KEGG   Ciconia boyciana (Oriental stork): 140651610
Entry
140651610         CDS       T10948                                 
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
  KO
K02999  DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
Organism
cboy  Ciconia boyciana (Oriental stork)
Pathway
cboy03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cboy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    140651610 (POLR1A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cboy03021]
    140651610 (POLR1A)
Enzymes [BR:cboy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     140651610 (POLR1A)
Transcription machinery [BR:cboy03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     140651610 (POLR1A)
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4 HMG_box Pox_C7_F8A
Other DBs
NCBI-GeneID: 140651610
NCBI-ProteinID: XP_072717367
LinkDB
Position
5:7109188..7148647
AA seq 1708 aa
MRPPKVVPWRRLVGVSFGMYTAEEIRKLSVKLITNPQYLDNVGNPAINGLYDLALGPPDS
KEVCATCMQNFSNCPGHFGHIELPVTVYNPLFFDKLYLLIRGSCLNCHMLTCTRAVVHLL
LSQLKVLEKGLLHAVHDLEVILNRFLEQCADATGSEIEEELNHHVNEILQSHQIRDHCSN
VKNVCECRNKLIAQFWKAHMSSKKCPNCKSRRSLVRKEHNSKLTVTYPSTVYHKSGEEGI
LDEPAAIDESQLGKRGYLTPMTTKEYILALWKNEGFFLRYLLSGMDPHESSGFSPDMFFL
DLLVVPPSRYRPINRVGDRLFTNGQTVNLQAVMKDAKMIRKLLVFMAKEQCQPIKIAEEE
IQTETGENNEPLDHSVLTMIPGQTIADKLYNAWIRLQSHVNIVFDSDMDKLMTEKYPGIR
QLLEKKEGLFRKHMMGKRVDFAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVK
ELRQAVINGPKVHPGASMVINEDGSRTVLSASSLTQREAIAKQLLTPSSGAPQTGLKIVC
RHIKNGDVLLLNRQPTLHRPSIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFP
QSELGRAEAYTLAFTDEQYLVPKDGKPLPGLIQDHMISGVSMTVRGCFFTREQYMELVYR
GLTDKKGRIKIFPPAIMKPQQLWTGKQVVSTLLINIIPENHIPLNLTGKAKIGGRAWVKG
PANRCPNLDSMCESQVIIRNGELLCGVLDKAHFGSSAYGLVHCCYEIYGGETSGKALTCL
GRLFTAYLQLYRGFTMGIEDILVKPEADYKRQKIIEKSRQCGVEAVRAALNLPETASCEE
VQGKWQDAHLRKDQRDFNMVDVKFKEEVNSYNNEVNKVCMPFGLHRRFPENNLQLMVQSG
AKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFQPYDFSPSSGGFVTGRFLTGIKP
SEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGE
DGLDIPKTQFLQPKQFPFIAENYEVIQKTNHLDEALAKMESHQANQQFKAIKKWRARHQN
SVQREGGFLLFSQKKMASVKAQIPGGEIKNGRDPATLQLLKMWYELDEKKRRKYLKKANR
CPDPSLGVWRPDTYFASVSETFENGVEDYINKWESENRRSYMRLALSSDRLKDLLYLKWQ
RSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKT
PTMSVPVFNTKKALKKVKQLKKQLTRVCLAEVLQKVEIEESLHVKCKQNKHHLYKVKFHF
LPHEYYREEKCVKPREILHFMETRFFKIFLEAIKRKNAKMTSFTEVSTRKATQKDVDGDH
DKTQNNQEAPAEEEENIVDAEADEGDGDATEAKRRKNQEEEVDYESEEENGEESIDENLE
DEEAESEKEERTPGAEDQIGADDDESQHLSFMSQTKKEKARLLQSAELRVNAVLDSHPSI
QDYVFDTENELWCEVSLALPLMKVHFDLSSLLVSLARSTVIHEVKGITRCLLNESTNKQG
EKELILQTEGINLAELFRYSDILDLNRLYSNDIHAMAKNYGIESALRVIIKEIKDVFAVY
GIVVDPRHLSLVADYMCFEGFYKPLNRFGIQSNSSPLQQMTFETSYKFLKEATMMGAHDE
LRSPSACLVVGKVVKGGTGLFDLKQPLT
NT seq 5127 nt   +upstreamnt  +downstreamnt
atgaggccgccgaaagtagtgccgtggcggcggctggttggggtctccttcgggatgtac
acggccgaggagatcaggaaactgagtgtaaaactcataacaaatcctcagtatttggat
aatgtgggaaatccagccattaatggactgtacgacttggctttgggacctccagactcc
aaagaagtgtgtgcaacttgcatgcagaacttcagcaactgccctggccattttggccat
atagaactgcctgtgactgtctacaaccccctgttttttgataaattataccttctaatt
cgaggttcttgtttaaattgtcacatgctgacatgtactcgagctgtggttcacttactg
ctaagtcagctgaaggttctggaaaaagggttacttcatgccgtccacgatcttgaagtc
attctgaacaggtttttagagcaatgtgcagatgcaacaggttcagaaattgaagaagag
ttaaatcaccatgttaatgaaatattacaaagtcatcaaataagagatcactgttcaaat
gtaaaaaatgtatgcgagtgtagaaataaactgatagcacagttctggaaagcacatatg
agttcaaagaaatgcccaaactgcaaatctaggagatcactagtgcgaaaagagcataac
agcaagctgacagtaacctatccttctacagtgtaccataagtcaggagaggaaggcatc
ctggatgagccagcagctattgatgaaagccaattagggaagagaggatacctgacacca
atgactaccaaggaatacatcctggctctgtggaagaatgaaggtttctttttgcgttat
ctcttgtctgggatggatccccatgagagttcgggattcagtccagacatgtttttttta
gatctacttgtggttccaccttcaaggtatcgtcccataaatcgcgttggagaccgactg
tttacaaatggtcagacggtgaacttgcaggctgtcatgaaagatgccaaaatgatccgg
aagctcttggttttcatggcaaaagaacaatgtcagccaataaaaattgcagaagaagaa
atccaaacagagacaggagagaataatgaacctctggaccattctgtcctgacaatgatt
ccaggacagaccattgcagataagctgtacaacgcttggattcgtcttcagagccatgtc
aacattgtatttgatagtgacatggacaaactaatgacagaaaaataccctggtattcgt
cagctattagagaaaaaggaaggactgttccgcaagcacatgatgggaaagcgtgtggat
tttgctgctcgatcagtcatttgccccgatatgtacattggtaccaatgagattggcatt
cctatggtatttgctaccaaactgacttaccctcagccagtcactccctggaatgtcaaa
gagctgaggcaggctgtcataaatggcccaaaggttcaccctggggcctccatggtcatt
aatgaagatggatctcgtacagtgttgagtgcaagcagcctgacccagagggaagccata
gctaagcagctcctcactccttcttcaggcgcgccccagacaggactgaagattgtatgt
cgacatattaaaaacggagatgtccttctactgaaccgtcagcccactcttcatagaccc
tccatccaagctcaccgggcccgaatcctgcctggagaaaaagtgctgaggcttcactat
gccaactgtaaggcttacaatgctgattttgacggtgatgaaatgaacgcccattttcca
cagagtgagctgggtagagcagaagcctataccttagcctttactgatgaacagtatctg
gttccaaaggatgggaagccacttcctggcttgatccaggatcacatgatttctggagtt
agcatgacagtccggggctgcttttttaccagagagcaatatatggagcttgtttaccga
ggactaacagacaaaaaaggaagaattaaaatctttcctcctgccattatgaaaccacag
caattatggacaggaaagcaggttgtttctacattgttaataaacataattccagaaaac
cacatcccactgaatttgactgggaaagctaagattggtggaagagcctgggtaaaggga
cctgcaaacagatgtccaaatcttgattcaatgtgtgaatctcaggttattattagaaat
ggggaattactgtgtggtgtcttggacaaagctcactttggcagctctgcctatggcctg
gtccattgttgctatgaaatctatggaggtgaaaccagtgggaaagcactaacatgtcta
ggacgcctctttactgcttatctgcagctgtacaggggatttacaatggggattgaagat
attttggttaaacctgaagcagactacaaaagacaaaaaatcattgaaaagtcaaggcag
tgtggtgttgaagctgttagagctgctcttaatttgccagaaacagcatcatgtgaggag
gttcaagggaaatggcaggatgcccatctccgcaaagaccagagggattttaacatggtt
gatgtgaaattcaaggaggaagtaaacagttacaacaatgaagttaacaaggtttgtatg
ccctttggtctccacaggagattcccagagaacaatttgcaattgatggtacagtcagga
gccaaaggatccactgtaaatacgatgcagatttcttgtttgctgggccagattgagttg
gaagggcgaagacccccactgatggcatctggcaaatcgctgccatgtttccagccttat
gatttttcccctagttcaggaggatttgtgactggaagatttctcactgggatcaaacct
tctgaattcttctttcactgcatggctggcagggaaggtctcgtggacacagctgtcaaa
accagccgttctgggtacctacaaaggtgtatcataaagcatttggaaggactggtagtt
cagtatgatctgactgtacgagatagtgatggcagtgtggtgcagtttctgtatggagaa
gatgggcttgatatccctaaaactcagttcttacaacccaagcagtttcctttcattgca
gaaaactatgaggtaatccagaagacaaaccatctggatgaagctttagcaaagatggag
tctcaccaagctaaccagcagttcaaagccattaaaaagtggcgagccaggcaccaaaac
tctgtgcaaagagaaggaggttttctgttgttttctcaaaagaaaatggcaagtgtaaaa
gcacagattccaggaggagaaatcaaaaatggaagagatcctgctactttacagttattg
aagatgtggtatgaactagatgagaagaaacggagaaagtatctgaagaaggcaaatagg
tgtcctgacccaagccttggtgtttggcgtccagatacttattttgcatctgtttcagaa
acatttgaaaatggagttgaagattatatcaacaaatgggaatctgagaacagacgaagc
tatatgcgcctagccctttcttctgatagattaaaggatttgttgtatttaaagtggcag
cgatctctttgtgacccaggagaagctgtgggtcttcttgcagctcagagtattggggaa
ccttccacccagatgactctgaacaccttccactttgctggcagaggtgaaatgaatgtc
acattaggtattccaaggttgcgggaaatattgatggtagccagtgcaaatattaaaacg
ccaacgatgagtgttcctgtgttcaataccaagaaagctctcaagaaggtgaaacagctt
aagaaacagctcacaagagtgtgcttagctgaggtcttgcagaaggttgagatagaggaa
tccctgcatgtgaagtgcaagcagaacaaacatcacctctacaaagtaaaattccatttc
ttgccccatgaatattaccgagaggagaagtgtgtgaagcccagggagatcttgcacttc
atggaaacaaggttctttaaaatttttctggaagcaattaaaaggaagaatgcaaagatg
acatcttttactgaagtcagcacccggaaggcaactcagaaagatgtagatggtgaccat
gacaagacacagaataatcaggaggctccagcagaggaagaagagaacattgttgacgca
gaagctgatgaaggggatggcgacgctacagaagcaaaacggagaaagaaccaagaagaa
gaggttgattatgagagtgaagaagagaatggggaagaaagcattgatgagaatctagaa
gatgaagaggctgaatcagaaaaagaagaaaggactcccggtgcagaagatcagatcgga
gcggatgatgatgaatctcaacatctttccttcatgtctcagactaaaaaagagaaagct
cgattacttcagtcagcagaattgcgagtaaatgctgttctggacagccacccctcaata
caggattacgtgtttgacactgaaaatgaactttggtgtgaggtttcattggcacttccg
ttgatgaaggtgcactttgatctctcctccttgcttgtctctcttgcacgaagcacagtc
attcatgaagtgaaggggatcacgcgatgcttgttgaatgaaagtaccaataagcaagga
gagaaggaactcattctgcagactgaagggataaaccttgcggagctgttcagatactct
gatattttggacctgaacagactttattccaatgatattcatgccatggctaagaattat
ggaattgagtctgccctgagggtgattataaaggaaataaaagatgtatttgctgtatat
ggaattgtggtagaccctcggcacctttcacttgtggcagattacatgtgttttgaagga
ttttataaaccgctgaatcgttttggaattcagtccaactcctcccctctgcaacagatg
acatttgaaaccagctacaaattcttgaaggaagcaacaatgatgggtgcccatgatgaa
ctgcgatccccttctgcatgcctagtggttggaaaagttgttaaaggagggactggtttg
tttgacctcaagcaacccctcacatag

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