Ciconia boyciana (Oriental stork): 140649249
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Entry
140649249 CDS
T10948
Symbol
SHPRH
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH isoform X1
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
cboy Ciconia boyciana (Oriental stork)
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cboy04121
]
140649249 (SHPRH)
Enzymes [BR:
cboy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140649249 (SHPRH)
Ubiquitin system [BR:
cboy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140649249 (SHPRH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Linker_histone
Helicase_C
zf-RING_UBOX
PHD
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
PEP-utilisers_N
TPR_12
TPR_10
TPR_2
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
140649249
NCBI-ProteinID:
XP_072712270
LinkDB
All DBs
Position
3:74970922..75030687
Genome browser
AA seq
1696 aa
AA seq
DB search
MSGRRKRAPPSKIDEEKKKKLCWNMHEDRRNEMITLDDEITNEDHVPGPSTSSTSFIVIN
DDSTDEDLIQKEGSGSKSVKFLTVNDEDDSYTILTPVAVQLNIMVLPYRADGSWKALLGE
FALHLPSEQILTDEFHERSFTLMRGDSDDQLQVCVHERSEDEYSNETKEYLGAYEQRILV
EPTLGGEILEGLRWLQKKKIIGLYQRPGEAQTLKVGIYLLEAGLSKPEFLSDGGGRPKKA
NHLIQKLMEKFYSFLIPDELEEDEEESDTELERQNIEELYDFVRHTHQQDIQLLREDVQH
PALIPILRPYQSEAVNWMLHRENLTSTPNSENTLHFLWREVITLDGVKIYYNPFTGCIIR
EYPNAGPQWPGGILADEMGLGKTVEVLALILTHTRPDIKQDDLILPEGKLVNFFVPPQPL
EGNKKKKPKEMELKLKEKIQYPSLRVMILAAVKEMNVKKGASIIAIFKYISAIYRYDIQR
NRRLLKRTLEKLIAEQVVEQVKGHGLAGSFKLGKNYKEQKRRERTKEQVARTSESIQKKQ
LIDAKTQIKESRNSDVTSENVLKTPLQVDITMEEHDYCTTSKNNRKSEADHENSVKENNV
QQEAVVPKSPDLHGSLVSSDISSDPNFDVSKTTADVHQETPKDQSSHSQEHAGSSVQHTG
SVFPFNTSEYRFECICGELGLADYKARVQCLKCYLWQHAECVNYKEENLKIKPFYCPHCL
VAMKPVSTGATLIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKHGFLQPHMLAEQEV
VITTYDVLRTELNYVDIPHSNSEDGRRFRNQKRYMAIPSPLVAVEWWRICLDEAQMVECT
TAKAAEMALRLSGINRWCVSGTPVQRGLEDLYGLVLFLGVDPYWVKHWWDQLLYRPYCRK
NPRPLYSLIAKIMWRSAKKDVIDQIQIPPQTENVHWLHFSPVERHFYHRQHEVCCQDALA
KLRKISDWTLKLSSLDRRTVTSILYPLLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTS
LQKKCRTECEEAHRQLVCALNGLAGIHIIKGEYALAAELYREVLRSSEEHKEKLKTDSLQ
RLHSTHNLMELLLAKHPGIPPTLRDSRLAEEAEQLRQHYMSKSNAEVAEAHQALQPVLQT
IRELQRKIHSGSPWWLDVIQTAIQYAIDEELVQRVQNEITSNYKQQINKLSMAEKFRDCR
GLQYLLTTQLEEVKKFQKIVREAVKNLEGPPSKQVIEAATICHLRPVRLPLNNCVFCKAD
ELFTEYESKLFSHTVKGQMAIFEEMIEDEEGLVDDRLPTTSRGLWATSETERALKAILSF
AKAHRMDVKLTEEGSIFLELFEAWKKEYKLLHEYWMVLRDHVSAIDELAMATERLRVRHP
DEPKPNPPVLHIIEPHEVEQNRVKLLNDKAVAKSQLQKKLGQLLYLTNLEKSQDKTTGGV
NPEPCPICARQLGKQWAVLTCGHCFCNECIAIIIEQYSVGTRRSSIKCAICRQTTSHKEI
SYVFTAETANQEDDIPVKGSHSTKVEAVVRTLKRIQFKDPGAKSLVFSTWQDVLDIISKA
LYDNNMIFSQINGISKFQENLSAFKYDPNINILLLPLHTGSNGLNIIEATHVLLVEPILN
PAHELQAIGRVHRIGQTKSTIVHRFLIKATIEERMQTMLKTVDRSHTSSSMKQSEASVLT
VADLADLFTEETEELE
NT seq
5091 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtcgtcgaaaacgtgcacctccatcaaaaatagatgaggagaagaagaaaaag
ctctgctggaatatgcatgaagaccggagaaatgagatgataacattagatgatgaaatt
actaatgaggaccatgttccaggtccaagcacttcttctacatccttcattgttataaat
gatgatagcactgatgaagatctcattcaaaaagaaggcagtggctcaaaatctgttaaa
tttttgacagttaatgatgaagacgactcttacaccatcttgactcctgtggcagtacag
ctaaatattatggtcttgccataccgtgcagatgggtcctggaaagctttgttgggagaa
tttgctcttcatcttccttctgagcaaattctaactgatgaattccatgaaaggagcttt
actttgatgagaggagactctgatgatcagctgcaggtctgtgttcatgaaagaagtgaa
gatgagtacagtaatgaaacaaaagaatacctgggtgcttatgaacaacgtattttggtg
gaaccaactttaggtggtgaaatattggaaggcttgagatggttgcaaaagaaaaagata
attggactttatcaaagacctggagaggctcaaactttaaaggttggaatttaccttctg
gaagctgggctgagtaaaccagagtttctcagtgatggaggtggaagacccaaaaaagct
aatcatctgattcaaaaactcatggaaaagttctatagttttttaattccagatgagctg
gaggaagatgaggaagaatctgacacggaactagagcgacaaaatattgaagagctttat
gactttgtaaggcacacccatcagcaggatatccagttactgagagaggatgtgcagcat
cctgcattaattcctattctgaggccataccaaagtgaggctgtgaactggatgcttcac
cgagagaacctcacaagcactccaaacagtgaaaacacactgcactttttatggcgggag
gtcatcactctggatggagtaaaaatctactataatccatttactggctgtattatccgt
gaatatccgaatgctggaccccagtggcctggaggtattttggcagatgagatgggtctt
ggaaaaacagtagaagtgttggctcttattctgactcatacccgaccagacattaaacaa
gatgatctgatattacctgagggtaagctcgtgaacttctttgttccacctcaaccttta
gaaggaaataaaaagaaaaaaccaaaggaaatggaacttaaattgaaggaaaaaatacaa
tatcccagtttacgagtgatgatattagcagctgtaaaggaaatgaatgtgaagaaagga
gcatccattattgcaatatttaagtacatcagtgctatatataggtatgacatacagaga
aacagacggcttctcaaaagaactttagaaaaactaattgcagaacaagtagtagagcaa
gtcaaaggacatggtctggctgggtctttcaagctgggaaagaattacaaggaacagaag
aggcgagaaagaaccaaagagcaggtagcaaggacttcagaaagcattcagaagaagcag
ttgattgatgctaaaactcaaatcaaagaatcgagaaatagtgatgtcacttctgaaaat
gtccttaaaacccctttacaggtggatatcaccatggaagaacatgattattgtacaact
agcaaaaataacaggaaatctgaagcagatcatgagaactctgtaaaagagaataatgtt
cagcaggaagctgtggtcccaaagtctcctgatttgcatggcagccttgtctccagtgac
attagcagtgatcccaattttgatgtttctaaaactacagctgatgtccatcaggaaacc
ccaaaggaccagtcctcacattcccaagaacatgctggcagtagcgtacaacatactggt
tctgtatttccctttaatacctctgaatatcgttttgaatgcatctgtggtgagcttgga
ttggctgactataaagctcgtgtgcagtgcctgaaatgttacttatggcagcatgcagaa
tgtgtaaactacaaagaggaaaacctgaagatcaagccattctactgtccccattgcctt
gtggcaatgaaaccagtttccacaggagcaactctgataatttctccaagttctatttgt
catcagtgggtagatgagatcaacaggcatgtaagatcatcttctcttcgagttctggtg
tatcaaggtgtgaagaagcatggctttttgcagccacacatgttggcagagcaggaggta
gttatcaccacatatgatgtcctccgcactgaactgaactatgtagatatacctcacagt
aacagcgaagatggacgccgtttcaggaaccagaagcggtacatggccatcccaagcccc
ttagtagcagtggagtggtggaggatctgccttgatgaagcacaaatggttgaatgcact
actgcaaaggctgctgaaatggcactccgtttaagtggaatcaatcgctggtgtgtcagt
ggcactcctgtgcagcgaggattagaagatctgtacggattagtcctttttcttggtgtt
gatccttactgggtcaaacattggtgggaccaacttttatatcgaccttattgtaggaaa
aatccccggcctctctacagtctaattgccaagataatgtggagatcagcaaagaaggat
gtgattgaccaaattcaaatcccccctcagacagaaaatgtacactggcttcacttttct
cctgtggagagacacttctatcaccgccagcacgaggtgtgctgccaggatgcattggca
aaactcaggaagatttcagactggactcttaagcttagtagcctagatagaaggactgtg
acttctattctgtaccctttgctgcggctgaggcaggcctgctgtcatccacaagctgtt
cggggagagttcttgccattacagaaaagcaccatgaccatggaggaactgctaacatct
ctgcagaagaagtgtcgaacagagtgtgaggaagctcaccgacagttggtgtgtgctctt
aatggcttagctggtatccatatcattaaaggagaatatgcattggctgcagagctgtac
agagaagtgttacgatcatctgaagagcacaaagaaaagctcaaaacagattccttgcaa
agacttcattctacacacaatttgatggaattgctgttggcaaagcacccaggaattccc
ccgactttgcgtgatagccgacttgcagaagaggcagaacaacttcgacagcattatatg
agtaaatccaatgcagaagttgcagaagcccatcaggccttacagccagttcttcagacc
attcgggagctccaaagaaagatacattcaggttctccttggtggttggatgtcatccag
acagcaatacagtatgccatcgatgaggagcttgttcagcgtgtgcaaaatgaaataacc
agcaactacaaacagcaaattaataaactctccatggcagagaaattccgtgactgcaga
ggccttcaatacctgctcacaacccagctggaggaagtgaagaagttccagaagattgtg
agagaagcggtgaaaaacttagaaggccctccctctaagcaggttattgaggctgccact
atctgccatttgcgacctgttagacttccacttaacaactgtgtcttttgtaaggctgat
gagttgttcacagaatacgagtcgaagctcttttctcatactgttaaaggccaaatggca
atatttgaagagatgatagaagatgaagaagggcttgttgatgaccgtttgcccaccaca
agtagaggactctgggcgaccagtgaaactgaacgtgccttgaaagctattctctccttt
gccaaagctcaccgaatggacgttaagctaaccgaagaaggcagcatatttctggaactc
tttgaagcgtggaaaaaggaatataagttacttcatgaatattggatggtactgagggat
cacgtgtctgctattgatgaactggcaatggctacagaacggctgagagtgcgtcatcct
gatgagccaaaaccaaatccaccagttctccacatcatagaaccgcatgaggtagagcaa
aatcgagtgaaacttttgaatgacaaggcagttgccaaatcacagcttcaaaagaaatta
ggacaacttctgtatctcactaatctggagaaatctcaggacaaaactactgggggagtt
aacccagaaccatgtccgatatgtgcacgtcaactgggaaaacagtgggcagtgctgaca
tgtggacattgtttttgtaatgagtgtatagctatcatcatagaacagtacagcgttggc
acccgccggagctcaattaaatgtgccatttgcaggcagacaacatctcataaagaaata
tcatatgtcttcactgcagaaactgcaaatcaggaggatgatattcctgtaaagggaagt
cactccaccaaagtggaagctgtggtccgaacactgaagagaattcaatttaaagatcca
ggggctaaatccttagttttctcaacgtggcaagatgtgttggacataatttcaaaagct
ttgtatgacaacaacatgattttttctcagatcaatggaattagtaaatttcaggaaaat
ctatctgcatttaaatatgatcccaacatcaatattttgctgctgcctcttcacactggt
tccaatggactaaacatcatcgaagcaactcacgttctgcttgtggaacccattctgaat
cctgcacatgagctacaggctattggcagagtacatcgtattggccaaacaaaatctacc
attgttcataggttcctgataaaagcaacaatagaagagagaatgcagactatgttgaaa
actgtagatagaagccacacgagctcttccatgaaacagtcagaagcctcagttctgaca
gtggcagatttggctgacctttttacagaggaaactgaagaacttgagtaa
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integrated database retrieval system
