Ciconia boyciana (Oriental stork): 140650545
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Entry
140650545 CDS
T10948
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140650545 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cboy03021
]
140650545 (SMARCA2)
03036 Chromosome and associated proteins [BR:
cboy03036
]
140650545 (SMARCA2)
Transcription machinery [BR:
cboy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
140650545 (SMARCA2)
Chromosome and associated proteins [BR:
cboy03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
140650545 (SMARCA2)
Chromatin remodeling factors
BAF complex
140650545 (SMARCA2)
PBAF complex
140650545 (SMARCA2)
GBAF(ncBAF) complex
140650545 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
140650545
NCBI-ProteinID:
XP_072715080
LinkDB
All DBs
Position
4:46850057..46969327
Genome browser
AA seq
1568 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHPMPTM
GPTDYPQEGMHQMHKSIDGLHEKGMVEDVHCGSMKSMRPPHPGMGPPQSPMDQHSQGYMS
PHPSPLGAPEHVSSPMSGGGPTPPQMTPSQPGPIIPGDPQVMNQPNRGPSPFSPVQLHQL
RAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQQQPPSAFNRQSGIGLHTMSGAATGP
GPAPGMPGHTAAITPKTWTEGQAPDMSVSNAQQKLPAPPPSGRPSPAPPAAQPAAAMPGP
SVPQPPPGQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLP
GSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLRE
ARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHA
NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVW
EHKQAQAAKEKKKRRRRKKKAEENAEGMASGLGPDGEPIDESSQMSDLPVKVTHTETGKV
LLGPEAPKASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEEDDEEESSRLEADEKILLDP
NSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAITERVEKQSSLLINGTL
KHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLST
LSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIR
WKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFK
SCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY
VIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQH
IEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMED
YFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIF
DSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMF
DQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRRED
ARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQ
WLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGKEDGEKAKKRRGRPPAEKLSPNPPKLT
KQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYR
SLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNDDEDD
DEEEESESESKSVKVKIKLNKKDEKSREKGKGKKRQSRAKAKPVVSDDDSDEDQDENDQS
EASGSDDE
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcctacagaccctggcgccatgcctcatcctggtccttcccctggaccagga
ccttcacctggaccgattctaggacctagcccaggaccaggaccatctcctggctcagtt
cacagcatgatggggccaagtcctggcccgcccagtgtcccacatccaatgccgacaatg
gggcctactgattatccacaggaaggcatgcaccaaatgcataagtctattgatggcttg
cacgaaaaaggaatggttgaagatgttcattgtggctccatgaagagtatgcgacctcct
caccctggaatgggcccacctcagagtccaatggaccagcatagtcaaggttatatgtct
ccacacccatctccactaggagcaccagagcatgtgtccagtccaatgtctggaggaggt
ccaacgccaccccagatgactcccagccagccaggacccattataccaggagacccacaa
gttatgaatcagcctaacagaggtccttcccctttcagccctgtacagctgcatcagctg
cgggctcagattctagcatacaaaatgttagctagaggtcagcctttaccagaaaacctc
cagcttgctgttcagggcaagaggaccctgcctggcattcaacagcagcagcctcccagt
gccttcaacagacagtctggtattgggttacatacaatgagtggtgctgcaactggacca
ggacctgctccagggatgcctggacatacagctgccattacccctaaaacttggactgaa
ggccaagccccagatatgagtgtctccaatgcgcagcaaaagcttcccgcaccaccccct
agtgggaggccttctcctgccccccctgctgcccagcctgctgccgccatgcctgggcct
tctgtaccacagccaccacctggacagccttcacccattgttcagctgcagcaaaagcag
aatcgcatcagccctatccagaagccccaaggactggatcccgttgaaatactccaagaa
cgtgaatataggcttcaggctcgaattgctcacagaatccaggaactggagaacttgcct
ggttctctgccccctgatctgcgaaccaaagctacagtagagttgaaggcacttaggtta
ctgaacttccagcgccagctaagacaagaggtagtagcctgcatgcgtcgtgacacaaca
ctggagacagcgctgaactccaaagcctacaaacgaagcaagcgccagactttaagggag
gcccgtatgacagaaaagcttgagaaacagcagaagatagaacaggagaggaagcgtagg
caaaagcatcaggaatacctgaatagcatattgcagcatgctaaagattttaaagagtac
catcggtcagtcgctgggaaaattcagaaactttctaaagctgtggcaacttggcatgcc
aacactgagcgtgagcagaaaaaagaaactgagaggattgagaaagaaagaatgaggaga
ctaatggctgaagatgaagaaggctaccgtaagctgattgaccaaaagaaagatagacgc
ttggcctacctattgcagcagacagatgagtatgtggctaatttgactaacctggtatgg
gagcataaacaggcacaagcagccaaagagaagaagaagagaaggagaagaaagaagaag
gctgaagaaaatgcagaaggaatggcatctggtcttggtcctgatggagagcccatagat
gagagcagtcagatgagtgaccttccagtcaaagtgactcacactgaaacaggcaaagtt
cttcttggcccagaagcaccaaaagcaagtcagctggatgcttggctggaaatgaaccct
ggctatgaagttgctcccaggtcagacagtgaagatgaaagtggctctgaatatgaggag
gaggatgatgaagaagaatcaagcagattagaagcagatgagaagatactcctggatcct
aacagtgaggaagtttctgagaaagatgcaaagcaaatcattgagacagccaaacaagat
gtggatgatgaatatagcatgcaatatagtgctagagggtctcagtcctactacactgtt
gctcatgcaatcacagaaagggtggaaaagcagtcttctcttcttattaatggcacacta
aaacattatcagctccagggactggaatggatggtttcactctataataacaatctgaat
ggaattttagctgatgaaatgggactagggaagacaatacagactattgcactcatcact
tacctgatggagcacaaaagactcaatggcccctatctcatcattgttcccctttcgact
ctatccaattggacatacgaatttgacaaatgggctccttctgtggtgaagatatcttac
aagggtacacctgcaatgcgccgctcactcgttcctcagcttcgaagtggaaaatttaat
gttcttttaactacttatgagtacataataaaggacaaacatatccttgctaagattcga
tggaaatacatgatagtagatgaaggccatcgaatgaagaaccatcactgcaagctgact
caggtcttgaatactcactatgtggcccctaggcgaatactgctgactgggactccattg
cagaacaaattgcctgaactttgggctcttctcaatttcctcctcccaaccattttcaag
agctgcagcacctttgaacagtggttcaacgctccatttgccatgactggagaaagggtg
gacttaaatgaggaagaaactattctgatcattcgtcgtctccataaagtgctccgaccc
ttcttgctgagaagattgaagaaagaggttgagtctcaactgccagaaaaggtggaatat
gtgatcaaatgtgatatgtcagctcttcagaagatcctgtaccgtcacatgcaagccaag
ggaatccttctcacagatggttctgaaaaagacaagaagggaaaaggtggagcaaaaact
cttatgaacactatcatgcaattgagaaagatatgcaatcacccgtacatgtttcaacac
attgaggagtccttcgctgaacatttaggctactcaaatggtgtcatcaacggagctgaa
ctttatcgggcctcagggaagtttgagctactcgatcgtattctaccaaagttacgagct
actaaccatcgtgtgcttcttttctgtcaaatgacgtcactcatgaccattatggaagac
tactttgcctttcgaaatttcctttacctgcgtctcgatggcacaacaaaatcagaggat
cgagctgctctgctgaagaagttcaatgaacctgggtcacaatactttatcttcttgctg
agtacaagggctggaggcctaggcttaaatctccaggctgctgacactgttataatcttt
gatagtgactggaatcctcaccaggacttgcaggcccaagatagagctcaccgaattggt
cagcagaatgaagttcgagtcctgcgactgtgcactgtgaacagtgtggaagagaagata
cttgctgctgcgaagtataagctgaatgtagatcaaaaagttattcaggctggaatgttt
gatcagaaatcttcgagccatgaaaggagagccttcctacaggctatattggagcatgaa
gaagaaaatgaggaggaagatgaagttcctgatgatgagactctgaatcagatgattgct
cgacgtgaagaggaatttgatctctttatgcgcatggacatggaccgtcgcagggaggat
gccagaaaccccaagcgtaagccccgcttgatggaggaggatgaattaccatcctggatt
attaaggatgatgctgaagttgaaaggcttacctgtgaagaagaagaagagaaaatattc
ggaagaggatcccgtcaacgcagggatgtggactacagtgatgctctcacagagaaacaa
tggctgcgggcaattgaagacggcaatttggaagaaatggaagaggaagtccggcttaaa
aaacggaagagacgaagaaatgtggataaagattctgggaaggaggatggagagaaagca
aagaaaagaagaggcagacctccagcagagaagttgtcacccaacccacccaaactgaca
aaacaaatgaatgctatcattgatactgtgataaactacaaggacagttcaggacggcag
ctaagtgaagttttcattcagctcccatctaggaaagaattaccggaatattatgaattg
attaggaaaccagtggacttcaaaaagataaaggaaaggattcgcaaccataagtatcgg
agtcttggagacttggagaaagatgtcatgttgttgtgtcacaatgctcagacattcaat
ttggagggatcacagatctatgaggattccattgttcttcagtctgtgttcaaaagtgca
cgacagaagattgccaaagaagaagaaagcgaggatgaaagcaatgatgacgaagatgat
gatgaagaagaagaatcagaatcagaatcaaaatcagtgaaagtcaaaatcaagctaaat
aagaaggatgaaaaaagtcgggagaaaggaaaaggcaagaagaggcaaagccgagcaaaa
gccaagcctgtcgtgagtgatgatgatagtgatgaggatcaagatgaaaatgaccagtcg
gaagcaagcggaagtgatgatgagtga
DBGET
integrated database retrieval system
