Ciconia boyciana (Oriental stork): 140649212
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Entry
140649212 CDS
T10948
Symbol
SCAF8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
cboy Ciconia boyciana (Oriental stork)
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cboy03021
]
140649212 (SCAF8)
03041 Spliceosome [BR:
cboy03041
]
140649212 (SCAF8)
Transcription machinery [BR:
cboy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
140649212 (SCAF8)
Spliceosome [BR:
cboy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
140649212 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
140649212
NCBI-ProteinID:
XP_072712162
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All DBs
Position
3:complement(70602089..70773732)
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AA seq
1355 aa
AA seq
DB search
MEAVKAFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN
NVFKSEIIQPLLDMAAGIPPPVVTPVLPSTTAAMSNNTPGTPVTPVTPANVVQSLPDPWV
SQIANTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQPSLLQALDAGLVVQLQALTAQ
LTAAAAAANTLNPLEQSVSFNKKLMDRFDFGEESEQNEEPKKETPTSQLPLVPESVNNSL
FHQLAEQLQQQNLEHLRQQLLEQQQPQKASPEENQEGNFGSEHSASPSQGSSQQQFLEVE
TNVDDSMDIQQQDMDIDEGQDVAEEEIFEQEEKKSAVRSRSRTRSRSRSRSPRKRRSRSR
SGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTL
WVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAYRALQKLSSGSYKI
GSKIIKIAWALNKGVKTEYKQFWDVDLGVSYIPWEKVKLDDLEGFAEGGMIDQETVNTEW
ETARSSEAAKENVQTTQSAAVDKSTVITTQTEAYTQPVTMLQIPVAPAVPAVSLVPPAFP
VTMSVPPPGYSAIPPPPFLRASFNPSQPPPGYMPPPVPPVVPPPVVPPPVVPPVVPTPLV
QPPLPIAQETMKDVPFTSLVLPVGTVTSNLATPTLSAGNVFNPLPINKPESDEKGSHLAD
LQISSSENNRSVQSDVSSSSGLGGVQPPSVSSSSGLTGEGQPPSVSSSSGLAGGVQPPSV
SSSSGLVGVQPPTVSSSSGLAGGVQLPSVSSSSSLAGGVQPTSVSSSSGLMAGVQPPNVS
SSSGLLAGVHPPSVSSSPGLLTGMQPPNVSSSSGVLAGVQPPSVSSNSGLLIMPPPNVSS
SSGLMGVPPPNISSSSGLMAMQHPAGVQNMPHLNISSQRMPGMPLIDIRPGLMPHSPGPR
FPLMQPGMPPQRSIPPPAILDPSLHPPPRGPFPPGDIFNQTERPFGTPGRQNIDSISNPE
KRLPLGGDNIQQEGDRDYRFPPVENRDNLNRPSPVDVRDSVGRPPVDPREGIGRPPVDGR
EHFARPHVDMRENFGRPGIDNLGRREHFGFNSDKHWGQRGDYDEREHHAFPIYGGPKGFH
EDRERFRHVNYRFDSRSGPNWNRGFEQDAHRDFDDRRRPWERQRDRDDRDFNFCREINGN
RFGRDRMSNNWIPPPHPRVFEYFDGATSQRKADNMPQVNGENTETESQPPTAQVQDDPEL
YEKLTSSVEINKEKSDTEADIESEPVVESTETEGT
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgaaagcctttaacagcgagttgtactcgctaaatgattataagccacct
atttctaaagctaaaatgacacagatcaccaaggcagcaatcaaggctataaagttctac
aagcacgttgtacagagtgttgagaaattcattcaaaagtgcaaaccagaatacaaggta
cctggtctgtatgtcattgactccattgtaagacagtcccggcatcagtttgggcaagaa
aaggatgtatttgctccaagattcagcaataacatcatcagcactttccagaacttgtac
cgttgtcctggggatgacaagagtaaaattgttagagtgctaaatttatggcagaagaat
aatgtgttcaagagtgaaattattcagcctctcttggatatggcagcaggaattcctcct
ccagttgtgacccctgtcttgcccagcactacagctgctatgagcaacaatacaccagga
acacctgtgactccagttactccagccaatgtggtgcagagtttacctgatccttgggta
tctcagatcgctaatacggatacccttgctgctgttgcacagattttacagagtcctcaa
ggccaacagcttcagcagttgatacagacactgcagatacagcagcagaaacctcagcct
tcactacttcaagccctggatgctggtcttgtcgttcagttacaggccctcacagcacaa
cttacagctgcagctgctgctgctaacacacttaatccactggaacagagtgtctctttt
aataagaagctgatggacaggtttgactttggagaagaatctgaacaaaacgaagagcct
aaaaaggaaactcccacttcccaactgcctttagtaccagaatctgtgaacaactcgctt
tttcaccaactagctgaacagctacagcagcaaaatttagaacatctcagacagcagctt
ctggagcaacagcagcctcaaaaggcaagccctgaggagaatcaagaaggaaattttggt
tcagagcactctgcctcaccatcacaagggagtagtcagcagcagtttttagaagtggaa
acaaatgtagatgattcaatggatattcaacaacaggacatggatatagatgaaggacag
gatgttgctgaagaagagatttttgaacaagaagagaagaaatcagctgttcgttcaaga
tcaagaactcgttcaagatctcgttcaaggtcaccaagaaaacgaaggtctagatcacgg
tcaggctctcgtaagcgtaaacacagaaaacgttcacggtcaagatcaagagaaaggaag
agaaagtcatctcggtcatattccagtgaaagaagggctagggaaagggaaaaagaacgt
cagaaaaagggattgcctcctatacggtcaaaaacactaagtgtttgcagtactactctt
tgggtaggtcaagtagacaagaaggctacacagcaagatttaactaacttgtttgaagaa
tttggacaaatagagtctattaatatgattcccccaagaggttgtgcttatgtctgtatg
gttcatagacaagatgcgtatcgtgctcttcagaaacttagttctgggtcctataaaatt
gggtctaaaattattaagattgcctgggctttgaataaaggtgtgaaaacagaatacaag
caattctgggatgtggatctgggagtttcatatattccttgggagaaagtaaaattggat
gatttggagggctttgctgaaggtggcatgattgaccaggagacagtgaatacagaatgg
gaaacagccagaagctcagaagctgctaaagaaaatgttcaaactacgcagagtgctgca
gttgataagagtacagttattacaacgcagacagaagcttacacacaaccagtcactatg
ctgcagattccagtagctccagctgtgcctgccgttagtttggttccacctgcgtttcct
gtcacaatgtctgtccctcctcctggttatagcgcaattcctcctccacccttcttgcga
gcaagtttcaacccttcacagccacctccaggttatatgcctcccccagttccacctgtg
gtcccaccacctgttgtcccgccacctgttgtcccaccagttgttccaacacctttagta
cagcctccattaccaattgcacaagagacaatgaaggatgttccttttactagccttgtt
ctaccagttggcacagttactagcaatctagctactccaacattatctgctggaaacgtt
tttaatcctctgccaatcaataaaccagaatcagatgaaaagggatcgcatcttgcagac
cttcagatttcctccagtgaaaacaatagatctgtgcaaagtgatgtctcgagtagctct
ggacttggaggagtgcagccacccagcgtctcaagcagttctgggcttactggagaaggg
caaccacccagtgtctcaagtagctctggacttgcagggggagtacagccacccagtgtt
tcaagcagctctggacttgtaggagtgcaaccaccaactgtttcaagcagttctggtctt
gcaggaggagtgcagctacctagtgtctccagtagctcttctcttgctggcggagttcag
ccaaccagtgtctcgagtagctctggacttatggctggagtgcaaccaccaaatgtctca
agtagctcagggctcctagctggagtgcatccacccagtgtctcaagcagccctggcctt
ctgacaggaatgcaaccacccaatgtctcaagcagctcaggagttctggcaggagtacag
ccaccgagtgtctcaagcaactctgggcttctcataatgccaccacccaatgtttcaagt
agttctggacttatgggagtgccaccaccaaatatttcaagtagttctggacttatggca
atgcagcatccagctggggttcaaaacatgcctcatttaaatattagtagtcaaaggatg
ccgggaatgcctctcatagatatccgtccaggcctaatgccccattcgcctgggccaagg
tttccattaatgcagccaggaatgccaccacagcgtagtattcctcctccagcaatcctt
gatccatctcttcacccaccccctcgaggtccttttcctccaggagatatttttaatcaa
acagaaagaccttttggaacaccaggaagacaaaatattgatagcatttctaatccagag
aaaagactaccacttggaggcgataacattcagcaggaaggagacagagattatcgcttt
cctccagtggaaaacagagataatcttaacagaccatctccagtggatgtcagagattct
gttggacgaccaccagttgatccaagagagggtataggaaggcctccagtagatggaaga
gaacactttgcaagaccacatgtagacatgagagaaaattttggaagaccaggtatagat
aaccttggtcgaagagagcattttggtttcaattcagacaagcactggggacagagagga
gattatgatgaaagagagcaccatgccttccctatttatggtggccctaaaggcttccat
gaagacagagagaggtttcggcatgtaaactataggtttgatagtagaagtggtcccaac
tggaatagaggatttgaacaagatgctcacagagatttcgatgaccgtagaagaccctgg
gaaagacagagggatagggatgacagagattttaatttttgcagagaaattaatgggaac
aggtttggaagagacagaatgtcaaacaactggatcccccctccacatccacgggttttt
gaatattttgatggggccacttcccaacgcaaagccgataatatgccccaggtaaacggt
gaaaatacagagacagaaagtcagccaccaactgcacaggtgcaggatgatccagaactt
tatgaaaaactgacatcttccgtcgagataaacaaagagaagagtgacacagaagctgat
atagaaagtgaaccagtggtagaaagcacagaaactgaggggacataa
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