Ciconia boyciana (Oriental stork): 140649318
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Entry
140649318 CDS
T10948
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
140649318 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cboy03021
]
140649318 (TAF5L)
03036 Chromosome and associated proteins [BR:
cboy03036
]
140649318 (TAF5L)
Transcription machinery [BR:
cboy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
140649318 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
140649318 (TAF5L)
Chromosome and associated proteins [BR:
cboy03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
140649318 (TAF5L)
STAGA complex
140649318 (TAF5L)
TFTC complex
140649318 (TAF5L)
SAGA complex
140649318 (TAF5L)
SLIK complex
140649318 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
TFIID_NTD2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_Vps41
WD40_RFWD3
PEP5_VPS11_N
PROPPIN
Ge1_WD40
WD_LRWD1
eIF2A
Nbas_N
Motif
Other DBs
NCBI-GeneID:
140649318
NCBI-ProteinID:
XP_072712427
LinkDB
All DBs
Position
3:82570085..82592132
Genome browser
AA seq
603 aa
AA seq
DB search
MKRVRTEQIQMAVSCYLKRRQYVDSEGPLKQGLRLCQTAEEMAANLTVQSESGCANVVSA
APCLAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNMVQNGLKSTVDSFY
SRFHGMFLQNASQKDIIEQLQTTMTIQDILSNLKLRAFLDNKYVIRLQEDSYNYLLRYLQ
SDNNNALCKVLTLHIHLDVQPAKRTDYQLYAGGSSSRNESNGLEPSDMPASILQNEAALD
LLQDSIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPNSKLLAAGFDNSCVKLWSLRSR
KLKSEPHLVDVSRIRLACDILDEEVWIPFFSPPTLSAKEEEDDSAGTEMKILRGHCGPVY
STRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDISPCSLYFASGSHDR
TARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTG
HRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIA
SASMDNSVRVWDIRNTYCNAPADGSSSELVGVYTGQMNNVLSVQFMACNLLLVTGVAQEN
QEH
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgtacgcacagaacagattcagatggcagtgtcctgctacctcaagcgccgt
cagtatgtggactcggaaggtcccctaaaacaagggctgaggctgtgtcagactgctgaa
gagatggcagctaatctcacagtccaatctgaatctggttgtgccaacgttgtgtctgca
gctccctgcctggcggagccacagcaatatgaagtacaatttggacgattacgcaatttt
ctcacagattcagattctcagcacagccatgaagtgatgcctcttctgtatcccctcttt
gtctacctccatctgaacatggtccagaatggcctaaaaagcacagtggacagtttttac
agccgcttccatggcatgttcttgcagaatgccagccagaaggatatcattgagcagttg
cagactaccatgactattcaagatatcctgtccaacttgaagctccgggcttttctggac
aacaagtatgtcatccgccttcaagaggacagctacaactaccttcttcgctacctccaa
agtgacaacaacaacgctctgtgcaaagtcctgaccttgcacattcacctggatgtgcag
cctgccaagaggactgactaccagctctacgctggtgggagctcctcacgcaacgagagc
aacggcctggagcccagcgacatgcctgcttccattctgcagaacgaggcggcgctggat
ttactgcaggacagcattaaacgtgtcaaggacgggcccccttccttaacgaccatctgt
ttctatgccttctataacacggagcagttgctgaacactgcagagatttcaccaaatagc
aagctgcttgctgctgggtttgataattcgtgtgtgaagctgtggagcctgcgttccagg
aagttaaaatctgagccccacctcgttgatgtgtcccgtatccgcctggcttgtgacatc
ctggatgaggaggtctggataccctttttttccccccccaccctttctgccaaggaggaa
gaggacgacagcgcaggcacagaaatgaagatcctgagaggacactgtggacctgtgtat
agcacaaggttcctttcagacagttcgggactcttatcttgttccgaggacatgtccatc
agatactgggacctcagaagttttacaaacactgtgttgtaccaaggacatgcctatcct
gtctgggatttggatattagcccctgcagcctgtactttgccagtggttcccatgatcgc
actgcaaggctctggtcatttgatcggacgtacccgctgcgaatatacgcaggccatttg
gcggacgtagactgtgtcaagttccaccccaattccaactacttagcgacgggctccacg
gacaaaactgtacgcttgtggagcactcagcaaggcaactcagtgcgtcttttcacgggg
caccgtggccctgtgctagcacttgcattttctcccaatggtaagtacctggcatcagca
ggtgaagaccagcggctaaagctgtgggacttggcatcaggaactctttacaaagaactg
agagggcacacggacaacataaccagccttacttttagccctgacagtagtttaattgct
tcagcgtcgatggacaattcagtccgggtctgggacattcggaacacttactgcaacgcc
cctgcagatgggtcttccagtgaactggttggtgtatataccggacaaatgaataatgta
ctgagcgtacagtttatggcctgtaatcttcttctagtgactggagttgcacaagaaaat
caggaacattaa
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integrated database retrieval system
