Ciconia boyciana (Oriental stork): 140649625
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Entry
140649625 CDS
T10948
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
140649625 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cboy03400
]
140649625 (MSH2)
DNA repair and recombination proteins [BR:
cboy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
140649625 (MSH2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
140649625
NCBI-ProteinID:
XP_072713199
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Position
3:110984443..111049514
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AA seq
936 aa
AA seq
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MAVEPPREAVWPEGAGAEAGFVRAVLSLPEKPDTTVRFFERGDYYTVHGADARLAARELF
RTRAVIRQLAGAPGTQKLESVVLSKMNFESFVRDLLLVRHYRVEVYKNKAGSKSTKENDW
YLAYKGSPGNLAQFEEVLFANNDMSTAIGVVGVKLSTTDGQRVVGVGYVDTTLRKLSVCE
FPDNDQFSNLEALLVQLGPKECVLPGGETAGEMGKLRQVVQRGGILITDRKKADFTTKDI
VQDLNRLLKSKKEEQMNSAALPEMEKQVAVSSLSAIIKFLELLSDESNFGQFELTTFDLS
QYMVLDNAAVQALNLFQSSVENANTAQSLAGLLNKCRTPQGQRLVNQWIKQPLMDKNRIE
ERLNLVEAFVVDPELRQCLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRMYQAINQLPNV
VQALEKHEGAHQMLLLAVFITPLNDIYSDFSKFLEMIETTLDMDKVENHEFLVKASFDPN
LTELREKMNELEEKMQSFLKSAAKELGLEAGKSIKLETNSQFGHHFRITCKEEKVLRNNS
KYGIVDTQKNGVKFTNSKLSSVNDEYIKNREEYEEAQDAIVKEIINIASGYAEPIQTMND
VIAQLDAIVSFAHVSNGAPVPYVRPVILEKGQGRIVLKGARHPCIEVQDEVAFIPNDITF
EKGKQMFHIITGPNMGGKSTYIRQTGVIVLMAQTGCFVPCDSAEITIVDCILARVGAGDS
QLKGVSTFMAEMLETASILRTASENSLIIIDELGRGTSTYDGFGLAWAISEYIASKICAF
CMFATHFHELTALADQVPTVNNLHVTALTSDDTLTMLYRVKEGVCDQSFGIHVAELAAFP
KHVIESAREKALELEEFQNIGKSKESEGEPPAKKFFREREEGEKIIQDFLCQVKALPLTG
MSEEDIKIKLKQLRDDVLAKNNSFVNEIISRTKVTS
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagccgccgcgggaggcggtgtggccggagggcgcgggggccgaggcgggc
ttcgtgcgcgccgtgctctcgctgcccgagaagcctgacaccaccgtgcgcttcttcgag
cgcggcgactactacacggtgcacggcgcggacgcgcggctggccgcccgcgagctcttc
cgcacccgcgccgtcatccgccagctggcgggggcaccgggaactcagaagcttgagagt
gttgtgctcagtaaaatgaactttgaatcttttgtgagagatctgcttctggttcgtcat
tacagagttgaagtttacaagaacaaagcagggagtaaatctaccaaagaaaatgactgg
tatttagcatacaagggttctccaggaaatcttgcccagtttgaggaagttctctttgcc
aacaatgatatgtcaacggccattggggttgtgggggttaagctgtctactactgatgga
caaagagtagtaggagtggggtatgtcgacactacgctgagaaaattgagcgtctgtgag
ttcccagataatgatcaattctcaaaccttgaagctctactggttcaactaggaccgaag
gagtgtgtcctaccaggaggagagactgcaggagagatgggaaaactacgacaagttgtt
cagaggggagggatcctgattacagacaggaaaaaggcagatttcacaacaaaagatatt
gttcaggatctcaatcgcttgttaaaatcgaaaaaagaagaacaaatgaatagcgcagca
ttgccagagatggaaaagcaggttgctgtttcgtctttgtcggccattatcaagttttta
gagttgctgtcagatgagtctaattttggacaatttgaactaactacttttgatcttagc
caatatatggttctagataatgcagctgttcaagccctcaacctttttcagagttctgtg
gaaaatgctaacactgcacagtctctagctggtttactaaataaatgcagaacccctcaa
ggacaaagactagttaatcagtggatcaaacaaccacttatggacaagaatagaattgaa
gaaaggttgaatttggttgaagcttttgtggtggatccagaactacgtcagtgccttcaa
gaagatctcttacgtcgcttcccagatcttaaccggctggcaaagaaatttcagagacaa
gcagcaaacttacaggactgttaccgaatgtatcaggctattaatcaactgcctaatgtt
gtacaagcactagaaaaacatgaaggagctcaccagatgttgttgttggcagtgtttata
acacctcttaatgatatctactctgacttctcaaagtttctggagatgatagaaacaaca
ttggacatggataaggtggagaatcatgaatttcttgtcaaggcttcttttgatcctaat
ttgacagaattaagagagaagatgaatgaactggaagaaaaaatgcagtcctttttaaag
agtgcagccaaagaactaggtttggaagctggcaaaagtatcaaactggagacaaactca
cagtttggacatcactttcgaataacttgcaaggaggaaaaagttctccgtaacaattca
aaatatggaatagttgatacacagaagaatggtgtgaaatttactaacagcaaactgagc
tccgtcaatgacgaatatataaagaacagagaagagtatgaagaagctcaggatgcaatt
gttaaggaaatcattaacattgcttcaggttatgcagaaccaatacagacgatgaatgat
gtgatagctcaactagatgcaattgtcagttttgctcatgtgtcaaacggagcaccagtg
ccgtatgtccgtcctgtcattctggaaaagggacaaggaaggattgtactgaaaggtgcc
aggcatccttgcatcgaagtgcaagatgaggtggccttcatccccaatgacattacattt
gagaagggcaagcagatgttccacattattactggccctaacatgggaggaaaatcaacc
tacatccgacagacaggggtgattgtccttatggcccaaactgggtgttttgtaccatgc
gactctgcagaaataaccattgtggattgtatcctggctcgggtgggagctggagacagt
cagctgaaaggcgtgtctactttcatggctgaaatgttagaaactgcttcaatccttagg
acagcatctgaaaactccctgataatcattgatgagctgggaagaggaacttctacctat
gatggctttggcttagcatgggctatttcagaatacattgctagcaaaatctgtgctttc
tgtatgtttgctacacattttcatgaactgacagctcttgctgatcaagtgccaacagta
aataacctacatgttactgctctgaccagtgatgatacactgacgatgctttatcgtgtc
aaggaaggtgtttgtgaccagagttttggcatacatgtagcagagttggcggctttccca
aaacatgtgatagaaagtgcaagagagaaagcactggagctggaggagtttcaaaacatt
ggcaagtccaaggaatctgaaggagaaccaccagccaagaaattcttcagagaaagagag
gaaggtgaaaagataattcaggattttctttgtcaagtgaaagcgttgcccctgacaggt
atgtcagaagaagacatcaaaatcaagctgaaacagctgagagacgatgtgttggcaaag
aacaacagttttgtgaatgaaataatttcccgaacgaaagttacatcatga
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