcaactgttaccatcaatgtcactgatgtaaacgataaccctcctaacatagacctc
aggtacataataagtcccatcaatggcacagtgtacttatctgagaaagatcccgtcaat
acaaagattgccctaattacggtttcagataaggacactgatgtgaacggcaaagtgatc
tgtttcattgagagagaggtccccttccacttgaaggcagtttacgacaaccagtatttg
ttagagacctcttccttgttggactatgagggcaccaaagaattcagctttaaaattgtt
gcttctgattctggcaagcccagtttgaaccagactgccctggtaagagttaaactggag
gatgaaaatgacaaccctccgattttcagccagcctgtaattgagctgtcagtttctgaa
aacaaccggcgtggtctatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggccctaatgcctcctttttcgatctggatcgaaag
acaggagttttgacagcctccagagtttttgacagagaagagcaggaacgtttcattttc
actgttacagcccgagacaatggcacccctcctttgcagagtcaagcagctgtaattgtt
actgttttggacgaaaatgacaacagtcccaaatttactcataatcacttccagtttttc
gtatcggagaacttaccaaagtatagcacagtgggggtgatcacagtgaccgatgcggat
gccggggaaaataaagcggtgaccctttccatcctgaatgacaatgaaaactttgtgctg
gatccatactctggagttataaagtccaatgtttcttttgatcgagaacagcagagctcc
tacacatttgatgttaaggcagtggatggagggcaacctcctcgctcttctacagcaaaa
gtaaccataaacgtcatggatgttaatgataacagccccgttgtcatctatccaccttct
aatacttcttttaagctagtgccactctcagcaattccaggatcggtggtagccgaagtc
tttgctgtggatatagacactggaatgaatgccgagcttaagtacacaattgtaagcgga
aataacaagggtttgtttcggattgatccagtgacaggtaatatcactctggaagaaaaa
ccaactcctaatgatgtggggctgcatcgcttagttgtcaacataagtgatttgggttat
cccaaatccctgcatactcttgtgcttgtatttttgtatgtaaatgatactgctggaaat
gcttcttatatttatgacttgatacgcaggactatggaaacacctttggaccggaacata
ggggacagtagccaaccctaccaaaacgaggactatctcacgatcatgatcgctattgtg
gcgggtgccatggttgtcatagtggtgatatttgtcacggttctcgttcgctgtcgacat
gcatccagattcaaaaccgcccagaggagcaagcaaggtgctgagtggatgtctcccaat
caggagaacaagcaaaacaagaaaaagaaaaggaagaaaaggaaatctccgaagagctct
cttttgaactttgtgaccattgaggagtccaaacctgatgatgcagttcatgaacctatc
aacgggacaataagccttccagcagagctggaggagcaaagtataggaagatttgactgg
ggcacagcaccaccaacaacctttaagcctaacagtcctgatcttgccaaacattacaaa
tctgcctctccacagtctgcttttcatctcaaacctgacactccagtttcaatgaaaaag
caccacgtgattcaggaactcccgttggacaacacctttgttggtggttgtgacaccctt
tccaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacagccgcaggacgaattctacgaccag
gcttcaccggacaagaggactgaagctgatggcaactccgaccccaactcggatgggcct
cttgggccacgagggttagctgaagctacggagatgtgtactcaagaatgcctggttttg
ggtcactcagacaactgttggatgcctcccagcttgggcacataccaacagccaaagtct
cctctctccacctttgcacctcagaaagaatgggttaagaaggacaaactagttaatgga
cacacattgaccaggacctggaaagaagatagcaacagaaatcagttcagtgaccgaaag
cagtatggttccagtgagggccatttcaacactggcaaccacatgactgacattcctctg
gccaacttgaagtcttataaacaggcctcaggaggtgttgagagtccaaaggagcatcag
ctataa
DBGET
integrated database retrieval system