Ciconia boyciana (Oriental stork): 140648033
Help
Entry
140648033 CDS
T10948
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
cboy Ciconia boyciana (Oriental stork)
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cboy03016
]
140648033 (CDKAL1)
Enzymes [BR:
cboy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
140648033 (CDKAL1)
Transfer RNA biogenesis [BR:
cboy03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
140648033 (CDKAL1)
Prokaryotic type
Methylthiotransferases
140648033 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-GeneID:
140648033
NCBI-ProteinID:
XP_072709471
LinkDB
All DBs
Position
2:101345051..101777626
Genome browser
AA seq
577 aa
AA seq
DB search
MPAACDSVLEDIEDIVSAEDLKPHDRQFVRKNVFPKVRKRNSQKNIQTDDDPPSDSIIPG
AQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITDSSAEADLWLLNSCTVKNPAEDHFRNS
IRKAQEGKKKVVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQK
KDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVDRA
KQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEAIPEGAMLRLGMTNPPYILEHL
EEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFKQVVDFLKEKVPGITIATDI
ICGFPGETDEDFQETMKLVEHYRFPSLFINQFYPRPGTPAAKMHQIPAAVKKQRTKDLSQ
LFHSYNPYDHKVGERQRVLVTEESFDSNYYVAHNPFYEQVLVPKDPLLMGKMVEVNIYEA
GKHFMKGQPVSDARVYTASITRPLAKGEVSGLTEEFRRAPQNGTNWKAQPSAEIPVKTPL
SSWMALQLPWQQEGGGLKILSVSLALLAVLVMFYYGE
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgcctgtgattcagtgcttgaagatattgaagatattgtgtcagcagaagat
ttgaaaccacatgatcggcagtttgtaagaaagaatgtttttccgaaagtgcgaaaacgc
aattcacaaaaaaatattcagacagatgatgatcccccaagtgacagcattattcctggt
gctcagaaaatctggattcgtacgtggggatgttctcacaataattcagatggtgaatat
atggctggacagctggctgcatatggatacaaaattacagacagctctgctgaagcagat
ttatggttgctgaacagttgtacagtaaaaaatcctgctgaggaccacttcagaaactca
atcaggaaagcccaagaagggaagaagaaagtggttctagcaggctgtgtgccacaagcc
caacctcgtcaggactacctgaaaggcttgagtattataggggttcagcagatagatcgt
gtagtagaagttgtggaggaaactattaaaggtcattctgtgagactgctgggtcagaaa
aaggataatggaaagcgtttggggggagcacgactggatttgccaaagattaggaagaat
ccactgatagaaatcatttccatcaatacagggtgtctcaatgcatgtacctactgcaaa
actaagcatgccagaggagatcttgcaagttatccaattgaagaactagtggacagagca
aaacagtcttttcaagagggtgtttgtgagatatggctgaccagtgaagacacaggggct
tatggcagagacattggcacagacctccctacgcttctgtggaagctggttgaagctatt
cctgagggagctatgctgaggcttggcatgacaaaccctccctatattttagagcatctg
gaggaaatggcaaagattctcaatcatccaagagtatatgcttttctgcacataccggtc
cagtcagcctctgacagtgtgctcatggacatgaaaagagaatactgcgtggcagacttc
aaacaagtagtggatttccttaaagaaaaagtgcctggaataacaattgctacagacatc
atatgtggttttccaggagagacagatgaagattttcaagaaacaatgaaacttgtagaa
cattacaggtttccgagcttgtttattaatcaattttacccacgcccaggaaccccggct
gcaaaaatgcatcaaattccagctgcagtgaaaaaacaaagaacaaaggatttgtcccag
ctgtttcattcatacaatccatatgaccataaggttggtgagaggcagagggttctggta
acagaagaatcctttgattccaattactatgttgctcacaatcctttctatgagcaggtt
cttgtgccaaaggatcctctgttaatgggtaagatggtagaagtgaatatttatgaagct
gggaaacattttatgaaggggcaaccagtgtcagatgccagggtttacactgcatccatc
accagaccattagcaaaaggagaagtttctggtttaacagaggagttcagacgtgcacca
cagaatggcacaaactggaaagcacagccttctgctgagatcccagtgaaaacaccactc
agctcgtggatggctttgcagctcccatggcaacaagaaggaggtggactgaagatactg
tctgtcagcctggctctactggcagttcttgttatgttttactacggtgaatga
DBGET
integrated database retrieval system
