Ciconia boyciana (Oriental stork): 140647173
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Entry
140647173 CDS
T10948
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
140647173 (SHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cboy01002
]
140647173 (SHH)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cboy00536
]
140647173 (SHH)
Peptidases and inhibitors [BR:
cboy01002
]
Cysteine peptidases
Family C46: hedgehog family
140647173 (SHH)
Glycosaminoglycan binding proteins [BR:
cboy00536
]
Heparan sulfate / Heparin
Morphogens
140647173 (SHH)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
140647173
NCBI-ProteinID:
XP_072707635
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Position
2:159455675..159465431
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AA seq
425 aa
AA seq
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MDEMLLLTRILLVGFICALLVSSGLTCGPGRGIGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSATVHLEQGGTKLVKDLSPGDRVLAADAEGRLLYSD
FLAFLDREDGSHKLFYVIETRQPQARLLLTAAHLLFVAPQHNQSQEGTPSSRALFASRVR
PGQWVYVLGEGGRQLLPAAVHSVSLREEASGAYAPLTAQGTILINRVLASCYAVIEEHSW
AHWAFAPFRLLQGMLASLCPSGGGAPVGAPAAPGIHWYSRLLYHIGSWVLGSDSLHPLGM
VVPSS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaatgctgctgttgacaagaattctcttggtgggcttcatctgcgctctttta
gtctcctctgggctgacttgtggaccaggcaggggcattggaaaaaggagacaccccaaa
aagctgacccctttagcctataagcagtttattcccaatgtggcagagaagaccctaggg
gccagtggaagatatgaagggaagatcacaagaaactccgagagatttaaagaactaacc
ccaaattacaatcctgacattatttttaaggatgaagagaacacgggagctgacagactg
atgactcagcgctgcaaggacaagctgaacgccctggccatctccgtgatgaaccagtgg
cccggggtgaagctgcgggtgaccgagggctgggacgaggacggccaccactccgaggag
tccctgcactacgagggccgcgccgtggacatcaccacctcggaccgggaccgcagcaag
tacggcatgctggcccgcctggccgtcgaggccggcttcgactgggtctactacgagtcc
aaggcgcatatccactgctccgtcaaagcagaaaactcggtggcggctaaatcggggggc
tgcttccctggctcggccacggtgcacctggagcaaggcggcaccaagctggtgaaggac
ctgagccccggggaccgggtgctggcggccgacgcggagggccggctgctctacagcgac
ttccttgccttcctcgaccgggaggacggctcccacaagctcttctacgtcatcgagaca
cggcagccccaggcccggctgttgctgacggctgcccacctcctcttcgtggccccccaa
cacaaccagtcgcaggaggggacccccagcagccgggcgctcttcgccagccgcgtacgg
ccgggccaatgggtctacgtgttgggcgagggcgggcggcagctcctgccagcggccgtg
cacagtgtctcattgcgggaggaggcttcgggggcgtacgccccactcactgcccagggc
accatcctcatcaaccgggtgctggcctcctgctacgccgtcatcgaggagcacagctgg
gcgcactgggcgttcgctcccttccgcctgctccaggggatgctggcctctctctgcccc
tctggcgggggggccccagtgggtgcccctgccgcccccggcatccactggtactctcgc
ctcctctaccacatcggcagctgggtgctgggtagtgactctctgcacccgctgggcatg
gtggtaccgtccagctga
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