Ciconia boyciana (Oriental stork): 140649262
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Entry
140649262 CDS
T10948
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1 isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140649262 (PNLDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cboy03019
]
140649262 (PNLDC1)
Enzymes [BR:
cboy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
140649262 (PNLDC1)
Messenger RNA biogenesis [BR:
cboy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
140649262 (PNLDC1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
B9-C2
Motif
Other DBs
NCBI-GeneID:
140649262
NCBI-ProteinID:
XP_072712299
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All DBs
Position
3:76200375..76212519
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AA seq
531 aa
AA seq
DB search
MELGAEGFQRRLPRLRGRVRRAAFLALDMEFTGLHSTFPQNNEPSLFDSPAERYLKARQS
VQRFTVPQLGLAIFSNENSNKYVVHSYNFFLFPSTLGVTDVEFTLSASSIQFLSHYGFDY
NKFLKDGIPYMNKVQEKILSQHVLAGSWKVSSALDRDVLKKAIDEVTCWIAAAEEEETMI
LQDLSDYQIFEVQLVLRQALQNAWTQPLGDKKVMVKKVSPQHRQLLENSPYDYCQKELIL
LSARGFTNLFQTLVKAKKPLVGHNMLMDLMHLHDKFYKPLPESYEEFKRNIHNLFPVLID
TKTVTKSIWKKCPFPRVSNLLEVYEVLCSNLNPKDPACPVITLASDCSRYAEKKSPHEAG
YDAFLCGSVLLKSAHLLLCRSTDDAVEADPSFSQYLTVLAEYLNKVNFIRGGVSSINFSG
EDAPCQHPPLLVVRVRGWPGLNERQIYQEFKALCRFDVRRLSKNQFILLSNKFKHVRRVL
RDYKHHPHLQISVYRHWRHSPRVNCVLQVSGIVALWSLLAFVLGGAPCYSF
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggagctgggggcggagggcttccagcggcgcctgccgcgcctgcggggccgcgtccgc
cgcgccgccttcctggcccttgatatggagtttactggcttacattcaactttcccacaa
aataacgagcccagcctgtttgattcccctgcggagcggtacctgaaggccaggcagagc
gttcagcgcttcactgttcctcagcttgggctggcaatattctcaaatgaaaattcaaac
aagtatgtggtgcattcatacaatttttttctctttccctcaacattgggagttacggat
gtcgaattcaccctctctgcatctagcattcagttcctgtctcattatggctttgactat
aataagttcctcaaagatggaatcccgtacatgaataaggtacaggagaagatccttagc
cagcatgtcttagcgggtagctggaaggtcagcagtgccctggacagggatgtgctgaag
aaggctattgatgaagtgacctgttggatagctgcagcagaggaagaggagactatgatt
ctgcaggatctgagtgactatcagatatttgaagttcagctggttctgagacaggctctc
caaaatgcttggacacagcctcttggagacaagaaggtaatggtgaaaaaagtgagtcca
cagcatcgtcagcttctggagaactctccttatgactactgccagaaggagctgattctc
ctgtctgcccggggcttcaccaacctcttccagacacttgttaaagccaagaagcccctg
gtgggacacaacatgcttatggaccttatgcatcttcatgacaagttctacaagcccctt
ccagaaagctatgaggagtttaaaaggaacattcacaacctgtttcctgtgctaatagac
accaagactgtaacaaaatccatctggaagaaatgtccgtttcctcgagtttctaatctt
ttggaggtgtatgaggttttgtgcagcaacctaaatcccaaagatccagcatgcccagtg
ataactcttgcaagtgactgctcaagatacgctgagaagaaatctcctcacgaggcaggc
tatgatgcatttctctgtggttcagttcttctgaagtcagctcatttgctactgtgcaga
tccacagatgatgcagtggaggctgatccttctttctctcagtatctcaccgtgttagcc
gagtatctgaacaaagtgaatttcatccgaggtggtgtttcaagcattaatttttctggg
gaagatgctccctgccaacatccccctctcttggttgtccgtgtccgaggctggccaggg
ctgaatgaaaggcagatttaccaagagtttaaagctctttgtcgctttgatgtcagacgg
ctttcaaagaaccagttcattctgctctccaacaaatttaagcacgtcaggcgtgttctg
cgagattataagcatcaccctcatctgcagatttccgtctatcgccactggaggcactct
ccacgcgtgaactgcgtgctgcaagtctctggtattgtggcactgtggtctctcttggct
tttgtactcgggggagctccttgctattcattctag
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