Ciconia boyciana (Oriental stork): 140650805
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Entry
140650805 CDS
T10948
Symbol
VCP
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy04137
Mitophagy - animal
cboy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
140650805 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
140650805 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cboy03019
]
140650805 (VCP)
03009 Ribosome biogenesis [BR:
cboy03009
]
140650805 (VCP)
04131 Membrane trafficking [BR:
cboy04131
]
140650805 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cboy04147
]
140650805 (VCP)
Messenger RNA biogenesis [BR:
cboy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
140650805 (VCP)
Ribosome biogenesis [BR:
cboy03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
140650805 (VCP)
Membrane trafficking [BR:
cboy04131
]
SNARE
SNARE associated proteins
Others
140650805 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
140650805 (VCP)
Exosome [BR:
cboy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
140650805 (VCP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
TsaE
NB-ARC
ResIII
Viral_helicase1
NACHT
Sigma54_activat
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
140650805
NCBI-ProteinID:
XP_072715683
LinkDB
All DBs
Position
4:complement(23598499..23620245)
Genome browser
AA seq
806 aa
AA seq
DB search
MASGSDSKADDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGTGGGSGGNVYSEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggatccgattctaaagcggatgacttgtcgactgctattctgaagcagaag
aacaggcccaatcggttaattgttgatgaagccatcaatgaagacaacagcgttgtgtca
ctgtcccaggcaaaaatggacgaattgcagctgttcagaggagacactgttctgctaaaa
ggaaagaagaggagagaagcggtctgcattgttctatcagatgatacctgctcagatgag
aagattcgcatgaatagggttgtccgcaacaacctgagagtgcgcctgggtgatgtgatc
agcatccagccttgcccagacgtgaaatatggcaaacgtatccatgtgctgccgattgat
gacacagtagaagggatcacagggaatctgtttgaggtctatctcaagccgtacttcctg
gaagcatacagacccatcaggaaaggtgacatcttcttggtgcgtggaggcatgcgtgca
gtggagttcaaagtggtggagacagatccaagtccgtactgcatagtggctccagacaca
gtgatccattgtgaaggagagcccatcaaacgagaggatgaagaggaatcactgaatgaa
gtgggctatgatgacattggtggctgccggaagcagctggctcaaatcaaagagatggtg
gaacttcccctccgacaccctgcgctcttcaaggccataggggtgaagcctccacgtggg
atcctgctgtacggtcctcctggcactggtaaaacactgattgcccgagcggtggccaat
gaaacgggggcttttttcttcctgatcaacggtcctgagatcatgagcaagctggctggt
gagtctgagagcaacctgaggaaagcctttgaagaagcagagaagaacgctcctgccatc
atcttcattgatgaactggatgccattgctcctaagagagagaagacacatggagaggtg
gaacgtcgcatagtgtctcagctgttgactcttatggatggacttaaacagagagcacac
gtgatcgttatggcagctaccaacagacctaacagcattgacccagcactcaggcgattc
ggtcgttttgacagagaggtagatattggtatcccggatgccactgggcgcctggagatc
ctgcagatccacacgaaaaatatgaaactggctgatgatgtggatctggaacaggtggca
aacgagacccatggccatgttggtgctgacttggctgctctttgctcagaagctgctctt
caggctatcagaaagaagatggatctcatagacctagaagatgaaaccatcgatgctgaa
gtgatgaactcgctggctgtgaccatggatgacttcaggtgggctctgagccagagcaat
ccttctgctcttcgggagactgtggtggaggtgccacaggttacctgggaagatattggt
ggtctagaagatgtaaagagagaactccaggagcttgtacagtatcctgtggagcatcca
gacaagttcctcaaatttggtatgaccccatcgaaaggggttttgttctacgggccaccg
ggttgtggtaagacgctgctggccaaagccattgccaacgaatgccaggcaaacttcatt
tccatcaaggggccggagttgctcactatgtggtttggcgagtctgaagccaacgtgcgt
gagatcttcgacaaggcccgccaagcagccccttgtgtgctcttctttgatgagctggac
tccatcgcaaaggctcgaggtgggaatatcggcgatggtggtggtgctgcagaccgcgtc
atcaaccagatcctgacagagatggacggcatgtccaccaagaagaacgtcttcatcatc
ggtgccaccaacaggccagacatcattgacccagccatcttgcgccctggccgcctggat
cagctcatctacatccccctgcctgacgagaagtcccgggttgctattcttaaggccaac
ctgaggaaatcaccagttgccaaggatgttgacctggatttcctagctaagatgaccaat
ggcttttcgggggctgacctgacagaaatttgccagcgtgcctgcaaactggccatccgc
gagtccatcgagagtgagatcaggcgagagcgcgagaggcagaccaacccttccgccatg
gaagtggaagaggacgacccggttcccgagatacgcagggatcactttgaggaggccatg
cgctttgctcgccgctctgtcagtgacaacgacatcaggaaatacgagatgtttgcacag
actctacagcagagccgtggctttggcagcttcaggttcccgtcgggtaaccagggcggc
gccggtccgagccaaggcacaggaggtggcagcggcggcaacgtgtacagtgaagacaat
gacgatgatctctacggttaa
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