Ciconia boyciana (Oriental stork): 140650229
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Entry
140650229 CDS
T10948
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy00100
Steroid biosynthesis
cboy01100
Metabolic pathways
Module
cboy_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
140650229 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cboy01006
]
140650229 (FDFT1)
Enzymes [BR:
cboy01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
140650229 (FDFT1)
Prenyltransferases [BR:
cboy01006
]
Terpene biosynthesis
Squalene/phytoene synthase
140650229 (FDFT1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
SCC3_C
HAUS4
Motif
Other DBs
NCBI-GeneID:
140650229
NCBI-ProteinID:
XP_072714379
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All DBs
Position
3:4109229..4124340
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AA seq
428 aa
AA seq
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MSAAPMELLRKWLGHPEDIYNLLRFKMGGYRAVMPRIDPDSLGRGLRICYRYLNQTSRSF
AAVIQALDGELRHAVCIFYLVLRALDTIEDDMTISLDVKVPMLHEFHSYLYQPEWKYMES
KEKDRQVLEDFPTISMEFRNLSKVYQDVISDICHKMGVGMAEFLEKKVDSQHEWDKYCHY
VAGLVGIGLSRLFSASELEDPIVGQDTELANSMGLFLQKTNIIRDYLEDQLEGREFWPRE
VWSRYAKKLSDLAKPENIDMAVQCLNELITNALHHVPDVLTYLSRLKNQSVFNFCAIPQV
MAIATLAACYNNKQVFSGVVKIRKGQAVTLMMDATNIQAVKAIMYQYVEEIYQKIPSTDP
SSNKTQQVITSIRAMSLPGSPMASRHHYSPIYLSCAMLLAALSWQYLSTISKATEEMVLN
RNSSCLFS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggcccccatggagctgctgaggaaatggctgggccaccccgaggacatctac
aacctgctgcggttcaagatgggcggctaccgggccgtcatgccgcggatcgacccggac
tcgctgggacgcggcctccgcatctgctaccgctacctcaaccagaccagccgcagcttc
gccgccgtcatccaggccctggacggagagctgcgacatgccgtctgtatattctaccta
gttctccgtgccctggatactatagaggatgacatgaccatcagcttagatgtaaaggtc
ccgatgctgcacgagtttcactcctatctctatcaaccagagtggaaatacatggagagc
aaggagaaggaccggcaggtgctcgaggacttcccaacgatctccatggagttcaggaac
ctgtcaaaggtctaccaggacgtgatttcagatatttgccacaagatgggcgtcgggatg
gcagagttcttggagaagaaggtggactctcagcacgagtgggataagtattgtcactac
gttgctgggctggtgggaatcggcctttcccgtctcttctctgcatcagagctagaagat
cctattgtggggcaagacacagagctggcaaactccatgggcctcttcctgcagaaaacc
aacatcatccgtgactatctggaggaccagctggagggaagggagttctggcccagagag
gtttggagcagatatgcaaagaagctctctgatcttgccaaaccagagaacatcgatatg
gctgtccagtgtctgaatgagctcatcaccaacgccctccaccatgtccctgatgtcctc
acatacttatcccgcctgaaaaaccaaagtgtcttcaacttctgtgctatcccccaggtg
atggctattgccaccttggctgcctgctataacaacaagcaggtgttcagtggggtcgtg
aagatccggaagggacaagccgtcactctcatgatggatgccacaaacatacaagctgtc
aaagccatcatgtaccagtatgtggaagagatctaccagaagatcccaagcacggaccca
tcatccaacaagacgcagcaggtcatcacctccatccgcgccatgagcttgcctggcagc
cccatggcatcacgccaccactactcccccatctacctgtcatgtgccatgctcctggcc
gccctgagctggcagtacctgagcaccatctccaaggccaccgaggagatggttttaaat
agaaactccagttgcctcttttcctga
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