Ciconia boyciana (Oriental stork): 140650331
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Entry
140650331 CDS
T10948
Symbol
SDC1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy04512
ECM-receptor interaction
cboy04514
Cell adhesion molecule (CAM) interaction
cboy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
140650331 (SDC1)
04514 Cell adhesion molecule (CAM) interaction
140650331 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
140650331 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cboy04131
]
140650331 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cboy04090
]
140650331 (SDC1)
00535 Proteoglycans [BR:
cboy00535
]
140650331 (SDC1)
Membrane trafficking [BR:
cboy04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
140650331 (SDC1)
CD molecules [BR:
cboy04090
]
Proteins
140650331 (SDC1)
Proteoglycans [BR:
cboy00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
140650331 (SDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
140650331
NCBI-ProteinID:
XP_072714607
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All DBs
Position
3:11224519..11250738
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AA seq
310 aa
AA seq
DB search
MMINVVAVWLVALCFQAAVPQTTNLNLPPEDLDSSGDDDDAFSGSGAGPLTDQSRTWRIP
GEPTNSSLLATPMDFNEQPFPGIESRTEKELVSPSATSNVVTEEPVVAVKDEVPILGSPD
EKPTTDVVTTTVRSLTTHFPSVVHVTPSEASGTVHELEPKIPSSDVPDTRDMPKPHSAIP
HEGDITATPMTTAPKDVVPTREEVFEDGSGDPGDFILTKDEDLVPTRNSEVLADSGRNAK
AAGASGIMDRKEVLGGVIAGGLVGLVFAVFLVAFMLYRMKKKDEGSYSLDEPKQSNGGYQ
KPHKQEEFYA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatgataaacgtggtggccgtgtggctggtggccctttgcttccaggctgctgtcccg
caaactacaaatctgaaccttcctcctgaagatcttgattcatctggtgatgatgacgat
gcgttctcaggttcaggtgcaggtcccctgactgaccagtctcgcacctggagaatccca
ggagaaccaactaattcctcattactggcaacaccaatggatttcaacgaacagccattt
cccgggattgagagccgaactgaaaaggaattagtatctccttctgcaactagtaatgta
gtgacagaggagccagttgtagctgtgaaggacgaagtacccatcctgggctcacctgat
gagaaaccaacaactgatgtggttacaacaacagtcagaagcctcactactcactttcct
tcagtggttcatgtaactccttcagaagcctcaggcacggtccatgagctcgaacctaaa
atccctagctctgatgtgccagacactagagacatgcctaagccccactctgccatccct
catgagggagacatcactgccacccccatgacgacagctccaaaggatgttgttcctaca
cgtgaggaggtttttgaagatggctctggagacccgggagacttcattttgactaaagat
gaggatttggtccccacccggaactcagaagtactggctgactctgggaggaatgccaaa
gcagcaggagcctcgggaattatggacagaaaagaagttcttggaggtgttattgctgga
ggactagtaggcttggtgtttgcagtgtttctagttgcatttatgctgtacagaatgaag
aaaaaagacgaaggcagctattcactggatgaaccaaaacagtctaacggaggataccaa
aaaccacacaaacaagaggaattctatgcataa
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