Entry |
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Symbol |
POLR1A
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Name |
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
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KO |
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Organism |
cboy Ciconia boyciana (Oriental stork)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:cboy00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
140651610 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:cboy03021]
140651610 (POLR1A)
Enzymes [BR:cboy01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
140651610 (POLR1A)
Transcription machinery [BR:cboy03021]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
140651610 (POLR1A)
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
5:7109188..7148647
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AA seq |
1708 aa
MRPPKVVPWRRLVGVSFGMYTAEEIRKLSVKLITNPQYLDNVGNPAINGLYDLALGPPDS
KEVCATCMQNFSNCPGHFGHIELPVTVYNPLFFDKLYLLIRGSCLNCHMLTCTRAVVHLL
LSQLKVLEKGLLHAVHDLEVILNRFLEQCADATGSEIEEELNHHVNEILQSHQIRDHCSN
VKNVCECRNKLIAQFWKAHMSSKKCPNCKSRRSLVRKEHNSKLTVTYPSTVYHKSGEEGI
LDEPAAIDESQLGKRGYLTPMTTKEYILALWKNEGFFLRYLLSGMDPHESSGFSPDMFFL
DLLVVPPSRYRPINRVGDRLFTNGQTVNLQAVMKDAKMIRKLLVFMAKEQCQPIKIAEEE
IQTETGENNEPLDHSVLTMIPGQTIADKLYNAWIRLQSHVNIVFDSDMDKLMTEKYPGIR
QLLEKKEGLFRKHMMGKRVDFAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVK
ELRQAVINGPKVHPGASMVINEDGSRTVLSASSLTQREAIAKQLLTPSSGAPQTGLKIVC
RHIKNGDVLLLNRQPTLHRPSIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFP
QSELGRAEAYTLAFTDEQYLVPKDGKPLPGLIQDHMISGVSMTVRGCFFTREQYMELVYR
GLTDKKGRIKIFPPAIMKPQQLWTGKQVVSTLLINIIPENHIPLNLTGKAKIGGRAWVKG
PANRCPNLDSMCESQVIIRNGELLCGVLDKAHFGSSAYGLVHCCYEIYGGETSGKALTCL
GRLFTAYLQLYRGFTMGIEDILVKPEADYKRQKIIEKSRQCGVEAVRAALNLPETASCEE
VQGKWQDAHLRKDQRDFNMVDVKFKEEVNSYNNEVNKVCMPFGLHRRFPENNLQLMVQSG
AKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFQPYDFSPSSGGFVTGRFLTGIKP
SEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGE
DGLDIPKTQFLQPKQFPFIAENYEVIQKTNHLDEALAKMESHQANQQFKAIKKWRARHQN
SVQREGGFLLFSQKKMASVKAQIPGGEIKNGRDPATLQLLKMWYELDEKKRRKYLKKANR
CPDPSLGVWRPDTYFASVSETFENGVEDYINKWESENRRSYMRLALSSDRLKDLLYLKWQ
RSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKT
PTMSVPVFNTKKALKKVKQLKKQLTRVCLAEVLQKVEIEESLHVKCKQNKHHLYKVKFHF
LPHEYYREEKCVKPREILHFMETRFFKIFLEAIKRKNAKMTSFTEVSTRKATQKDVDGDH
DKTQNNQEAPAEEEENIVDAEADEGDGDATEAKRRKNQEEEVDYESEEENGEESIDENLE
DEEAESEKEERTPGAEDQIGADDDESQHLSFMSQTKKEKARLLQSAELRVNAVLDSHPSI
QDYVFDTENELWCEVSLALPLMKVHFDLSSLLVSLARSTVIHEVKGITRCLLNESTNKQG
EKELILQTEGINLAELFRYSDILDLNRLYSNDIHAMAKNYGIESALRVIIKEIKDVFAVY
GIVVDPRHLSLVADYMCFEGFYKPLNRFGIQSNSSPLQQMTFETSYKFLKEATMMGAHDE
LRSPSACLVVGKVVKGGTGLFDLKQPLT |
NT seq |
5127 nt +upstreamnt +downstreamnt
atgaggccgccgaaagtagtgccgtggcggcggctggttggggtctccttcgggatgtac
acggccgaggagatcaggaaactgagtgtaaaactcataacaaatcctcagtatttggat
aatgtgggaaatccagccattaatggactgtacgacttggctttgggacctccagactcc
aaagaagtgtgtgcaacttgcatgcagaacttcagcaactgccctggccattttggccat
atagaactgcctgtgactgtctacaaccccctgttttttgataaattataccttctaatt
cgaggttcttgtttaaattgtcacatgctgacatgtactcgagctgtggttcacttactg
ctaagtcagctgaaggttctggaaaaagggttacttcatgccgtccacgatcttgaagtc
attctgaacaggtttttagagcaatgtgcagatgcaacaggttcagaaattgaagaagag
ttaaatcaccatgttaatgaaatattacaaagtcatcaaataagagatcactgttcaaat
gtaaaaaatgtatgcgagtgtagaaataaactgatagcacagttctggaaagcacatatg
agttcaaagaaatgcccaaactgcaaatctaggagatcactagtgcgaaaagagcataac
agcaagctgacagtaacctatccttctacagtgtaccataagtcaggagaggaaggcatc
ctggatgagccagcagctattgatgaaagccaattagggaagagaggatacctgacacca
atgactaccaaggaatacatcctggctctgtggaagaatgaaggtttctttttgcgttat
ctcttgtctgggatggatccccatgagagttcgggattcagtccagacatgtttttttta
gatctacttgtggttccaccttcaaggtatcgtcccataaatcgcgttggagaccgactg
tttacaaatggtcagacggtgaacttgcaggctgtcatgaaagatgccaaaatgatccgg
aagctcttggttttcatggcaaaagaacaatgtcagccaataaaaattgcagaagaagaa
atccaaacagagacaggagagaataatgaacctctggaccattctgtcctgacaatgatt
ccaggacagaccattgcagataagctgtacaacgcttggattcgtcttcagagccatgtc
aacattgtatttgatagtgacatggacaaactaatgacagaaaaataccctggtattcgt
cagctattagagaaaaaggaaggactgttccgcaagcacatgatgggaaagcgtgtggat
tttgctgctcgatcagtcatttgccccgatatgtacattggtaccaatgagattggcatt
cctatggtatttgctaccaaactgacttaccctcagccagtcactccctggaatgtcaaa
gagctgaggcaggctgtcataaatggcccaaaggttcaccctggggcctccatggtcatt
aatgaagatggatctcgtacagtgttgagtgcaagcagcctgacccagagggaagccata
gctaagcagctcctcactccttcttcaggcgcgccccagacaggactgaagattgtatgt
cgacatattaaaaacggagatgtccttctactgaaccgtcagcccactcttcatagaccc
tccatccaagctcaccgggcccgaatcctgcctggagaaaaagtgctgaggcttcactat
gccaactgtaaggcttacaatgctgattttgacggtgatgaaatgaacgcccattttcca
cagagtgagctgggtagagcagaagcctataccttagcctttactgatgaacagtatctg
gttccaaaggatgggaagccacttcctggcttgatccaggatcacatgatttctggagtt
agcatgacagtccggggctgcttttttaccagagagcaatatatggagcttgtttaccga
ggactaacagacaaaaaaggaagaattaaaatctttcctcctgccattatgaaaccacag
caattatggacaggaaagcaggttgtttctacattgttaataaacataattccagaaaac
cacatcccactgaatttgactgggaaagctaagattggtggaagagcctgggtaaaggga
cctgcaaacagatgtccaaatcttgattcaatgtgtgaatctcaggttattattagaaat
ggggaattactgtgtggtgtcttggacaaagctcactttggcagctctgcctatggcctg
gtccattgttgctatgaaatctatggaggtgaaaccagtgggaaagcactaacatgtcta
ggacgcctctttactgcttatctgcagctgtacaggggatttacaatggggattgaagat
attttggttaaacctgaagcagactacaaaagacaaaaaatcattgaaaagtcaaggcag
tgtggtgttgaagctgttagagctgctcttaatttgccagaaacagcatcatgtgaggag
gttcaagggaaatggcaggatgcccatctccgcaaagaccagagggattttaacatggtt
gatgtgaaattcaaggaggaagtaaacagttacaacaatgaagttaacaaggtttgtatg
ccctttggtctccacaggagattcccagagaacaatttgcaattgatggtacagtcagga
gccaaaggatccactgtaaatacgatgcagatttcttgtttgctgggccagattgagttg
gaagggcgaagacccccactgatggcatctggcaaatcgctgccatgtttccagccttat
gatttttcccctagttcaggaggatttgtgactggaagatttctcactgggatcaaacct
tctgaattcttctttcactgcatggctggcagggaaggtctcgtggacacagctgtcaaa
accagccgttctgggtacctacaaaggtgtatcataaagcatttggaaggactggtagtt
cagtatgatctgactgtacgagatagtgatggcagtgtggtgcagtttctgtatggagaa
gatgggcttgatatccctaaaactcagttcttacaacccaagcagtttcctttcattgca
gaaaactatgaggtaatccagaagacaaaccatctggatgaagctttagcaaagatggag
tctcaccaagctaaccagcagttcaaagccattaaaaagtggcgagccaggcaccaaaac
tctgtgcaaagagaaggaggttttctgttgttttctcaaaagaaaatggcaagtgtaaaa
gcacagattccaggaggagaaatcaaaaatggaagagatcctgctactttacagttattg
aagatgtggtatgaactagatgagaagaaacggagaaagtatctgaagaaggcaaatagg
tgtcctgacccaagccttggtgtttggcgtccagatacttattttgcatctgtttcagaa
acatttgaaaatggagttgaagattatatcaacaaatgggaatctgagaacagacgaagc
tatatgcgcctagccctttcttctgatagattaaaggatttgttgtatttaaagtggcag
cgatctctttgtgacccaggagaagctgtgggtcttcttgcagctcagagtattggggaa
ccttccacccagatgactctgaacaccttccactttgctggcagaggtgaaatgaatgtc
acattaggtattccaaggttgcgggaaatattgatggtagccagtgcaaatattaaaacg
ccaacgatgagtgttcctgtgttcaataccaagaaagctctcaagaaggtgaaacagctt
aagaaacagctcacaagagtgtgcttagctgaggtcttgcagaaggttgagatagaggaa
tccctgcatgtgaagtgcaagcagaacaaacatcacctctacaaagtaaaattccatttc
ttgccccatgaatattaccgagaggagaagtgtgtgaagcccagggagatcttgcacttc
atggaaacaaggttctttaaaatttttctggaagcaattaaaaggaagaatgcaaagatg
acatcttttactgaagtcagcacccggaaggcaactcagaaagatgtagatggtgaccat
gacaagacacagaataatcaggaggctccagcagaggaagaagagaacattgttgacgca
gaagctgatgaaggggatggcgacgctacagaagcaaaacggagaaagaaccaagaagaa
gaggttgattatgagagtgaagaagagaatggggaagaaagcattgatgagaatctagaa
gatgaagaggctgaatcagaaaaagaagaaaggactcccggtgcagaagatcagatcgga
gcggatgatgatgaatctcaacatctttccttcatgtctcagactaaaaaagagaaagct
cgattacttcagtcagcagaattgcgagtaaatgctgttctggacagccacccctcaata
caggattacgtgtttgacactgaaaatgaactttggtgtgaggtttcattggcacttccg
ttgatgaaggtgcactttgatctctcctccttgcttgtctctcttgcacgaagcacagtc
attcatgaagtgaaggggatcacgcgatgcttgttgaatgaaagtaccaataagcaagga
gagaaggaactcattctgcagactgaagggataaaccttgcggagctgttcagatactct
gatattttggacctgaacagactttattccaatgatattcatgccatggctaagaattat
ggaattgagtctgccctgagggtgattataaaggaaataaaagatgtatttgctgtatat
ggaattgtggtagaccctcggcacctttcacttgtggcagattacatgtgttttgaagga
ttttataaaccgctgaatcgttttggaattcagtccaactcctcccctctgcaacagatg
acatttgaaaccagctacaaattcttgaaggaagcaacaatgatgggtgcccatgatgaa
ctgcgatccccttctgcatgcctagtggttggaaaagttgttaaaggagggactggtttg
tttgacctcaagcaacccctcacatag |