Ciconia boyciana (Oriental stork): 140649626
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Entry
140649626 CDS
T10948
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
140649626 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cboy03400
]
140649626 (MSH6)
DNA repair and recombination proteins [BR:
cboy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
140649626 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
140649626
NCBI-ProteinID:
XP_072713200
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All DBs
Position
3:111226693..111241966
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AA seq
1376 aa
AA seq
DB search
MSRQSTLLRFFPKASPAPPRAAPPAPSPPPAPAPPPAPAPPQAGAGTRRRASGEQNGREA
ATSPAGAASNGAPGRAAARRKEAGEKGGGGGAAAKAPSVSCEYSPGDLVWAKMEGYPWWP
CLIYNHPTERTIVRGKGKSTRVHVQFFDDSPTRGWVSIKYLRPYKGSSDGETLKGGMFYS
TKPEIKRAMVLADDAMSKDKTKRLELAVCSEPSDTEEEEEEEEMEQISESASGNSDDCNS
DEDVKSNKRVTSRESAIKAKRRRVLDSDSDHDGSDVEFKPDVKEAASSEEASSGVDENES
TDTETDTESVAESPIKVPSKRKRREINKPAKRSSLENERSETPKRAATVSLEAKSKLTSF
AAPENFESQANTSSGGISGFAVWEHEKLDWLQEGKKKDAHRKRQGDPDYDPCTLYVPEDY
LNKCTPGMRRWWQLKSQNFDAVICYKVGKFYELYHMDAVTGVNELGLIFMKGTWAHSGFP
ETAFGRFSDVLVQKGYKVARVEQTETPEMMETRYKSMAHPTKFDKVVRREICRIITKGTQ
TYSVLDCDPSENHNKYLLCVKEKEDSSGQRVYGVCFVDTSVGKFYVGQFPDDRHCSRFRT
LVAHYTPVQVLYEKGNLSVDTQKILKGSLVSCIQEGLISGSQFWNASKTLKVLLEEGYFK
EKQNSENGCSLPSVIRSLTSESDSLGLTPGENSELALSALGGCVFYLKKCLIDQELLSLA
NFVEYVPVDIDTAKTTSLSSFFAKTDQRMVLDGVTLMNLEVLQNGTNGTTEGTLLERIDS
CCTPFGKRLLKQWLCAPLCNPKSINDRLDAVEDLLAVPDKMSEVSEHLKKLPDLERLLSK
IHSIGSPLKSQNHPDSRAIFYEEIKYSKKKIADFLSALEGFKVMNEIVDVMEEVASDFKS
KVLKQLVTRKAKNPDGRFPDLSAELKRWDTAFDHNQARKTGVITPKVGFDPDYDKALQDI
KAVEEDLHKYLDKQRKLLGFKSMLYWGAGKNRYQMEIPESVVSRNLPEEYELKSTRKGYK
RYWTKEIEKMLAAMVNAEERRDAALKDCMRRLFYNFDKNSKDWQTAVECIAVLDVLMSLA
NYSQDGDGPLCRPVILLPVDSAPPFLELKNSRHPCITKTFFGDDFIPNDIVIGSKDEDSS
SEASCVLVTGPNMGGKSTLMRQAGLLVIMAQLGCYVPAEVCRLTPIDRVFTRLGASDRIM
SGESTFFVELSETSSILQHATEHSLVLVDELGRGTATFDGTAIASAVVKELAEKIKCRTL
FSTHYHSLVEDYSHNLAVRLGHMACMVENESEDPSQETITFLYKFIEGACPKSYGFNAAR
LANIPEEVIQKGHRKAKEFEKMTISLRVFRYLCLVVDGATRDVNAVQKLTTMINHL
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccagagcaccctgctccgcttcttccccaaggcctctccggcaccgccgcgg
gcggctccaccggcaccctctcctccaccggcacccgctcctccaccggcacccgctcct
ccacaggccggcgcggggacccgccgccgcgcttcgggggagcagaatggccgcgaggcc
gccaccagccccgccggcgcggcgagcaacggcgcaccgggcagagctgcggcacggcgc
aaggaggcgggggagaagggcggagggggcggcgcggccgccaaggcccccagtgtctcc
tgtgagtattcgcctggtgacttggtctgggccaagatggaaggttatccttggtggccg
tgcctcatatacaaccacccgactgaaagaacaatagtcagaggaaaagggaaatccact
cgtgtccatgtacagttttttgatgacagccctacaaggggctgggtcagtattaaatat
ctgaggccatataaaggttcatcagatggggagacgctgaagggaggtatgttttatagt
acaaagcctgaaattaaaagagcaatggtgctagcggacgatgcaatgagtaaagataaa
actaagcggcttgaactggcagtatgcagtgaaccttcagacacagaggaagaggaggaa
gaggaggaaatggagcagataagtgaaagtgcatcaggcaacagtgatgactgcaatagt
gacgaggatgtgaagagtaataagcgagtaacaagcagggaaagtgccataaaagccaaa
agaagaagagtgttggattctgacagtgatcatgatggctctgatgtagagttcaagcct
gatgtgaaagaagcggcgagcagcgaggaagctagtagtggggtggatgaaaatgaatct
actgacacagagacagacacagagagtgttgcagaaagtcccataaaagtcccttctaaa
cgaaagagaagagagataaacaagcctgctaaaaggagtagcttagaaaatgaacgttct
gaaacgcccaaaagagcagcaacggtttctttagaagccaagtctaagctgacgtcattt
gcagcacctgaaaattttgaatctcaagcaaatactagcagtggaggcatcagtggcttt
gcagtatgggaacatgaaaaacttgattggctgcaggaagggaaaaagaaggatgcgcac
aggaaacggcagggtgaccctgattatgacccatgtactctgtatgtacctgaggactat
ctcaacaagtgtacaccaggaatgcggaggtggtggcagctgaaaagtcaaaactttgat
gctgtgatttgctacaaagttggaaaattctatgagttgtatcatatggatgcagtcact
ggcgtaaatgagttgggcctgatctttatgaaaggtacttgggcccattcaggttttcca
gaaactgcatttggcagattctctgatgttctagtgcagaaaggctacaaggtagcccgt
gttgagcaaacagaaactcctgaaatgatggaaacgcgctacaagtcaatggcccaccca
acaaaattcgacaaggttgtacgccgagaaatatgcagaatcatcaccaaaggaactcag
acttacagcgttctggactgtgatccctctgagaaccataacaaataccttctgtgcgtt
aaggaaaaagaagactcctctggacagcgtgtttatggggtctgctttgttgacacgtcg
gtggggaagttttacgtaggccagttcccagatgaccggcactgctcgaggtttaggact
ttagtagcgcattacactcctgtgcaggtactgtatgagaaggggaacctgtctgtggat
acacagaagatactgaagggctcacttgtttcttgcattcaggaagggctgatctctggt
tcccagttctggaatgcatctaaaacactaaaagtccttcttgaagaaggatatttcaag
gagaaacagaactctgaaaatggatgttctctgccctctgtcatcagatctctgacttca
gaaagtgactcactgggattaactcctggtgaaaacagtgaattagctttgtcagctctt
gggggatgtgtcttctatctcaaaaaatgtctgattgatcaggagctgttatcgctggca
aactttgtggagtatgtccctgtggatattgatactgcaaaaactacgagtttgagtagt
ttctttgccaaaactgaccagcggatggtgctggatggagtcaccctgatgaacttggaa
gtcctgcagaacggaaccaacggaaccaccgaaggtactttgttggaaaggattgactct
tgttgtacgccatttgggaagcgactcctgaaacagtggctctgcgctccactttgtaat
cctaaatccatcaacgatcgtttagatgctgttgaggatcttctggcagtgccagataaa
atgtctgaagttagtgagcacctgaagaaacttcctgaccttgaaaggctgctcagcaaa
atccacagtattggatcaccacttaaaagtcagaaccatcctgacagcagggccatcttt
tatgaagaaatcaaatacagcaaaaaaaaaattgctgactttttgtctgcactggagggg
tttaaagtaatgaatgaaattgttgatgtcatggaagaagttgccagtgacttcaaatct
aaagtccttaagcagctagtcacccgcaaagccaaaaatccagatggccgcttcccagac
ttgagtgcagagcttaaaagatgggatactgcttttgatcataaccaggctcgaaagaca
ggagtgattactccaaaggtgggctttgaccctgattatgataaagcactacaggatatt
aaagctgttgaggaagatcttcacaagtacctggataagcaacgcaaactgcttggattc
aaatccatgttgtactggggggcaggcaaaaacagataccaaatggaaataccggaaagt
gtggtatcacgtaatttgcctgaggaatatgagttgaagtcaaccaggaagggatataag
cgctactggaccaaggagatcgagaagatgctggctgcaatggttaatgctgaagagcgc
agagatgcagcactaaaagactgtatgaggcgtttgttttacaactttgataaaaatagc
aaagactggcagacagctgtggaatgcattgctgtgttagatgtcttgatgtcccttgct
aactacagtcaagatggtgatggaccactgtgccgacctgtaattctactgcctgtggat
agtgctcctcccttcctggaacttaaaaattcacgccatccatgcattacaaaaactttc
tttggggatgattttattcctaatgacatcgtgataggcagcaaagatgaagatagcagt
agtgaagcttcctgtgtgttagtaactggcccaaatatgggtggcaaatctacgctcatg
agacaggctggtctcctggttataatggctcaactgggatgctatgtacctgctgaagtc
tgcaggcttacaccgattgacagagtatttacgagacttggcgcctcggacagaattatg
tcaggtgaaagtaccttctttgttgaattgagtgagacttccagcattctccagcatgca
acagagcattcccttgttcttgtggatgaactgggcagaggcacagctacttttgatgga
acagctatagcgagtgcagtggtgaaagaactggcagagaaaatcaagtgtcggactctg
ttctccacacactaccattcgctggtagaggattactcacacaacctggctgtgcggctc
ggtcacatggcatgtatggttgaaaatgagagtgaagatccaagccaggaaacaattaca
ttcctgtataagttcattgaaggagcatgtccaaagagctatggcttcaatgcagcaaga
cttgctaatattccagaggaagttattcaaaaggggcacagaaaagcaaaagagtttgaa
aaaatgaccatttcgctgagagtatttaggtatctgtgcctggtggtggacggtgcaaca
cgtgatgtgaatgctgttcagaaacttaccactatgatcaatcatctttaa
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integrated database retrieval system
